EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000013343 (Gene tree)
Gene ID: 113152610
Gene Symbol: ncl
Alias: fa12d03|wu:fa12d03|zgc:152810
Full Name: nucleolin
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 7805 bases
Position: chrOOHO01000016.1:16004118-16011922
Accession: 113152610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000019165	RRM_1	PF00076.22	4.2e-62	1	4
ENSATEP00000019165	RRM_1	PF00076.22	4.2e-62	2	4
ENSATEP00000019165	RRM_1	PF00076.22	4.2e-62	3	4
ENSATEP00000019165	RRM_1	PF00076.22	4.2e-62	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000019482	-	3726	-	ENSATEP00000019165	698 (aa)	XP_026201747	UPI000E45FCB1

Gene Model

Click here to download ENSATEG00000013343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000013343's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000013343	ncl	70	41.910	ENSATEG00000019862	-	80	45.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000013343	ncl	60	42.263	ENSAPOG00000014534	-	67	42.821	Acanthochromis_polyacanthus
ENSATEG00000013343	ncl	60	89.286	ENSAPOG00000023888	ncl	65	89.177	Acanthochromis_polyacanthus
ENSATEG00000013343	ncl	54	80.533	ENSACIG00000013234	ncl	62	80.533	Amphilophus_citrinellus
ENSATEG00000013343	ncl	60	88.863	ENSAOCG00000003133	ncl	66	88.172	Amphiprion_ocellaris
ENSATEG00000013343	ncl	70	37.647	ENSAOCG00000014792	-	61	42.268	Amphiprion_ocellaris
ENSATEG00000013343	ncl	70	37.843	ENSAPEG00000013612	-	60	42.526	Amphiprion_percula
ENSATEG00000013343	ncl	60	88.836	ENSAPEG00000002769	ncl	65	88.147	Amphiprion_percula
ENSATEG00000013343	ncl	55	58.163	ENSAPLG00000012897	-	64	59.326	Anas_platyrhynchos
ENSATEG00000013343	ncl	53	64.062	ENSACAG00000001006	-	52	63.969	Anolis_carolinensis
ENSATEG00000013343	ncl	51	75.287	ENSACLG00000026031	ncl	94	75.287	Astatotilapia_calliptera
ENSATEG00000013343	ncl	58	68.293	ENSAMXG00000001647	ncl	81	71.572	Astyanax_mexicanus
ENSATEG00000013343	ncl	65	56.879	ENSCPBG00000016444	-	56	62.105	Chrysemys_picta_bellii
ENSATEG00000013343	ncl	57	87.679	ENSCSEG00000015089	ncl	70	82.062	Cynoglossus_semilaevis
ENSATEG00000013343	ncl	53	82.258	ENSCVAG00000012600	ncl	67	78.788	Cyprinodon_variegatus
ENSATEG00000013343	ncl	60	74.941	ENSDARG00000002710	ncl	80	77.670	Danio_rerio
ENSATEG00000013343	ncl	52	48.901	ENSDNOG00000040257	-	60	48.352	Dasypus_novemcinctus
ENSATEG00000013343	ncl	56	43.909	ENSDNOG00000031611	-	65	44.595	Dasypus_novemcinctus
ENSATEG00000013343	ncl	71	73.800	ENSELUG00000006033	ncl	71	75.375	Esox_lucius
ENSATEG00000013343	ncl	61	49.176	ENSELUG00000022826	-	80	51.475	Esox_lucius
ENSATEG00000013343	ncl	53	59.055	ENSFALG00000007592	-	54	59.055	Ficedula_albicollis
ENSATEG00000013343	ncl	60	79.762	ENSFHEG00000018000	ncl	84	68.802	Fundulus_heteroclitus
ENSATEG00000013343	ncl	54	71.129	ENSGMOG00000001341	ncl	72	68.026	Gadus_morhua
ENSATEG00000013343	ncl	73	75.586	ENSGAFG00000015375	ncl	62	80.519	Gambusia_affinis
ENSATEG00000013343	ncl	89	74.603	ENSGACG00000008970	ncl	72	77.489	Gasterosteus_aculeatus
ENSATEG00000013343	ncl	90	48.545	ENSGAGG00000013330	-	56	62.269	Gopherus_agassizii
ENSATEG00000013343	ncl	69	81.489	ENSHCOG00000010234	ncl	66	81.277	Hippocampus_comes
ENSATEG00000013343	ncl	53	73.203	ENSIPUG00000024556	ncl	81	74.837	Ictalurus_punctatus
ENSATEG00000013343	ncl	60	85.000	ENSKMAG00000008111	ncl	65	82.035	Kryptolebias_marmoratus
ENSATEG00000013343	ncl	53	43.299	ENSLBEG00000014278	-	82	43.716	Labrus_bergylta
ENSATEG00000013343	ncl	64	42.299	ENSLBEG00000007915	-	66	45.269	Labrus_bergylta
ENSATEG00000013343	ncl	60	88.095	ENSLBEG00000019073	ncl	67	83.550	Labrus_bergylta
ENSATEG00000013343	ncl	57	52.854	ENSLACG00000022167	-	79	54.545	Latimeria_chalumnae
ENSATEG00000013343	ncl	60	63.700	ENSLACG00000009328	ncl	56	65.517	Latimeria_chalumnae
ENSATEG00000013343	ncl	51	70.670	ENSLOCG00000004828	ncl	63	66.311	Lepisosteus_oculatus
