EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSATEG00000012917 (Gene tree)
Gene ID
113154634
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Anabas_testudineus
Status
putative
Strand
Minus strand
Length
7321 bases
Position
chrOOHO01000017.1:33215239-33222559
Accession
113154634
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSATEP00000018589PABPPF00658.185.2e-3211
ENSATEP00000018589RRM_5PF13893.62.9e-0912
ENSATEP00000018589RRM_5PF13893.62.9e-0922
ENSATEP00000018589RRM_1PF00076.221.1e-9014
ENSATEP00000018589RRM_1PF00076.221.1e-9024
ENSATEP00000018589RRM_1PF00076.221.1e-9034
ENSATEP00000018589RRM_1PF00076.221.1e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSATET00000018901-2953XM_026348939ENSATEP00000018589635 (aa)XP_026204724UPI000E4629A4
Gene Model
Click here to download ENSATEG00000012917's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000012917's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSATEG00000012917pabpc1b9870.111ENSATEG00000007428pabpc1l9970.270
ENSATEG00000012917pabpc1b5632.955ENSATEG00000014593-8132.222
ENSATEG00000012917pabpc1b5937.349ENSATEG00000018073ELAVL29237.349
ENSATEG00000012917pabpc1b5334.884ENSATEG00000021942-5234.884
ENSATEG00000012917pabpc1b10089.515ENSATEG00000024852pabpc1a10089.515
ENSATEG00000012917pabpc1b5930.719ENSATEG00000020941elavl39030.719
ENSATEG00000012917pabpc1b5534.091ENSATEG00000010871celf15434.884
ENSATEG00000012917pabpc1b8036.986ENSATEG00000008884celf3a8636.986
ENSATEG00000012917pabpc1b5336.047ENSATEG00000017169-5336.905
ENSATEG00000012917pabpc1b5936.145ENSATEG00000006136elavl48736.145
ENSATEG00000012917pabpc1b5730.220ENSATEG00000008865tia1l6930.220
ENSATEG00000012917pabpc1b9975.358ENSATEG00000007402pabpc49975.513
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSATEG00000012917pabpc1b5879.082ENSG00000184388PABPC1L2B9879.082Homo_sapiens
ENSATEG00000012917pabpc1b5879.082ENSG00000186288PABPC1L2A9879.082Homo_sapiens
ENSATEG00000012917pabpc1b10090.141ENSAPOG00000015105pabpc1a10089.671Acanthochromis_polyacanthus
ENSATEG00000012917pabpc1b10097.170ENSAPOG00000017776pabpc1b10097.170Acanthochromis_polyacanthus
ENSATEG00000012917pabpc1b5979.082ENSAMEG00000019441-9879.082Ailuropoda_melanoleuca
ENSATEG00000012917pabpc1b10091.052ENSACIG00000018366pabpc1b10091.052Amphilophus_citrinellus
ENSATEG00000012917pabpc1b10089.671ENSACIG00000004685pabpc1a10089.671Amphilophus_citrinellus
ENSATEG00000012917pabpc1b10089.358ENSAOCG00000011656pabpc1a10089.358Amphiprion_ocellaris
ENSATEG00000012917pabpc1b10096.541ENSAOCG00000019839pabpc1b10096.541Amphiprion_ocellaris
ENSATEG00000012917pabpc1b10089.358ENSAPEG00000006963pabpc1a10089.358Amphiprion_percula
ENSATEG00000012917pabpc1b10096.541ENSAPEG00000010435pabpc1b10096.541Amphiprion_percula
ENSATEG00000012917pabpc1b5879.082ENSANAG00000019431-9879.082Aotus_nancymaae
ENSATEG00000012917pabpc1b5879.082ENSANAG00000019429-9879.082Aotus_nancymaae
ENSATEG00000012917pabpc1b10095.597ENSACLG00000014335pabpc1b10095.597Astatotilapia_calliptera
ENSATEG00000012917pabpc1b9990.596ENSACLG00000009399pabpc1a10090.596Astatotilapia_calliptera
ENSATEG00000012917pabpc1b10093.868ENSAMXG00000008599pabpc1b10093.868Astyanax_mexicanus
