EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000012894 (Gene tree)
Gene ID: 113161988
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 10574 bases
Position: chrOOHO01000002.1:9141314-9151887
Accession: 113161988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000018635	ResIII	PF04851.15	3.9e-11	1	1
ENSATEP00000018607	ResIII	PF04851.15	5.2e-11	1	1
ENSATEP00000018635	DEAD	PF00270.29	6.1e-06	1	1
ENSATEP00000018607	DEAD	PF00270.29	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000018948	-	3063	-	ENSATEP00000018635	1020 (aa)	-	-
ENSATET00000018919	-	5228	-	ENSATEP00000018607	1035 (aa)	XP_026215677	UPI000E45F699

Gene Model

Click here to download ENSATEG00000012894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000012894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000012894	smarca5	64	36.093	ENSATEG00000008107	hells	98	36.093
ENSATEG00000012894	smarca5	53	42.674	ENSATEG00000013058	chd1l	58	42.279
ENSATEG00000012894	smarca5	50	34.331	ENSATEG00000012969	ercc6l	51	34.331

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000012894	smarca5	94	83.714	ENSG00000102038	SMARCA1	97	79.550	Homo_sapiens
ENSATEG00000012894	smarca5	100	98.069	ENSAPOG00000016035	smarca5	100	98.069	Acanthochromis_polyacanthus
ENSATEG00000012894	smarca5	95	81.737	ENSAMEG00000015218	SMARCA1	93	82.294	Ailuropoda_melanoleuca
ENSATEG00000012894	smarca5	87	98.113	ENSACIG00000016982	smarca5	100	98.113	Amphilophus_citrinellus
ENSATEG00000012894	smarca5	100	98.069	ENSAOCG00000015578	smarca5	100	98.069	Amphiprion_ocellaris
ENSATEG00000012894	smarca5	100	98.069	ENSAPEG00000011117	smarca5	100	98.069	Amphiprion_percula
ENSATEG00000012894	smarca5	95	83.910	ENSAPLG00000013149	SMARCA1	99	83.910	Anas_platyrhynchos
ENSATEG00000012894	smarca5	98	81.863	ENSACAG00000011376	SMARCA1	97	82.087	Anolis_carolinensis
ENSATEG00000012894	smarca5	95	77.879	ENSANAG00000023098	SMARCA1	93	78.513	Aotus_nancymaae
ENSATEG00000012894	smarca5	100	97.780	ENSACLG00000025356	smarca5	100	97.780	Astatotilapia_calliptera
ENSATEG00000012894	smarca5	90	85.590	ENSAMXG00000011227	smarca1	99	86.128	Astyanax_mexicanus
ENSATEG00000012894	smarca5	100	91.723	ENSAMXG00000005709	smarca5	100	91.321	Astyanax_mexicanus
ENSATEG00000012894	smarca5	95	82.977	ENSBTAG00000002292	SMARCA1	91	83.351	Bos_taurus
ENSATEG00000012894	smarca5	97	62.919	WBGene00002169	isw-1	95	63.983	Caenorhabditis_elegans
ENSATEG00000012894	smarca5	95	82.846	ENSCJAG00000002868	SMARCA1	93	83.299	Callithrix_jacchus
ENSATEG00000012894	smarca5	95	73.486	ENSCAFG00000018673	SMARCA1	99	75.293	Canis_familiaris
ENSATEG00000012894	smarca5	95	82.828	ENSCAFG00020001751	SMARCA1	93	83.401	Canis_lupus_dingo
ENSATEG00000012894	smarca5	95	82.675	ENSCHIG00000009837	SMARCA1	95	80.578	Capra_hircus
ENSATEG00000012894	smarca5	98	80.019	ENSTSYG00000004240	SMARCA1	95	84.470	Carlito_syrichta
