EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000013523 (Gene tree)
Gene ID: 113169963
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 35271 bases
Position: chrOOHO01000006.1:18428905-18464175
Accession: 113169963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000019507	La	PF05383.17	3.6e-21	1	1
ENSATEP00000019480	La	PF05383.17	3.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000019834	-	3198	-	ENSATEP00000019507	1065 (aa)	-	-
ENSATET00000019807	-	7040	XM_026371766	ENSATEP00000019480	1110 (aa)	XP_026227551	UPI000E4594B0

Gene Model

Click here to download ENSATEG00000013523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000013523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000013523	larp1	89	51.786	ENSATEG00000017849	larp1b	88	52.113

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000013523	larp1	82	68.456	ENSG00000155506	LARP1	90	81.212	Homo_sapiens
ENSATEG00000013523	larp1	87	95.928	ENSAPOG00000020685	larp1	99	97.209	Acanthochromis_polyacanthus
ENSATEG00000013523	larp1	82	68.811	ENSAMEG00000016673	LARP1	97	66.804	Ailuropoda_melanoleuca
ENSATEG00000013523	larp1	100	80.130	ENSACIG00000012994	larp1	99	79.131	Amphilophus_citrinellus
ENSATEG00000013523	larp1	77	92.523	ENSAOCG00000007792	larp1	97	93.489	Amphiprion_ocellaris
ENSATEG00000013523	larp1	100	89.767	ENSAPEG00000022246	larp1	98	90.205	Amphiprion_percula
ENSATEG00000013523	larp1	79	74.568	ENSAPLG00000007559	LARP1	97	72.171	Anas_platyrhynchos
ENSATEG00000013523	larp1	84	70.501	ENSACAG00000004071	LARP1	94	72.216	Anolis_carolinensis
ENSATEG00000013523	larp1	82	68.306	ENSANAG00000029949	LARP1	97	65.499	Aotus_nancymaae
ENSATEG00000013523	larp1	100	90.349	ENSACLG00000015256	larp1	98	92.141	Astatotilapia_calliptera
ENSATEG00000013523	larp1	99	75.000	ENSAMXG00000000859	larp1	98	75.048	Astyanax_mexicanus
ENSATEG00000013523	larp1	96	61.913	ENSBTAG00000008443	LARP1	97	62.812	Bos_taurus
ENSATEG00000013523	larp1	96	62.546	ENSCJAG00000004454	LARP1	97	62.535	Callithrix_jacchus
ENSATEG00000013523	larp1	84	66.804	ENSCAFG00000017639	LARP1	97	66.804	Canis_familiaris
ENSATEG00000013523	larp1	78	70.323	ENSCAFG00020023860	LARP1	96	70.336	Canis_lupus_dingo
ENSATEG00000013523	larp1	96	64.195	ENSCHIG00000014414	LARP1	97	62.605	Capra_hircus
ENSATEG00000013523	larp1	91	63.923	ENSTSYG00000013732	LARP1	96	66.010	Carlito_syrichta
ENSATEG00000013523	larp1	76	68.252	ENSCAPG00000013865	LARP1	86	68.133	Cavia_aperea
ENSATEG00000013523	larp1	84	66.873	ENSCPOG00000003377	LARP1	97	66.770	Cavia_porcellus
ENSATEG00000013523	larp1	96	62.339	ENSCCAG00000025201	LARP1	97	62.535	Cebus_capucinus
ENSATEG00000013523	larp1	96	61.802	ENSCATG00000030675	LARP1	97	62.570	Cercocebus_atys
ENSATEG00000013523	larp1	87	65.927	ENSCLAG00000012755	LARP1	97	66.667	Chinchilla_lanigera
ENSATEG00000013523	larp1	77	69.718	ENSCSAG00000010800	LARP1	95	69.836	Chlorocebus_sabaeus
ENSATEG00000013523	larp1	81	67.718	ENSCHOG00000012716	LARP1	89	67.927	Choloepus_hoffmanni
ENSATEG00000013523	larp1	87	72.794	ENSCPBG00000002173	LARP1	91	70.681	Chrysemys_picta_bellii
ENSATEG00000013523	larp1	84	66.771	ENSCANG00000037418	LARP1	90	66.667	Colobus_angolensis_palliatus
ENSATEG00000013523	larp1	98	63.578	ENSCGRG00001016913	Larp1	97	63.910	Cricetulus_griseus_chok1gshd