ENSATEG00000012917pabpc1b5976.077ENSBTAG00000052491-9876.077Bos_taurus
ENSATEG00000012917pabpc1b5978.049ENSBTAG00000050902-9878.049Bos_taurus
ENSATEG00000012917pabpc1b5879.082ENSCJAG00000041326-9879.082Callithrix_jacchus
ENSATEG00000012917pabpc1b5978.049ENSCAFG00020002052-9878.049Canis_lupus_dingo
ENSATEG00000012917pabpc1b5879.082ENSCHIG00000011138-9879.082Capra_hircus
ENSATEG00000012917pabpc1b5879.082ENSCHIG00000006283-9879.082Capra_hircus
ENSATEG00000012917pabpc1b5879.082ENSTSYG00000001775-9879.082Carlito_syrichta
ENSATEG00000012917pabpc1b5979.082ENSCPOG00000009525-9879.082Cavia_porcellus
ENSATEG00000012917pabpc1b5879.082ENSCCAG00000031524-9879.082Cebus_capucinus
ENSATEG00000012917pabpc1b5879.082ENSCATG00000043125-9879.082Cercocebus_atys
ENSATEG00000012917pabpc1b5879.082ENSCATG00000042826-9879.082Cercocebus_atys
ENSATEG00000012917pabpc1b5878.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSATEG00000012917pabpc1b5878.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSATEG00000012917pabpc1b5979.082ENSCSAG00000000102-9879.082Chlorocebus_sabaeus
ENSATEG00000012917pabpc1b5779.558ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSATEG00000012917pabpc1b10091.195ENSCSEG00000015241-10091.195Cynoglossus_semilaevis
ENSATEG00000012917pabpc1b9989.540ENSCSEG00000013324pabpc1a9989.540Cynoglossus_semilaevis
ENSATEG00000012917pabpc1b10089.671ENSCVAG00000021872pabpc1a10089.045Cyprinodon_variegatus
ENSATEG00000012917pabpc1b10093.407ENSCVAG00000005489pabpc1b10093.407Cyprinodon_variegatus
ENSATEG00000012917pabpc1b10090.424ENSDARG00000017219pabpc1a10090.424Danio_rerio
ENSATEG00000012917pabpc1b10094.654ENSDARG00000021140pabpc1b10095.126Danio_rerio
ENSATEG00000012917pabpc1b5979.894ENSDNOG00000030926-9877.551Dasypus_novemcinctus
ENSATEG00000012917pabpc1b5877.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSATEG00000012917pabpc1b5977.670ENSEASG00005010399-9877.670Equus_asinus_asinus
ENSATEG00000012917pabpc1b5977.670ENSECAG00000002620-9877.670Equus_caballus
ENSATEG00000012917pabpc1b5974.490ENSEEUG00000008203-9874.490Erinaceus_europaeus
ENSATEG00000012917pabpc1b10090.752ENSELUG00000015062-10090.752Esox_lucius
ENSATEG00000012917pabpc1b5959.052ENSELUG00000005389-9759.052Esox_lucius
ENSATEG00000012917pabpc1b9991.209ENSELUG00000003614pabpc1a10090.895Esox_lucius
ENSATEG00000012917pabpc1b5879.082ENSFCAG00000039701-9879.082Felis_catus
ENSATEG00000012917pabpc1b5979.082ENSFDAG00000005484-9879.082Fukomys_damarensis
ENSATEG00000012917pabpc1b10093.711ENSFHEG00000008186pabpc1b10093.711Fundulus_heteroclitus
ENSATEG00000012917pabpc1b10089.515ENSFHEG00000018979pabpc1a10089.515Fundulus_heteroclitus
ENSATEG00000012917pabpc1b9989.026ENSGMOG00000013448pabpc1a9989.026Gadus_morhua
ENSATEG00000012917pabpc1b10084.472ENSGMOG00000002448-10084.472Gadus_morhua
ENSATEG00000012917pabpc1b10094.654ENSGAFG00000010193pabpc1b10094.654Gambusia_affinis
ENSATEG00000012917pabpc1b10089.358ENSGAFG00000019750pabpc1a10089.515Gambusia_affinis
ENSATEG00000012917pabpc1b10092.702ENSGACG00000003771pabpc1b10093.012Gasterosteus_aculeatus
ENSATEG00000012917pabpc1b10089.984ENSGACG00000003572pabpc1a10089.671Gasterosteus_aculeatus