ENSATEG00000012894	smarca5	93	83.966	ENSCPOG00000013601	SMARCA1	97	79.487	Cavia_porcellus
ENSATEG00000012894	smarca5	94	81.017	ENSCCAG00000030817	SMARCA1	93	80.652	Cebus_capucinus
ENSATEG00000012894	smarca5	95	83.213	ENSCATG00000015921	SMARCA1	97	80.495	Cercocebus_atys
ENSATEG00000012894	smarca5	95	81.919	ENSCLAG00000002171	SMARCA1	93	82.485	Chinchilla_lanigera
ENSATEG00000012894	smarca5	94	83.714	ENSCSAG00000008460	SMARCA1	93	83.299	Chlorocebus_sabaeus
ENSATEG00000012894	smarca5	93	85.835	ENSCPBG00000001146	SMARCA1	93	84.114	Chrysemys_picta_bellii
ENSATEG00000012894	smarca5	96	73.658	ENSCING00000004110	swi/snf	99	73.658	Ciona_intestinalis
ENSATEG00000012894	smarca5	96	72.898	ENSCSAVG00000004620	-	99	75.391	Ciona_savignyi
ENSATEG00000012894	smarca5	94	83.817	ENSCANG00000007183	SMARCA1	93	83.401	Colobus_angolensis_palliatus
ENSATEG00000012894	smarca5	93	83.738	ENSCGRG00001010776	Smarca1	97	78.571	Cricetulus_griseus_chok1gshd
ENSATEG00000012894	smarca5	95	81.358	ENSCGRG00000015301	Smarca1	95	83.019	Cricetulus_griseus_crigri
ENSATEG00000012894	smarca5	100	97.005	ENSCSEG00000000328	smarca5	100	97.005	Cynoglossus_semilaevis
ENSATEG00000012894	smarca5	100	96.715	ENSCVAG00000008668	smarca5	100	96.715	Cyprinodon_variegatus
ENSATEG00000012894	smarca5	100	91.522	ENSDARG00000052348	smarca5	100	91.023	Danio_rerio
ENSATEG00000012894	smarca5	94	83.640	ENSDARG00000012776	smarca1	99	81.068	Danio_rerio
ENSATEG00000012894	smarca5	95	82.551	ENSDNOG00000004315	SMARCA1	94	81.828	Dasypus_novemcinctus
ENSATEG00000012894	smarca5	96	81.690	ENSDORG00000009270	Smarca1	95	81.818	Dipodomys_ordii
ENSATEG00000012894	smarca5	93	76.576	FBgn0011604	Iswi	97	74.300	Drosophila_melanogaster
ENSATEG00000012894	smarca5	80	81.818	ENSETEG00000017426	SMARCA1	86	81.818	Echinops_telfairi
ENSATEG00000012894	smarca5	97	80.437	ENSEBUG00000001239	smarca5	99	80.437	Eptatretus_burgeri
ENSATEG00000012894	smarca5	95	78.947	ENSEASG00005008218	SMARCA1	99	79.352	Equus_asinus_asinus
ENSATEG00000012894	smarca5	95	82.727	ENSECAG00000012106	SMARCA1	92	83.299	Equus_caballus
ENSATEG00000012894	smarca5	78	84.106	ENSEEUG00000014927	SMARCA1	83	84.106	Erinaceus_europaeus
ENSATEG00000012894	smarca5	93	85.458	ENSELUG00000010515	smarca1	95	85.294	Esox_lucius
ENSATEG00000012894	smarca5	95	82.727	ENSFCAG00000018496	SMARCA1	93	83.299	Felis_catus
ENSATEG00000012894	smarca5	89	85.214	ENSFALG00000000209	SMARCA1	98	85.214	Ficedula_albicollis
ENSATEG00000012894	smarca5	95	81.587	ENSFDAG00000009818	SMARCA1	96	81.587	Fukomys_damarensis
ENSATEG00000012894	smarca5	100	95.411	ENSFHEG00000007687	smarca5	100	95.411	Fundulus_heteroclitus
ENSATEG00000012894	smarca5	96	83.148	ENSGALG00000008431	SMARCA1	95	85.162	Gallus_gallus
ENSATEG00000012894	smarca5	100	97.198	ENSGAFG00000017731	smarca5	100	97.198	Gambusia_affinis
