EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000012844 (Gene tree)
Gene ID: 113153198
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 4213 bases
Position: chrOOHO01000017.1:33198259-33202471
Accession: 113153198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000018437	RRM_1	PF00076.22	3.4e-39	1	2
ENSATEP00000018437	RRM_1	PF00076.22	3.4e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000018748	-	1746	-	ENSATEP00000018437	403 (aa)	XP_026202485	UPI000E46339F

Gene Model

Click here to download ENSATEG00000012844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000012844's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000012844	sf3b4	76	81.562	ENSG00000143368	SF3B4	98	96.791	Homo_sapiens
ENSATEG00000012844	sf3b4	100	96.278	ENSAPOG00000017647	sf3b4	100	96.278	Acanthochromis_polyacanthus
ENSATEG00000012844	sf3b4	60	96.250	ENSAMEG00000010073	SF3B4	57	96.250	Ailuropoda_melanoleuca
ENSATEG00000012844	sf3b4	100	96.278	ENSAOCG00000019801	sf3b4	100	96.278	Amphiprion_ocellaris
ENSATEG00000012844	sf3b4	100	96.278	ENSAPEG00000010365	sf3b4	100	96.278	Amphiprion_percula
ENSATEG00000012844	sf3b4	53	100.000	ENSACAG00000010019	SF3B4	55	98.253	Anolis_carolinensis
ENSATEG00000012844	sf3b4	76	81.562	ENSANAG00000031025	SF3B4	57	96.250	Aotus_nancymaae
ENSATEG00000012844	sf3b4	67	95.522	ENSACLG00000014260	sf3b4	60	97.917	Astatotilapia_calliptera
ENSATEG00000012844	sf3b4	60	97.500	ENSAMXG00000008282	sf3b4	60	97.500	Astyanax_mexicanus
ENSATEG00000012844	sf3b4	53	94.393	ENSBTAG00000012793	-	53	94.393	Bos_taurus
ENSATEG00000012844	sf3b4	60	96.250	ENSBTAG00000012495	SF3B4	57	96.250	Bos_taurus
ENSATEG00000012844	sf3b4	63	72.835	WBGene00004723	sap-49	54	81.991	Caenorhabditis_elegans
ENSATEG00000012844	sf3b4	60	96.250	ENSCAFG00000011617	SF3B4	57	96.250	Canis_familiaris
ENSATEG00000012844	sf3b4	60	96.250	ENSCAFG00020019775	SF3B4	57	96.250	Canis_lupus_dingo
ENSATEG00000012844	sf3b4	60	96.250	ENSCHIG00000025663	-	57	96.250	Capra_hircus
ENSATEG00000012844	sf3b4	76	81.562	ENSTSYG00000009295	SF3B4	57	96.250	Carlito_syrichta
ENSATEG00000012844	sf3b4	60	96.250	ENSCPOG00000008267	SF3B4	57	96.250	Cavia_porcellus
ENSATEG00000012844	sf3b4	76	81.562	ENSCATG00000033114	SF3B4	57	96.250	Cercocebus_atys
ENSATEG00000012844	sf3b4	60	96.250	ENSCLAG00000015851	SF3B4	57	96.250	Chinchilla_lanigera
ENSATEG00000012844	sf3b4	76	81.562	ENSCSAG00000018129	SF3B4	57	96.250	Chlorocebus_sabaeus
ENSATEG00000012844	sf3b4	53	100.000	ENSCPBG00000008041	SF3B4	55	98.253	Chrysemys_picta_bellii