ENSATEG00000013523	larp1	84	64.786	ENSCGRG00000009916	Larp1	97	66.704	Cricetulus_griseus_crigri
ENSATEG00000013523	larp1	100	86.828	ENSCSEG00000016431	larp1	99	86.194	Cynoglossus_semilaevis
ENSATEG00000013523	larp1	100	85.714	ENSCVAG00000022687	larp1	100	85.076	Cyprinodon_variegatus
ENSATEG00000013523	larp1	90	71.429	ENSDARG00000101722	larp1	94	73.913	Danio_rerio
ENSATEG00000013523	larp1	98	61.210	ENSDNOG00000012073	LARP1	97	61.883	Dasypus_novemcinctus
ENSATEG00000013523	larp1	86	65.253	ENSDORG00000002897	Larp1	95	66.183	Dipodomys_ordii
ENSATEG00000013523	larp1	79	69.476	ENSETEG00000020251	LARP1	100	67.281	Echinops_telfairi
ENSATEG00000013523	larp1	96	62.386	ENSEASG00005001070	LARP1	97	62.661	Equus_asinus_asinus
ENSATEG00000013523	larp1	96	62.500	ENSECAG00000017002	LARP1	78	63.143	Equus_caballus
ENSATEG00000013523	larp1	81	67.146	ENSEEUG00000001065	LARP1	96	65.708	Erinaceus_europaeus
ENSATEG00000013523	larp1	99	77.936	ENSELUG00000019403	larp1	98	77.656	Esox_lucius
ENSATEG00000013523	larp1	96	61.741	ENSFCAG00000000592	LARP1	97	62.799	Felis_catus
ENSATEG00000013523	larp1	77	75.483	ENSFALG00000008335	LARP1	96	75.592	Ficedula_albicollis
ENSATEG00000013523	larp1	84	66.978	ENSFDAG00000021125	LARP1	94	68.966	Fukomys_damarensis
ENSATEG00000013523	larp1	63	75.221	ENSFHEG00000020307	larp1	92	79.880	Fundulus_heteroclitus
ENSATEG00000013523	larp1	99	67.754	ENSGALG00000040109	LARP1	95	71.338	Gallus_gallus
ENSATEG00000013523	larp1	96	69.260	ENSGAGG00000025113	LARP1	95	73.441	Gopherus_agassizii
ENSATEG00000013523	larp1	82	68.456	ENSGGOG00000006048	LARP1	88	68.521	Gorilla_gorilla
ENSATEG00000013523	larp1	100	90.250	ENSHBUG00000020762	larp1	98	91.925	Haplochromis_burtoni
ENSATEG00000013523	larp1	98	62.886	ENSHGLG00000006267	LARP1	97	62.908	Heterocephalus_glaber_female
ENSATEG00000013523	larp1	84	67.656	ENSHGLG00100014230	-	97	66.356	Heterocephalus_glaber_male
ENSATEG00000013523	larp1	87	57.099	ENSHGLG00100003395	-	88	57.099	Heterocephalus_glaber_male
ENSATEG00000013523	larp1	91	93.012	ENSHCOG00000010786	larp1	98	95.178	Hippocampus_comes
ENSATEG00000013523	larp1	88	76.080	ENSIPUG00000019105	Larp1	93	76.882	Ictalurus_punctatus
ENSATEG00000013523	larp1	84	66.528	ENSSTOG00000005678	LARP1	95	66.528	Ictidomys_tridecemlineatus
ENSATEG00000013523	larp1	96	58.845	ENSJJAG00000016950	Larp1	97	58.765	Jaculus_jaculus
ENSATEG00000013523	larp1	100	86.368	ENSKMAG00000018468	larp1	96	89.681	Kryptolebias_marmoratus
ENSATEG00000013523	larp1	98	86.957	ENSLBEG00000027172	larp1	99	85.222	Labrus_bergylta
ENSATEG00000013523	larp1	93	76.219	ENSLOCG00000012457	larp1	99	74.676	Lepisosteus_oculatus
ENSATEG00000013523	larp1	98	61.490	ENSLAFG00000008991	LARP1	97	62.197	Loxodonta_africana
ENSATEG00000013523	larp1	84	66.563	ENSMFAG00000031651	LARP1	90	66.562	Macaca_fascicularis
ENSATEG00000013523	larp1	84	65.900	ENSMMUG00000009411	LARP1	96	66.004	Macaca_mulatta
ENSATEG00000013523	larp1	79	69.248	ENSMNEG00000039294	LARP1	95	70.258	Macaca_nemestrina
ENSATEG00000013523	larp1	84	66.667	ENSMLEG00000035142	LARP1	90	66.667	Mandrillus_leucophaeus
ENSATEG00000013523	larp1	100	89.668	ENSMAMG00000021788	larp1	100	87.691	Mastacembelus_armatus