ENSATEG00000012894	smarca5	93	85.835	ENSGAGG00000023575	SMARCA1	99	84.362	Gopherus_agassizii
ENSATEG00000012894	smarca5	70	96.000	ENSGGOG00000012841	-	93	78.582	Gorilla_gorilla
ENSATEG00000012894	smarca5	94	82.884	ENSHGLG00000003080	SMARCA1	97	78.767	Heterocephalus_glaber_female
ENSATEG00000012894	smarca5	93	83.966	ENSHGLG00100001102	SMARCA1	99	81.883	Heterocephalus_glaber_male
ENSATEG00000012894	smarca5	100	97.297	ENSHCOG00000005458	smarca5	100	97.297	Hippocampus_comes
ENSATEG00000012894	smarca5	100	90.935	ENSIPUG00000005229	SMARCA5	99	93.413	Ictalurus_punctatus
ENSATEG00000012894	smarca5	94	84.567	ENSIPUG00000016905	Smarca1	99	84.324	Ictalurus_punctatus
ENSATEG00000012894	smarca5	97	81.673	ENSSTOG00000014524	SMARCA1	97	81.294	Ictidomys_tridecemlineatus
ENSATEG00000012894	smarca5	97	80.456	ENSJJAG00000002593	Smarca1	92	83.229	Jaculus_jaculus
ENSATEG00000012894	smarca5	100	96.715	ENSKMAG00000003777	smarca5	100	96.715	Kryptolebias_marmoratus
ENSATEG00000012894	smarca5	94	96.213	ENSLBEG00000013295	SMARCA1	100	97.595	Labrus_bergylta
ENSATEG00000012894	smarca5	100	96.232	ENSLBEG00000018112	smarca5	100	96.232	Labrus_bergylta
ENSATEG00000012894	smarca5	94	85.550	ENSLACG00000016697	SMARCA1	95	85.155	Latimeria_chalumnae
ENSATEG00000012894	smarca5	94	85.789	ENSLOCG00000014591	smarca1	95	85.510	Lepisosteus_oculatus
ENSATEG00000012894	smarca5	96	81.076	ENSLAFG00000000896	SMARCA1	98	82.085	Loxodonta_africana
ENSATEG00000012894	smarca5	95	83.213	ENSMFAG00000002117	SMARCA1	99	81.138	Macaca_fascicularis
ENSATEG00000012894	smarca5	95	83.213	ENSMMUG00000008818	SMARCA1	97	85.070	Macaca_mulatta
ENSATEG00000012894	smarca5	95	83.213	ENSMNEG00000041768	SMARCA1	99	81.138	Macaca_nemestrina
ENSATEG00000012894	smarca5	94	83.714	ENSMLEG00000043198	SMARCA1	93	83.299	Mandrillus_leucophaeus
ENSATEG00000012894	smarca5	100	97.498	ENSMAMG00000014294	smarca5	100	97.498	Mastacembelus_armatus
ENSATEG00000012894	smarca5	100	97.780	ENSMZEG00005009369	smarca5	100	97.780	Maylandia_zebra
ENSATEG00000012894	smarca5	95	82.797	ENSMGAG00000007042	SMARCA1	98	82.797	Meleagris_gallopavo
ENSATEG00000012894	smarca5	93	83.124	ENSMAUG00000008133	Smarca1	97	79.310	Mesocricetus_auratus
ENSATEG00000012894	smarca5	97	81.990	ENSMICG00000015768	SMARCA1	95	81.665	Microcebus_murinus
ENSATEG00000012894	smarca5	93	83.527	ENSMOCG00000009464	Smarca1	97	78.571	Microtus_ochrogaster
ENSATEG00000012894	smarca5	96	96.576	ENSMMOG00000005547	smarca5	100	96.576	Mola_mola
ENSATEG00000012894	smarca5	93	85.322	ENSMODG00000013187	-	94	84.103	Monodelphis_domestica
ENSATEG00000012894	smarca5	100	97.300	ENSMALG00000002081	smarca5	100	97.300	Monopterus_albus
ENSATEG00000012894	smarca5	97	80.237	MGP_CAROLIEiJ_G0033034	Smarca1	96	79.960	Mus_caroli
ENSATEG00000012894	smarca5	97	80.495	ENSMUSG00000031099	Smarca1	96	80.060	Mus_musculus