ENSATEG00000012844	sf3b4	56	88.393	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSATEG00000012844	sf3b4	52	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSATEG00000012844	sf3b4	76	81.562	ENSCANG00000035579	SF3B4	57	96.250	Colobus_angolensis_palliatus
ENSATEG00000012844	sf3b4	60	96.250	ENSCGRG00001003590	Sf3b4	57	96.250	Cricetulus_griseus_chok1gshd
ENSATEG00000012844	sf3b4	60	96.250	ENSCGRG00000016914	Sf3b4	57	96.250	Cricetulus_griseus_crigri
ENSATEG00000012844	sf3b4	66	96.617	ENSCVAG00000005536	sf3b4	59	96.522	Cyprinodon_variegatus
ENSATEG00000012844	sf3b4	60	98.333	ENSDARG00000018574	sf3b4	60	98.333	Danio_rerio
ENSATEG00000012844	sf3b4	97	65.835	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSATEG00000012844	sf3b4	58	90.948	ENSDNOG00000048908	-	56	90.948	Dasypus_novemcinctus
ENSATEG00000012844	sf3b4	60	96.250	ENSDORG00000016366	Sf3b4	57	96.250	Dipodomys_ordii
ENSATEG00000012844	sf3b4	57	87.719	ENSETEG00000008963	SF3B4	54	87.391	Echinops_telfairi
ENSATEG00000012844	sf3b4	60	96.250	ENSEASG00005001477	SF3B4	57	96.250	Equus_asinus_asinus
ENSATEG00000012844	sf3b4	60	96.250	ENSECAG00000024737	SF3B4	57	96.250	Equus_caballus
ENSATEG00000012844	sf3b4	87	91.453	ENSELUG00000012876	sf3b4	67	97.059	Esox_lucius
ENSATEG00000012844	sf3b4	60	96.250	ENSFCAG00000010106	SF3B4	57	96.250	Felis_catus
ENSATEG00000012844	sf3b4	60	96.250	ENSFDAG00000009286	SF3B4	57	96.250	Fukomys_damarensis
ENSATEG00000012844	sf3b4	57	98.690	ENSGMOG00000002519	sf3b4	67	98.261	Gadus_morhua
ENSATEG00000012844	sf3b4	53	100.000	ENSGALG00000013352	SF3B4	55	98.690	Gallus_gallus
ENSATEG00000012844	sf3b4	66	96.992	ENSGAFG00000010181	sf3b4	61	98.750	Gambusia_affinis
ENSATEG00000012844	sf3b4	56	100.000	ENSGACG00000003819	sf3b4	58	99.565	Gasterosteus_aculeatus
ENSATEG00000012844	sf3b4	76	81.562	ENSGGOG00000004761	SF3B4	57	96.250	Gorilla_gorilla
ENSATEG00000012844	sf3b4	76	70.382	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSATEG00000012844	sf3b4	67	95.522	ENSHBUG00000002028	sf3b4	60	97.917	Haplochromis_burtoni
ENSATEG00000012844	sf3b4	60	96.250	ENSHGLG00000012360	SF3B4	57	96.250	Heterocephalus_glaber_female
ENSATEG00000012844	sf3b4	60	96.250	ENSHGLG00100008533	SF3B4	57	96.250	Heterocephalus_glaber_male
ENSATEG00000012844	sf3b4	99	85.149	ENSHCOG00000003014	sf3b4	57	97.380	Hippocampus_comes
ENSATEG00000012844	sf3b4	60	98.750	ENSIPUG00000012242	Sf3b4	60	98.750	Ictalurus_punctatus
ENSATEG00000012844	sf3b4	60	96.250	ENSSTOG00000000684	-	57	96.250	Ictidomys_tridecemlineatus