ENSATEG00000012917pabpc1b5879.082ENSGGOG00000038606-9879.082Gorilla_gorilla
ENSATEG00000012917pabpc1b5879.082ENSGGOG00000043933-9879.082Gorilla_gorilla
ENSATEG00000012917pabpc1b10095.597ENSHBUG00000002075pabpc1b10095.597Haplochromis_burtoni
ENSATEG00000012917pabpc1b9990.596ENSHBUG00000020487pabpc1a10090.596Haplochromis_burtoni
ENSATEG00000012917pabpc1b5879.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSATEG00000012917pabpc1b5879.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSATEG00000012917pabpc1b5879.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSATEG00000012917pabpc1b10089.358ENSHCOG00000013502pabpc1a10089.358Hippocampus_comes
ENSATEG00000012917pabpc1b9869.968ENSHCOG00000003175pabpc1b9982.609Hippocampus_comes
ENSATEG00000012917pabpc1b10087.107ENSIPUG00000010791-10087.107Ictalurus_punctatus
ENSATEG00000012917pabpc1b7355.224ENSIPUG00000018724-7655.224Ictalurus_punctatus
ENSATEG00000012917pabpc1b10087.579ENSIPUG00000008848pabpc1a10087.579Ictalurus_punctatus
ENSATEG00000012917pabpc1b7455.042ENSIPUG00000021244-6555.042Ictalurus_punctatus
ENSATEG00000012917pabpc1b5979.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSATEG00000012917pabpc1b5979.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSATEG00000012917pabpc1b5878.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSATEG00000012917pabpc1b10093.396ENSKMAG00000008049pabpc1b10093.553Kryptolebias_marmoratus
ENSATEG00000012917pabpc1b10089.671ENSKMAG00000000605pabpc1a10089.045Kryptolebias_marmoratus
ENSATEG00000012917pabpc1b10089.984ENSLBEG00000024002-10089.671Labrus_bergylta
ENSATEG00000012917pabpc1b10094.969ENSLBEG00000026845pabpc1b10094.969Labrus_bergylta
ENSATEG00000012917pabpc1b5978.462ENSLAFG00000023096-9878.462Loxodonta_africana
ENSATEG00000012917pabpc1b5878.680ENSMFAG00000028878-9878.680Macaca_fascicularis
ENSATEG00000012917pabpc1b5879.082ENSMMUG00000039929-9879.082Macaca_mulatta
ENSATEG00000012917pabpc1b5879.082ENSMMUG00000009740-9879.082Macaca_mulatta
ENSATEG00000012917pabpc1b5879.082ENSMMUG00000037681-9879.082Macaca_mulatta
ENSATEG00000012917pabpc1b5879.082ENSMNEG00000037732-9879.082Macaca_nemestrina
ENSATEG00000012917pabpc1b5879.082ENSMLEG00000027495-9879.082Mandrillus_leucophaeus
ENSATEG00000012917pabpc1b10096.226ENSMAMG00000014610pabpc1b10096.226Mastacembelus_armatus
ENSATEG00000012917pabpc1b10089.515ENSMAMG00000004502-10089.679Mastacembelus_armatus
ENSATEG00000012917pabpc1b10095.597ENSMZEG00005026745pabpc1b10095.597Maylandia_zebra
ENSATEG00000012917pabpc1b9990.596ENSMZEG00005025416pabpc1a10090.596Maylandia_zebra
ENSATEG00000012917pabpc1b5879.082ENSMICG00000047642-9879.082Microcebus_murinus
ENSATEG00000012917pabpc1b9989.220ENSMMOG00000018044pabpc1a10089.220Mola_mola
ENSATEG00000012917pabpc1b10088.679ENSMMOG00000018009pabpc1b10088.365Mola_mola
ENSATEG00000012917pabpc1b9966.035ENSMODG00000015024-9966.035Monodelphis_domestica
ENSATEG00000012917pabpc1b9873.089ENSMODG00000013156-9873.609Monodelphis_domestica
ENSATEG00000012917pabpc1b10088.365ENSMALG00000006066pabpc1b10090.094Monopterus_albus
ENSATEG00000012917pabpc1b10089.358ENSMALG00000013020-10089.358Monopterus_albus