ENSATEG00000013523	larp1	100	90.349	ENSMZEG00005009345	larp1	98	92.141	Maylandia_zebra
ENSATEG00000013523	larp1	87	70.061	ENSMGAG00000005696	LARP1	96	71.593	Meleagris_gallopavo
ENSATEG00000013523	larp1	98	63.177	ENSMAUG00000001385	Larp1	97	63.628	Mesocricetus_auratus
ENSATEG00000013523	larp1	85	67.146	ENSMICG00000000837	LARP1	95	70.794	Microcebus_murinus
ENSATEG00000013523	larp1	98	63.394	ENSMOCG00000008920	Larp1	97	63.910	Microtus_ochrogaster
ENSATEG00000013523	larp1	94	67.816	ENSMMOG00000013364	larp1	99	67.816	Mola_mola
ENSATEG00000013523	larp1	84	71.659	ENSMODG00000008663	LARP1	96	67.668	Monodelphis_domestica
ENSATEG00000013523	larp1	100	88.769	ENSMALG00000017180	larp1	99	87.306	Monopterus_albus
ENSATEG00000013523	larp1	98	63.520	MGP_CAROLIEiJ_G0016383	Larp1	97	63.730	Mus_caroli
ENSATEG00000013523	larp1	98	63.611	ENSMUSG00000037331	Larp1	97	63.824	Mus_musculus
ENSATEG00000013523	larp1	98	63.553	MGP_PahariEiJ_G0017518	Larp1	97	63.577	Mus_pahari
ENSATEG00000013523	larp1	98	63.795	MGP_SPRETEiJ_G0017225	Larp1	97	63.824	Mus_spretus
ENSATEG00000013523	larp1	82	58.610	ENSMPUG00000013564	LARP1	99	59.477	Mustela_putorius_furo
ENSATEG00000013523	larp1	84	64.899	ENSMLUG00000002608	LARP1	98	63.655	Myotis_lucifugus
ENSATEG00000013523	larp1	87	65.121	ENSNGAG00000001098	Larp1	95	66.077	Nannospalax_galili
ENSATEG00000013523	larp1	90	87.603	ENSNBRG00000008963	larp1	98	86.068	Neolamprologus_brichardi
ENSATEG00000013523	larp1	82	69.316	ENSNLEG00000016588	LARP1	96	65.928	Nomascus_leucogenys
ENSATEG00000013523	larp1	81	68.114	ENSMEUG00000002957	LARP1	91	68.808	Notamacropus_eugenii
ENSATEG00000013523	larp1	82	68.478	ENSOPRG00000013014	LARP1	97	66.356	Ochotona_princeps
ENSATEG00000013523	larp1	84	66.564	ENSODEG00000010824	LARP1	97	66.460	Octodon_degus
ENSATEG00000013523	larp1	99	84.791	ENSONIG00000017308	larp1	99	84.114	Oreochromis_niloticus
ENSATEG00000013523	larp1	87	69.107	ENSOANG00000005096	LARP1	95	69.335	Ornithorhynchus_anatinus
ENSATEG00000013523	larp1	98	62.579	ENSOCUG00000013066	LARP1	97	62.918	Oryctolagus_cuniculus
ENSATEG00000013523	larp1	100	84.277	ENSORLG00000000824	larp1	97	84.314	Oryzias_latipes
ENSATEG00000013523	larp1	100	84.007	ENSORLG00020022241	larp1	97	84.034	Oryzias_latipes_hni
ENSATEG00000013523	larp1	100	84.442	ENSORLG00015007538	larp1	97	85.607	Oryzias_latipes_hsok
ENSATEG00000013523	larp1	100	83.813	ENSOMEG00000003134	larp1	97	85.421	Oryzias_melastigma
ENSATEG00000013523	larp1	85	67.548	ENSOGAG00000016750	LARP1	97	66.874	Otolemur_garnettii
ENSATEG00000013523	larp1	84	67.014	ENSOARG00000009893	LARP1	97	66.839	Ovis_aries
ENSATEG00000013523	larp1	82	68.456	ENSPPAG00000042993	LARP1	88	68.521	Pan_paniscus
ENSATEG00000013523	larp1	82	69.147	ENSPPRG00000009780	LARP1	91	66.254	Panthera_pardus
ENSATEG00000013523	larp1	82	69.332	ENSPTIG00000007013	LARP1	91	67.252	Panthera_tigris_altaica
ENSATEG00000013523	larp1	96	61.935	ENSPTRG00000017447	LARP1	97	62.245	Pan_troglodytes
ENSATEG00000013523	larp1	96	61.844	ENSPANG00000008080	LARP1	97	62.570	Papio_anubis
ENSATEG00000013523	larp1	97	66.258	ENSPKIG00000017153	-	99	67.292	Paramormyrops_kingsleyae
ENSATEG00000013523	larp1	99	76.301	ENSPKIG00000010096	larp1	97	76.369	Paramormyrops_kingsleyae