ENSATEG00000012844	sf3b4	59	70.748	ENSJJAG00000022500	Sf3b4	59	70.748	Jaculus_jaculus
ENSATEG00000012844	sf3b4	66	96.629	ENSKMAG00000008154	sf3b4	62	98.354	Kryptolebias_marmoratus
ENSATEG00000012844	sf3b4	58	98.283	ENSLBEG00000026818	sf3b4	58	99.130	Labrus_bergylta
ENSATEG00000012844	sf3b4	60	94.583	ENSLACG00000004436	SF3B4	66	94.583	Latimeria_chalumnae
ENSATEG00000012844	sf3b4	57	99.563	ENSLOCG00000009048	sf3b4	54	99.563	Lepisosteus_oculatus
ENSATEG00000012844	sf3b4	76	80.062	ENSLAFG00000008531	SF3B4	56	96.250	Loxodonta_africana
ENSATEG00000012844	sf3b4	93	60.052	ENSMFAG00000039067	-	58	78.802	Macaca_fascicularis
ENSATEG00000012844	sf3b4	76	81.562	ENSMFAG00000042395	SF3B4	57	96.250	Macaca_fascicularis
ENSATEG00000012844	sf3b4	76	81.562	ENSMMUG00000007256	SF3B4	57	96.250	Macaca_mulatta
ENSATEG00000012844	sf3b4	93	59.536	ENSMNEG00000031526	-	58	78.341	Macaca_nemestrina
ENSATEG00000012844	sf3b4	76	81.562	ENSMNEG00000031839	SF3B4	57	96.250	Macaca_nemestrina
ENSATEG00000012844	sf3b4	76	81.562	ENSMLEG00000038667	SF3B4	57	96.250	Mandrillus_leucophaeus
ENSATEG00000012844	sf3b4	81	96.037	ENSMAMG00000014692	sf3b4	99	95.970	Mastacembelus_armatus
ENSATEG00000012844	sf3b4	67	95.522	ENSMZEG00005026741	sf3b4	60	97.917	Maylandia_zebra
ENSATEG00000012844	sf3b4	53	100.000	ENSMGAG00000000653	SF3B4	55	98.690	Meleagris_gallopavo
ENSATEG00000012844	sf3b4	60	96.250	ENSMAUG00000015266	Sf3b4	57	96.250	Mesocricetus_auratus
ENSATEG00000012844	sf3b4	60	96.250	ENSMICG00000044961	SF3B4	57	96.250	Microcebus_murinus
ENSATEG00000012844	sf3b4	92	72.165	ENSMOCG00000014155	-	57	93.939	Microtus_ochrogaster
ENSATEG00000012844	sf3b4	60	96.250	ENSMOCG00000013658	-	57	96.250	Microtus_ochrogaster
ENSATEG00000012844	sf3b4	57	98.696	ENSMMOG00000018032	sf3b4	59	98.696	Mola_mola
ENSATEG00000012844	sf3b4	76	81.562	ENSMODG00000018767	SF3B4	57	96.250	Monodelphis_domestica
ENSATEG00000012844	sf3b4	81	94.512	ENSMALG00000006174	sf3b4	100	93.797	Monopterus_albus
ENSATEG00000012844	sf3b4	60	96.250	MGP_CAROLIEiJ_G0025365	Sf3b4	57	96.250	Mus_caroli
ENSATEG00000012844	sf3b4	60	96.250	ENSMUSG00000068856	Sf3b4	57	96.250	Mus_musculus
ENSATEG00000012844	sf3b4	60	96.250	MGP_PahariEiJ_G0026809	Sf3b4	57	96.250	Mus_pahari
ENSATEG00000012844	sf3b4	60	96.250	MGP_SPRETEiJ_G0026309	Sf3b4	57	96.250	Mus_spretus
ENSATEG00000012844	sf3b4	60	96.250	ENSMPUG00000005563	SF3B4	57	96.250	Mustela_putorius_furo
ENSATEG00000012844	sf3b4	60	96.667	ENSMLUG00000010789	SF3B4	57	96.667	Myotis_lucifugus
ENSATEG00000012844	sf3b4	76	80.312	ENSNGAG00000016337	Sf3b4	57	96.250	Nannospalax_galili