ENSATEG00000013343	ncl	89	83.968	ENSMAMG00000002086	ncl	56	88.769	Mastacembelus_armatus
ENSATEG00000013343	ncl	61	40.406	ENSMAMG00000003479	-	69	41.818	Mastacembelus_armatus
ENSATEG00000013343	ncl	60	79.762	ENSMZEG00005017438	ncl	66	79.355	Maylandia_zebra
ENSATEG00000013343	ncl	52	60.054	ENSMGAG00000008147	-	88	60.054	Meleagris_gallopavo
ENSATEG00000013343	ncl	65	52.878	ENSMODG00000002470	-	54	57.922	Monodelphis_domestica
ENSATEG00000013343	ncl	93	78.803	ENSMALG00000014827	ncl	70	86.986	Monopterus_albus
ENSATEG00000013343	ncl	50	44.984	ENSMPUG00000001663	-	57	44.984	Mustela_putorius_furo
ENSATEG00000013343	ncl	50	80.142	ENSNBRG00000001232	ncl	82	80.142	Neolamprologus_brichardi
ENSATEG00000013343	ncl	50	80.142	ENSNBRG00000000146	-	86	80.142	Neolamprologus_brichardi
ENSATEG00000013343	ncl	53	58.730	ENSMEUG00000012335	-	54	58.839	Notamacropus_eugenii
ENSATEG00000013343	ncl	65	77.851	ENSONIG00000012508	ncl	65	79.266	Oreochromis_niloticus
ENSATEG00000013343	ncl	51	54.430	ENSONIG00000010631	-	97	40.000	Oreochromis_niloticus
ENSATEG00000013343	ncl	55	60.250	ENSOANG00000008732	-	60	61.979	Ornithorhynchus_anatinus
ENSATEG00000013343	ncl	56	38.250	ENSORLG00000004645	-	83	39.426	Oryzias_latipes
ENSATEG00000013343	ncl	60	83.810	ENSORLG00020017943	ncl	63	70.884	Oryzias_latipes_hni
ENSATEG00000013343	ncl	55	38.791	ENSORLG00020003497	-	74	39.426	Oryzias_latipes_hni
ENSATEG00000013343	ncl	57	39.259	ENSORLG00015006613	-	77	39.426	Oryzias_latipes_hsok
ENSATEG00000013343	ncl	60	80.714	ENSORLG00015013815	ncl	87	84.967	Oryzias_latipes_hsok
ENSATEG00000013343	ncl	54	86.400	ENSOMEG00000020786	ncl	63	83.656	Oryzias_melastigma
ENSATEG00000013343	ncl	56	38.861	ENSOMEG00000015864	-	82	39.221	Oryzias_melastigma
ENSATEG00000013343	ncl	60	78.251	ENSPKIG00000002604	ncl	65	76.509	Paramormyrops_kingsleyae
ENSATEG00000013343	ncl	53	62.338	ENSPSIG00000002361	-	54	61.979	Pelodiscus_sinensis
ENSATEG00000013343	ncl	53	57.963	ENSPCIG00000003293	-	53	57.922	Phascolarctos_cinereus
ENSATEG00000013343	ncl	66	81.818	ENSPFOG00000024205	ncl	68	72.655	Poecilia_formosa
ENSATEG00000013343	ncl	77	79.588	ENSPLAG00000024026	ncl	72	78.464	Poecilia_latipinna
ENSATEG00000013343	ncl	66	81.169	ENSPMEG00000006000	ncl	62	80.087	Poecilia_mexicana
ENSATEG00000013343	ncl	65	78.022	ENSPNYG00000020494	ncl	66	79.698	Pundamilia_nyererei
ENSATEG00000013343	ncl	53	52.910	ENSSHAG00000002702	-	59	53.281	Sarcophilus_harrisii
ENSATEG00000013343	ncl	56	44.818	ENSSFOG00015013153	-	78	47.078	Scleropages_formosus
ENSATEG00000013343	ncl	60	86.525	ENSSMAG00000021241	ncl	66	84.516	Scophthalmus_maximus
ENSATEG00000013343	ncl	55	45.088	ENSSMAG00000007582	-	61	45.669	Scophthalmus_maximus
ENSATEG00000013343	ncl	69	41.566	ENSSDUG00000010922	-	88	43.632	Seriola_dumerili
ENSATEG00000013343	ncl	66	91.540	ENSSDUG00000006128	ncl	86	93.067	Seriola_dumerili
ENSATEG00000013343	ncl	69	90.664	ENSSLDG00000002012	ncl	66	91.342	Seriola_lalandi_dorsalis
ENSATEG00000013343	ncl	61	44.262	ENSSLDG00000015784	-	69	43.627	Seriola_lalandi_dorsalis
ENSATEG00000013343	ncl	53	61.323	ENSSPUG00000008244	-	60	61.224	Sphenodon_punctatus
ENSATEG00000013343	ncl	50	89.007	ENSSPAG00000002637	ncl	82	89.007	Stegastes_partitus
ENSATEG00000013343	ncl	58	44.526	ENSSPAG00000001859	-	61	44.531	Stegastes_partitus
ENSATEG00000013343	ncl	53	59.686	ENSTGUG00000009782	-	60	59.948	Taeniopygia_guttata
ENSATEG00000013343	ncl	82	72.949	ENSTRUG00000008185	ncl	70	77.731	Takifugu_rubripes
ENSATEG00000013343	ncl	53	83.155	ENSTNIG00000012186	ncl	75	76.407	Tetraodon_nigroviridis
ENSATEG00000013343	ncl	52	64.305	ENSXETG00000009517	ncl	71	65.123	Xenopus_tropicalis
ENSATEG00000013343	ncl	54	42.308	ENSXCOG00000007369	-	89	42.105	Xiphophorus_couchianus
ENSATEG00000013343	ncl	57	50.633	ENSXCOG00000003524	ncl	89	65.600	Xiphophorus_couchianus
ENSATEG00000013343	ncl	66	79.310	ENSXMAG00000005914	ncl	63	80.388	Xiphophorus_maculatus