ENSATEG00000012917pabpc1b5881.421ENSNGAG00000012688-9878.571Nannospalax_galili
ENSATEG00000012917pabpc1b10095.283ENSNBRG00000013737pabpc1b10095.283Neolamprologus_brichardi
ENSATEG00000012917pabpc1b10089.671ENSNBRG00000003068-10090.596Neolamprologus_brichardi
ENSATEG00000012917pabpc1b5879.082ENSNLEG00000018128-9879.082Nomascus_leucogenys
ENSATEG00000012917pabpc1b5878.571ENSODEG00000018540-9878.571Octodon_degus
ENSATEG00000012917pabpc1b10095.597ENSONIG00000002717pabpc1b10095.597Oreochromis_niloticus
ENSATEG00000012917pabpc1b10089.358ENSONIG00000006871-10089.358Oreochromis_niloticus
ENSATEG00000012917pabpc1b5979.082ENSOCUG00000002565-9879.082Oryctolagus_cuniculus
ENSATEG00000012917pabpc1b9993.333ENSORLG00000002691pabpc1a10093.333Oryzias_latipes
ENSATEG00000012917pabpc1b10086.635ENSORLG00000003008-10086.635Oryzias_latipes
ENSATEG00000012917pabpc1b10086.478ENSORLG00020022259-10086.478Oryzias_latipes_hni
ENSATEG00000012917pabpc1b10088.732ENSORLG00020022398pabpc1a10088.732Oryzias_latipes_hni
ENSATEG00000012917pabpc1b10087.107ENSORLG00015010932-10087.107Oryzias_latipes_hsok
ENSATEG00000012917pabpc1b10088.576ENSORLG00015013633pabpc110088.576Oryzias_latipes_hsok
ENSATEG00000012917pabpc1b9084.211ENSOMEG00000013627pabpc1b10084.211Oryzias_melastigma
ENSATEG00000012917pabpc1b10089.202ENSOMEG00000020219pabpc1a10089.202Oryzias_melastigma
ENSATEG00000012917pabpc1b5979.082ENSOGAG00000029513-9879.082Otolemur_garnettii
ENSATEG00000012917pabpc1b5979.082ENSOGAG00000026047-9879.082Otolemur_garnettii
ENSATEG00000012917pabpc1b5979.082ENSOARG00000005943-9879.082Ovis_aries
ENSATEG00000012917pabpc1b5879.082ENSPPAG00000012920-9879.082Pan_paniscus
ENSATEG00000012917pabpc1b5979.082ENSPPRG00000011804-9879.082Panthera_pardus
ENSATEG00000012917pabpc1b5979.082ENSPPRG00000011809-9879.082Panthera_pardus
ENSATEG00000012917pabpc1b5879.082ENSPTRG00000028252-9879.082Pan_troglodytes
ENSATEG00000012917pabpc1b5879.082ENSPANG00000011549-9879.082Papio_anubis
ENSATEG00000012917pabpc1b10094.497ENSPKIG00000005676pabpc1b10094.340Paramormyrops_kingsleyae
ENSATEG00000012917pabpc1b7094.843ENSPMGG00000023134-9794.843Periophthalmus_magnuspinnatus
ENSATEG00000012917pabpc1b7092.360ENSPMGG00000022487pabpc1a9292.360Periophthalmus_magnuspinnatus
ENSATEG00000012917pabpc1b9970.429ENSPCIG00000016995-5570.429Phascolarctos_cinereus
ENSATEG00000012917pabpc1b10094.340ENSPFOG00000005917pabpc1b10094.340Poecilia_formosa
ENSATEG00000012917pabpc1b10088.018ENSPFOG00000010815pabpc1a10088.018Poecilia_formosa
ENSATEG00000012917pabpc1b10094.654ENSPLAG00000001388pabpc1b10094.654Poecilia_latipinna
ENSATEG00000012917pabpc1b10089.515ENSPLAG00000004114pabpc1a10089.515Poecilia_latipinna
ENSATEG00000012917pabpc1b10094.340ENSPMEG00000014399pabpc1b10094.340Poecilia_mexicana
ENSATEG00000012917pabpc1b10089.515ENSPMEG00000001334pabpc1a10089.515Poecilia_mexicana
ENSATEG00000012917pabpc1b9990.138ENSPREG00000019595pabpc1a10090.138Poecilia_reticulata
ENSATEG00000012917pabpc1b10094.654ENSPREG00000010911pabpc1b10094.654Poecilia_reticulata
ENSATEG00000012917pabpc1b5979.082ENSPPYG00000020468-9879.082Pongo_abelii
ENSATEG00000012917pabpc1b5979.082ENSPCAG00000005308-9879.082Procavia_capensis