ENSATEG00000013523	larp1	93	78.303	ENSPMGG00000011599	larp1	97	78.779	Periophthalmus_magnuspinnatus
ENSATEG00000013523	larp1	87	64.919	ENSPEMG00000022523	Larp1	96	65.973	Peromyscus_maniculatus_bairdii
ENSATEG00000013523	larp1	95	67.012	ENSPCIG00000019242	LARP1	89	65.348	Phascolarctos_cinereus
ENSATEG00000013523	larp1	100	82.901	ENSPFOG00000005836	larp1	97	83.038	Poecilia_formosa
ENSATEG00000013523	larp1	100	81.720	ENSPLAG00000008936	larp1	97	84.422	Poecilia_latipinna
ENSATEG00000013523	larp1	100	82.722	ENSPMEG00000013656	larp1	97	82.852	Poecilia_mexicana
ENSATEG00000013523	larp1	89	85.253	ENSPREG00000005726	larp1	95	86.049	Poecilia_reticulata
ENSATEG00000013523	larp1	82	66.740	ENSPCAG00000006407	LARP1	97	64.041	Procavia_capensis
ENSATEG00000013523	larp1	84	59.485	ENSPCOG00000016949	LARP1	97	62.151	Propithecus_coquereli
ENSATEG00000013523	larp1	96	62.295	ENSPVAG00000002262	LARP1	97	62.377	Pteropus_vampyrus
ENSATEG00000013523	larp1	100	90.170	ENSPNYG00000007938	larp1	98	92.141	Pundamilia_nyererei
ENSATEG00000013523	larp1	98	73.913	ENSPNAG00000021427	larp1	92	79.162	Pygocentrus_nattereri
ENSATEG00000013523	larp1	84	67.312	ENSRNOG00000031544	Larp1	96	65.839	Rattus_norvegicus
ENSATEG00000013523	larp1	84	66.667	ENSRBIG00000038005	LARP1	90	66.667	Rhinopithecus_bieti
ENSATEG00000013523	larp1	82	68.415	ENSRROG00000034073	LARP1	96	70.000	Rhinopithecus_roxellana
ENSATEG00000013523	larp1	87	64.911	ENSSBOG00000019816	LARP1	97	65.803	Saimiri_boliviensis_boliviensis
ENSATEG00000013523	larp1	84	72.747	ENSSHAG00000011115	LARP1	94	71.798	Sarcophilus_harrisii
ENSATEG00000013523	larp1	97	73.876	ENSSFOG00015018058	-	97	73.043	Scleropages_formosus
ENSATEG00000013523	larp1	88	75.930	ENSSFOG00015020304	larp1	94	76.782	Scleropages_formosus
ENSATEG00000013523	larp1	93	86.441	ENSSMAG00000007468	larp1	98	85.657	Scophthalmus_maximus
ENSATEG00000013523	larp1	100	92.287	ENSSDUG00000000268	larp1	98	91.249	Seriola_dumerili
ENSATEG00000013523	larp1	82	87.995	ENSSLDG00000016505	larp1	98	86.127	Seriola_lalandi_dorsalis
ENSATEG00000013523	larp1	53	83.936	ENSSARG00000013907	-	83	84.000	Sorex_araneus
ENSATEG00000013523	larp1	99	65.825	ENSSPUG00000012179	-	97	64.728	Sphenodon_punctatus
ENSATEG00000013523	larp1	100	90.828	ENSSPAG00000003910	larp1	99	89.412	Stegastes_partitus
ENSATEG00000013523	larp1	96	61.623	ENSSSCG00000017069	LARP1	97	69.310	Sus_scrofa
ENSATEG00000013523	larp1	81	73.400	ENSTGUG00000000704	LARP1	100	69.319	Taeniopygia_guttata
ENSATEG00000013523	larp1	99	85.804	ENSTRUG00000009470	larp1	98	84.686	Takifugu_rubripes
ENSATEG00000013523	larp1	79	67.808	ENSTBEG00000003381	LARP1	97	67.749	Tupaia_belangeri
ENSATEG00000013523	larp1	84	67.442	ENSTTRG00000015934	LARP1	97	66.701	Tursiops_truncatus
ENSATEG00000013523	larp1	96	61.965	ENSUAMG00000019334	LARP1	97	62.857	Ursus_americanus
ENSATEG00000013523	larp1	84	66.771	ENSUMAG00000002934	LARP1	96	68.537	Ursus_maritimus
ENSATEG00000013523	larp1	78	70.323	ENSVVUG00000004644	LARP1	96	70.336	Vulpes_vulpes
ENSATEG00000013523	larp1	92	67.347	ENSXETG00000008413	larp1	92	69.864	Xenopus_tropicalis
ENSATEG00000013523	larp1	87	83.554	ENSXCOG00000004022	larp1	94	87.320	Xiphophorus_couchianus
ENSATEG00000013523	larp1	100	82.543	ENSXMAG00000018780	larp1	97	82.759	Xiphophorus_maculatus