ENSATEG00000012894	smarca5	96	80.658	MGP_PahariEiJ_G0031579	Smarca1	96	80.258	Mus_pahari
ENSATEG00000012894	smarca5	97	80.495	MGP_SPRETEiJ_G0034192	Smarca1	96	80.060	Mus_spretus
ENSATEG00000012894	smarca5	95	81.836	ENSMPUG00000017423	SMARCA1	88	82.394	Mustela_putorius_furo
ENSATEG00000012894	smarca5	95	80.578	ENSMLUG00000029614	SMARCA1	93	80.823	Myotis_lucifugus
ENSATEG00000012894	smarca5	93	83.648	ENSNGAG00000006492	Smarca1	95	80.843	Nannospalax_galili
ENSATEG00000012894	smarca5	96	98.290	ENSNBRG00000004463	smarca5	99	98.290	Neolamprologus_brichardi
ENSATEG00000012894	smarca5	98	80.622	ENSNLEG00000015179	SMARCA1	99	80.622	Nomascus_leucogenys
ENSATEG00000012894	smarca5	89	76.211	ENSMEUG00000008819	SMARCA1	97	76.211	Notamacropus_eugenii
ENSATEG00000012894	smarca5	96	80.259	ENSODEG00000012163	SMARCA1	95	80.259	Octodon_degus
ENSATEG00000012894	smarca5	100	97.876	ENSONIG00000009993	smarca5	100	97.876	Oreochromis_niloticus
ENSATEG00000012894	smarca5	93	86.167	ENSOANG00000002862	SMARCA1	99	84.877	Ornithorhynchus_anatinus
ENSATEG00000012894	smarca5	95	83.080	ENSOCUG00000001047	SMARCA1	93	83.401	Oryctolagus_cuniculus
ENSATEG00000012894	smarca5	100	96.439	ENSORLG00000021998	smarca5	100	96.439	Oryzias_latipes
ENSATEG00000012894	smarca5	100	96.532	ENSORLG00020017679	smarca5	100	96.532	Oryzias_latipes_hni
ENSATEG00000012894	smarca5	100	96.818	ENSORLG00015017210	smarca5	100	96.818	Oryzias_latipes_hsok
ENSATEG00000012894	smarca5	100	96.718	ENSOMEG00000000086	smarca5	100	96.718	Oryzias_melastigma
ENSATEG00000012894	smarca5	95	82.401	ENSOGAG00000004399	SMARCA1	95	80.200	Otolemur_garnettii
ENSATEG00000012894	smarca5	93	84.477	ENSOARG00000014638	SMARCA1	99	83.231	Ovis_aries
ENSATEG00000012894	smarca5	94	83.714	ENSPPAG00000034647	SMARCA1	93	83.299	Pan_paniscus
ENSATEG00000012894	smarca5	95	82.828	ENSPPRG00000008929	SMARCA1	93	83.401	Panthera_pardus
ENSATEG00000012894	smarca5	95	80.933	ENSPTIG00000000915	SMARCA1	96	81.481	Panthera_tigris_altaica
ENSATEG00000012894	smarca5	95	83.213	ENSPTRG00000049876	SMARCA1	97	80.495	Pan_troglodytes
ENSATEG00000012894	smarca5	94	83.714	ENSPANG00000003871	SMARCA1	93	83.299	Papio_anubis
ENSATEG00000012894	smarca5	93	83.699	ENSPKIG00000013411	smarca1	97	83.699	Paramormyrops_kingsleyae
ENSATEG00000012894	smarca5	93	85.835	ENSPSIG00000010101	SMARCA1	99	84.362	Pelodiscus_sinensis
ENSATEG00000012894	smarca5	93	83.438	ENSPEMG00000017503	Smarca1	95	80.642	Peromyscus_maniculatus_bairdii
ENSATEG00000012894	smarca5	94	84.529	ENSPCIG00000015460	SMARCA1	96	84.529	Phascolarctos_cinereus
ENSATEG00000012894	smarca5	100	97.391	ENSPFOG00000007649	smarca5	100	97.391	Poecilia_formosa
ENSATEG00000012894	smarca5	100	97.391	ENSPLAG00000003363	smarca5	100	97.391	Poecilia_latipinna
ENSATEG00000012894	smarca5	100	97.391	ENSPMEG00000019849	smarca5	100	97.391	Poecilia_mexicana