ENSATEG00000012844	sf3b4	67	96.269	ENSNBRG00000013865	sf3b4	60	98.333	Neolamprologus_brichardi
ENSATEG00000012844	sf3b4	96	67.595	ENSNLEG00000000537	-	58	88.261	Nomascus_leucogenys
ENSATEG00000012844	sf3b4	57	93.421	ENSOPRG00000010808	SF3B4	54	93.043	Ochotona_princeps
ENSATEG00000012844	sf3b4	91	57.937	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSATEG00000012844	sf3b4	75	68.966	ENSODEG00000003597	-	59	80.083	Octodon_degus
ENSATEG00000012844	sf3b4	67	95.149	ENSONIG00000002730	sf3b4	68	95.221	Oreochromis_niloticus
ENSATEG00000012844	sf3b4	65	71.642	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSATEG00000012844	sf3b4	60	96.250	ENSOCUG00000004614	SF3B4	57	96.250	Oryctolagus_cuniculus
ENSATEG00000012844	sf3b4	86	84.900	ENSORLG00000003062	sf3b4	59	98.261	Oryzias_latipes
ENSATEG00000012844	sf3b4	74	85.762	ENSORLG00020000687	sf3b4	58	98.261	Oryzias_latipes_hni
ENSATEG00000012844	sf3b4	74	85.762	ENSORLG00015010989	sf3b4	58	98.261	Oryzias_latipes_hsok
ENSATEG00000012844	sf3b4	58	97.414	ENSOMEG00000013694	sf3b4	58	98.261	Oryzias_melastigma
ENSATEG00000012844	sf3b4	60	96.250	ENSOGAG00000006265	SF3B4	57	96.250	Otolemur_garnettii
ENSATEG00000012844	sf3b4	76	71.336	ENSOARG00000007368	-	55	80.973	Ovis_aries
ENSATEG00000012844	sf3b4	60	96.250	ENSOARG00000020718	-	57	96.250	Ovis_aries
ENSATEG00000012844	sf3b4	76	76.752	ENSPPAG00000030024	-	59	86.250	Pan_paniscus
ENSATEG00000012844	sf3b4	76	81.562	ENSPPAG00000040904	SF3B4	57	96.250	Pan_paniscus
ENSATEG00000012844	sf3b4	60	96.250	ENSPPRG00000007384	SF3B4	57	96.250	Panthera_pardus
ENSATEG00000012844	sf3b4	60	96.250	ENSPTIG00000014530	SF3B4	57	96.250	Panthera_tigris_altaica
ENSATEG00000012844	sf3b4	76	81.562	ENSPTRG00000001243	SF3B4	57	96.250	Pan_troglodytes
ENSATEG00000012844	sf3b4	76	77.346	ENSPTRG00000049727	-	60	86.667	Pan_troglodytes
ENSATEG00000012844	sf3b4	76	81.562	ENSPANG00000005126	SF3B4	57	96.250	Papio_anubis
ENSATEG00000012844	sf3b4	60	97.531	ENSPKIG00000020669	sf3b4	72	96.324	Paramormyrops_kingsleyae
ENSATEG00000012844	sf3b4	60	96.250	ENSPEMG00000017568	Sf3b4	57	96.250	Peromyscus_maniculatus_bairdii
ENSATEG00000012844	sf3b4	53	95.305	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSATEG00000012844	sf3b4	76	81.562	ENSPCIG00000008765	SF3B4	57	96.250	Phascolarctos_cinereus
ENSATEG00000012844	sf3b4	66	97.753	ENSPFOG00000005754	sf3b4	62	99.177	Poecilia_formosa
ENSATEG00000012844	sf3b4	66	97.753	ENSPLAG00000001401	sf3b4	67	99.177	Poecilia_latipinna
ENSATEG00000012844	sf3b4	66	97.753	ENSPREG00000011076	sf3b4	60	99.177	Poecilia_reticulata