ENSATEG00000012917pabpc1b5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSATEG00000012917pabpc1b5979.487ENSPVAG00000016117-9879.487Pteropus_vampyrus
ENSATEG00000012917pabpc1b10095.597ENSPNYG00000012578pabpc1b10095.597Pundamilia_nyererei
ENSATEG00000012917pabpc1b10089.515ENSPNYG00000005192pabpc1a10089.515Pundamilia_nyererei
ENSATEG00000012917pabpc1b10089.953ENSPNAG00000028408pabpc1a10089.639Pygocentrus_nattereri
ENSATEG00000012917pabpc1b10093.396ENSPNAG00000024626pabpc1b10093.396Pygocentrus_nattereri
ENSATEG00000012917pabpc1b5879.082ENSRBIG00000027173-9879.082Rhinopithecus_bieti
ENSATEG00000012917pabpc1b9985.022ENSRBIG00000028738-8486.784Rhinopithecus_bieti
ENSATEG00000012917pabpc1b5879.082ENSRROG00000017404-9879.082Rhinopithecus_roxellana
ENSATEG00000012917pabpc1b9862.862ENSSHAG00000000511-10062.862Sarcophilus_harrisii
ENSATEG00000012917pabpc1b10094.488ENSSFOG00015002752-10094.488Scleropages_formosus
ENSATEG00000012917pabpc1b6880.347ENSSFOG00015019668-9180.347Scleropages_formosus
ENSATEG00000012917pabpc1b10089.937ENSSFOG00015006662pabpc1a10089.937Scleropages_formosus
ENSATEG00000012917pabpc1b10089.515ENSSMAG00000010803pabpc1a10089.202Scophthalmus_maximus
ENSATEG00000012917pabpc1b10095.912ENSSMAG00000006869pabpc1b10095.912Scophthalmus_maximus
ENSATEG00000012917pabpc1b10089.828ENSSDUG00000006675pabpc1a10089.828Seriola_dumerili
ENSATEG00000012917pabpc1b10095.283ENSSDUG00000011965pabpc1b10095.283Seriola_dumerili
ENSATEG00000012917pabpc1b10089.828ENSSLDG00000011661pabpc1a10089.828Seriola_lalandi_dorsalis
ENSATEG00000012917pabpc1b10097.036ENSSLDG00000014156pabpc1b10097.036Seriola_lalandi_dorsalis
ENSATEG00000012917pabpc1b10089.671ENSSPAG00000014453-10089.671Stegastes_partitus
ENSATEG00000012917pabpc1b10097.327ENSSPAG00000019265pabpc1b10097.327Stegastes_partitus
ENSATEG00000012917pabpc1b5879.082ENSSSCG00000032167-9879.082Sus_scrofa
ENSATEG00000012917pabpc1b5879.082ENSSSCG00000036336-9879.082Sus_scrofa
ENSATEG00000012917pabpc1b10091.209ENSTRUG00000003767-10091.209Takifugu_rubripes
ENSATEG00000012917pabpc1b10089.045ENSTRUG00000011577-10089.045Takifugu_rubripes
ENSATEG00000012917pabpc1b10086.265ENSTNIG00000013307pabpc1a10086.265Tetraodon_nigroviridis
ENSATEG00000012917pabpc1b10091.406ENSTNIG00000009153pabpc1b10091.250Tetraodon_nigroviridis
ENSATEG00000012917pabpc1b5979.082ENSTTRG00000013181-9879.082Tursiops_truncatus
ENSATEG00000012917pabpc1b5879.082ENSUAMG00000008089-9879.082Ursus_americanus
ENSATEG00000012917pabpc1b9753.257ENSUMAG00000023926-8967.403Ursus_maritimus
ENSATEG00000012917pabpc1b5879.082ENSUMAG00000003364-9879.082Ursus_maritimus
ENSATEG00000012917pabpc1b5878.000ENSVVUG00000015892-9778.000Vulpes_vulpes
ENSATEG00000012917pabpc1b9944.843ENSXETG00000015439-10044.843Xenopus_tropicalis
ENSATEG00000012917pabpc1b10090.566ENSXCOG00000019901pabpc1b10090.125Xiphophorus_couchianus
ENSATEG00000012917pabpc1b10085.669ENSXCOG00000017066pabpc1a10085.669Xiphophorus_couchianus
ENSATEG00000012917pabpc1b10089.515ENSXMAG00000002555pabpc1a10089.515Xiphophorus_maculatus
ENSATEG00000012917pabpc1b10094.811ENSXMAG00000003753pabpc1b10094.811Xiphophorus_maculatus

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