ENSATEG00000012894	smarca5	100	97.295	ENSPREG00000023250	smarca5	100	97.295	Poecilia_reticulata
ENSATEG00000012894	smarca5	94	80.809	ENSPPYG00000020703	SMARCA1	93	80.448	Pongo_abelii
ENSATEG00000012894	smarca5	77	76.636	ENSPCOG00000020722	SMARCA1	93	80.386	Propithecus_coquereli
ENSATEG00000012894	smarca5	88	83.355	ENSPVAG00000003805	SMARCA1	86	83.443	Pteropus_vampyrus
ENSATEG00000012894	smarca5	58	98.153	ENSPNYG00000012299	smarca5	92	98.153	Pundamilia_nyererei
ENSATEG00000012894	smarca5	97	80.597	ENSRNOG00000003762	Smarca1	93	82.179	Rattus_norvegicus
ENSATEG00000012894	smarca5	94	83.817	ENSRROG00000034167	SMARCA1	93	83.401	Rhinopithecus_roxellana
ENSATEG00000012894	smarca5	93	84.688	ENSSBOG00000020641	SMARCA1	99	83.436	Saimiri_boliviensis_boliviensis
ENSATEG00000012894	smarca5	93	80.822	ENSSHAG00000013518	SMARCA1	99	79.630	Sarcophilus_harrisii
ENSATEG00000012894	smarca5	95	92.857	ENSSFOG00015016794	smarca5	100	93.093	Scleropages_formosus
ENSATEG00000012894	smarca5	95	84.350	ENSSFOG00015009043	smarca1	96	84.521	Scleropages_formosus
ENSATEG00000012894	smarca5	100	96.432	ENSSMAG00000004801	smarca5	100	96.432	Scophthalmus_maximus
ENSATEG00000012894	smarca5	100	97.971	ENSSDUG00000020690	smarca5	100	97.971	Seriola_dumerili
ENSATEG00000012894	smarca5	100	97.971	ENSSLDG00000025190	smarca5	100	97.971	Seriola_lalandi_dorsalis
ENSATEG00000012894	smarca5	80	84.342	ENSSARG00000000842	SMARCA1	83	84.342	Sorex_araneus
ENSATEG00000012894	smarca5	96	82.613	ENSSPUG00000000590	SMARCA1	96	82.929	Sphenodon_punctatus
ENSATEG00000012894	smarca5	100	98.069	ENSSPAG00000002894	smarca5	100	98.069	Stegastes_partitus
ENSATEG00000012894	smarca5	93	84.672	ENSSSCG00000012649	SMARCA1	95	83.112	Sus_scrofa
ENSATEG00000012894	smarca5	95	83.605	ENSTGUG00000003899	-	99	83.605	Taeniopygia_guttata
ENSATEG00000012894	smarca5	100	96.329	ENSTRUG00000014094	smarca5	100	96.329	Takifugu_rubripes
ENSATEG00000012894	smarca5	98	95.276	ENSTNIG00000017717	smarca5	97	95.644	Tetraodon_nigroviridis
ENSATEG00000012894	smarca5	88	81.958	ENSTBEG00000014973	SMARCA1	91	81.958	Tupaia_belangeri
ENSATEG00000012894	smarca5	93	79.917	ENSTTRG00000006168	SMARCA1	99	78.760	Tursiops_truncatus
ENSATEG00000012894	smarca5	93	84.583	ENSUAMG00000020201	SMARCA1	93	83.096	Ursus_americanus
ENSATEG00000012894	smarca5	96	78.278	ENSUMAG00000004073	SMARCA1	98	83.693	Ursus_maritimus
ENSATEG00000012894	smarca5	75	85.266	ENSVPAG00000010492	-	77	87.543	Vicugna_pacos
ENSATEG00000012894	smarca5	95	82.828	ENSVVUG00000008878	SMARCA1	98	84.984	Vulpes_vulpes
ENSATEG00000012894	smarca5	95	83.622	ENSXETG00000001526	smarca1	98	83.947	Xenopus_tropicalis
ENSATEG00000012894	smarca5	97	97.222	ENSXCOG00000011170	smarca5	100	97.222	Xiphophorus_couchianus
ENSATEG00000012894	smarca5	100	97.101	ENSXMAG00000009678	smarca5	100	97.101	Xiphophorus_maculatus