ENSATEG00000012844	sf3b4	52	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSATEG00000012844	sf3b4	60	96.250	ENSPCOG00000015399	SF3B4	57	96.250	Propithecus_coquereli
ENSATEG00000012844	sf3b4	60	96.250	ENSPVAG00000014171	SF3B4	57	96.250	Pteropus_vampyrus
ENSATEG00000012844	sf3b4	67	95.522	ENSPNYG00000012700	sf3b4	60	97.917	Pundamilia_nyererei
ENSATEG00000012844	sf3b4	69	94.604	ENSPNAG00000000686	sf3b4	61	97.500	Pygocentrus_nattereri
ENSATEG00000012844	sf3b4	60	96.250	ENSRNOG00000021181	Sf3b4	57	96.250	Rattus_norvegicus
ENSATEG00000012844	sf3b4	76	81.562	ENSRBIG00000043392	SF3B4	57	96.250	Rhinopithecus_bieti
ENSATEG00000012844	sf3b4	92	59.631	ENSRROG00000028213	-	56	73.874	Rhinopithecus_roxellana
ENSATEG00000012844	sf3b4	76	81.562	ENSRROG00000029366	SF3B4	57	96.250	Rhinopithecus_roxellana
ENSATEG00000012844	sf3b4	76	81.250	ENSSBOG00000012310	-	57	95.833	Saimiri_boliviensis_boliviensis
ENSATEG00000012844	sf3b4	76	78.125	ENSSHAG00000004043	SF3B4	56	91.667	Sarcophilus_harrisii
ENSATEG00000012844	sf3b4	60	97.119	ENSSFOG00015008864	sf3b4	67	95.956	Scleropages_formosus
ENSATEG00000012844	sf3b4	85	93.567	ENSSMAG00000006837	sf3b4	68	97.778	Scophthalmus_maximus
ENSATEG00000012844	sf3b4	100	96.526	ENSSDUG00000012064	sf3b4	100	96.526	Seriola_dumerili
ENSATEG00000012844	sf3b4	100	96.774	ENSSLDG00000014226	sf3b4	100	96.774	Seriola_lalandi_dorsalis
ENSATEG00000012844	sf3b4	72	96.564	ENSSPAG00000019219	sf3b4	72	96.564	Stegastes_partitus
ENSATEG00000012844	sf3b4	76	80.312	ENSSSCG00000006665	-	57	96.250	Sus_scrofa
ENSATEG00000012844	sf3b4	60	94.628	ENSTGUG00000004470	SF3B4	91	97.826	Taeniopygia_guttata
ENSATEG00000012844	sf3b4	79	89.655	ENSTRUG00000004516	sf3b4	58	98.261	Takifugu_rubripes
ENSATEG00000012844	sf3b4	57	98.690	ENSTNIG00000009156	sf3b4	59	98.261	Tetraodon_nigroviridis
ENSATEG00000012844	sf3b4	60	96.250	ENSTTRG00000005217	SF3B4	57	96.250	Tursiops_truncatus
ENSATEG00000012844	sf3b4	60	96.250	ENSUAMG00000022468	SF3B4	57	96.250	Ursus_americanus
ENSATEG00000012844	sf3b4	60	96.250	ENSUMAG00000003802	SF3B4	57	96.250	Ursus_maritimus
ENSATEG00000012844	sf3b4	57	96.053	ENSVPAG00000008152	SF3B4	55	96.053	Vicugna_pacos
ENSATEG00000012844	sf3b4	60	96.250	ENSVVUG00000007732	-	61	96.250	Vulpes_vulpes
ENSATEG00000012844	sf3b4	76	82.951	ENSXETG00000011038	sf3b4	53	100.000	Xenopus_tropicalis
ENSATEG00000012844	sf3b4	66	97.378	ENSXCOG00000019895	sf3b4	62	98.765	Xiphophorus_couchianus
ENSATEG00000012844	sf3b4	66	97.368	ENSXMAG00000003772	sf3b4	62	98.765	Xiphophorus_maculatus