EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000013720 (Gene tree)
Gene ID: 113156273
Gene Symbol: a1cf
Alias: acf
Full Name: apobec1 complementation factor
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 6755 bases
Position: chrOOHO01000022.1:17967550-17974304
Accession: ZDB-GENE-060824-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000019698	DND1_DSRM	PF14709.7	4.1e-26	1	1
ENSATEP00000019698	RRM_1	PF00076.22	4.2e-40	1	3
ENSATEP00000019698	RRM_1	PF00076.22	4.2e-40	2	3
ENSATEP00000019698	RRM_1	PF00076.22	4.2e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000020035	-	1809	-	ENSATEP00000019698	602 (aa)	-	-

Gene Model

Click here to download ENSATEG00000013720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000013720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000013720	a1cf	50	52.104	ENSATEG00000013885	syncripl	53	53.242
ENSATEG00000013720	a1cf	86	65.398	ENSATEG00000010775	rbm46	77	65.398
ENSATEG00000013720	a1cf	91	51.906	ENSATEG00000018400	rbm47	76	52.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000013720	a1cf	100	78.218	ENSG00000148584	A1CF	100	88.614	Homo_sapiens
ENSATEG00000013720	a1cf	100	87.043	ENSAPOG00000008259	a1cf	100	87.375	Acanthochromis_polyacanthus
ENSATEG00000013720	a1cf	100	76.144	ENSAMEG00000000523	A1CF	100	75.407	Ailuropoda_melanoleuca
ENSATEG00000013720	a1cf	100	88.962	ENSACIG00000008632	a1cf	100	89.951	Amphilophus_citrinellus
ENSATEG00000013720	a1cf	100	88.538	ENSAOCG00000023744	a1cf	100	89.701	Amphiprion_ocellaris
ENSATEG00000013720	a1cf	100	87.377	ENSAPEG00000009537	a1cf	100	88.525	Amphiprion_percula
ENSATEG00000013720	a1cf	100	77.362	ENSAPLG00000002964	A1CF	100	75.896	Anas_platyrhynchos
ENSATEG00000013720	a1cf	100	77.355	ENSACAG00000015269	A1CF	100	77.025	Anolis_carolinensis
ENSATEG00000013720	a1cf	100	78.713	ENSANAG00000019974	A1CF	100	77.393	Aotus_nancymaae
ENSATEG00000013720	a1cf	100	88.060	ENSACLG00000017428	a1cf	100	88.557	Astatotilapia_calliptera
ENSATEG00000013720	a1cf	100	76.214	ENSAMXG00000018180	a1cf	100	75.728	Astyanax_mexicanus
ENSATEG00000013720	a1cf	100	77.723	ENSBTAG00000021195	A1CF	100	78.597	Bos_taurus
ENSATEG00000013720	a1cf	100	77.524	ENSCJAG00000005045	A1CF	100	76.221	Callithrix_jacchus
ENSATEG00000013720	a1cf	100	76.721	ENSCAFG00000015581	A1CF	100	75.407	Canis_familiaris
ENSATEG00000013720	a1cf	100	76.721	ENSCAFG00020026421	A1CF	98	82.667	Canis_lupus_dingo
ENSATEG00000013720	a1cf	100	77.199	ENSCHIG00000020411	A1CF	100	76.384	Capra_hircus
ENSATEG00000013720	a1cf	94	77.972	ENSTSYG00000001755	A1CF	100	76.748	Carlito_syrichta
ENSATEG00000013720	a1cf	100	73.469	ENSCAPG00000017386	A1CF	100	75.399	Cavia_aperea
ENSATEG00000013720	a1cf	100	76.059	ENSCPOG00000009807	A1CF	100	74.756	Cavia_porcellus
ENSATEG00000013720	a1cf	100	77.362	ENSCCAG00000018168	A1CF	100	76.059	Cebus_capucinus
ENSATEG00000013720	a1cf	100	78.053	ENSCATG00000043715	A1CF	100	76.733	Cercocebus_atys
ENSATEG00000013720	a1cf	100	75.733	ENSCLAG00000010424	A1CF	100	74.593	Chinchilla_lanigera
ENSATEG00000013720	a1cf	100	77.036	ENSCSAG00000007032	A1CF	100	75.733	Chlorocebus_sabaeus
ENSATEG00000013720	a1cf	98	75.249	ENSCHOG00000009089	A1CF	99	73.920	Choloepus_hoffmanni
ENSATEG00000013720	a1cf	100	77.850	ENSCPBG00000026464	A1CF	100	76.384	Chrysemys_picta_bellii
ENSATEG00000013720	a1cf	100	77.036	ENSCANG00000038032	A1CF	100	75.733	Colobus_angolensis_palliatus
ENSATEG00000013720	a1cf	100	76.547	ENSCGRG00001017413	A1cf	100	75.407	Cricetulus_griseus_chok1gshd
ENSATEG00000013720	a1cf	100	75.856	ENSCGRG00000017332	A1cf	100	75.081	Cricetulus_griseus_crigri
ENSATEG00000013720	a1cf	100	85.691	ENSCSEG00000002361	a1cf	100	85.622	Cynoglossus_semilaevis
ENSATEG00000013720	a1cf	100	92.525	ENSCVAG00000010520	a1cf	100	92.525	Cyprinodon_variegatus
ENSATEG00000013720	a1cf	100	82.392	ENSDARG00000002968	a1cf	100	82.060	Danio_rerio
ENSATEG00000013720	a1cf	100	77.036	ENSDNOG00000002829	A1CF	100	75.733	Dasypus_novemcinctus
ENSATEG00000013720	a1cf	82	84.783	ENSETEG00000012527	A1CF	81	84.783	Echinops_telfairi
ENSATEG00000013720	a1cf	100	77.398	ENSEASG00005012924	A1CF	100	76.260	Equus_asinus_asinus
ENSATEG00000013720	a1cf	100	77.073	ENSECAG00000010424	A1CF	100	75.935	Equus_caballus
ENSATEG00000013720	a1cf	79	68.697	ENSEEUG00000000013	A1CF	97	68.192	Erinaceus_europaeus
ENSATEG00000013720	a1cf	100	82.248	ENSELUG00000003159	a1cf	100	81.759	Esox_lucius
ENSATEG00000013720	a1cf	100	76.578	ENSFCAG00000011179	A1CF	100	75.743	Felis_catus
ENSATEG00000013720	a1cf	100	78.713	ENSFALG00000013183	A1CF	100	77.393	Ficedula_albicollis
ENSATEG00000013720	a1cf	100	77.228	ENSFDAG00000019371	A1CF	100	75.908	Fukomys_damarensis
ENSATEG00000013720	a1cf	100	85.479	ENSFHEG00000019652	a1cf	96	91.406	Fundulus_heteroclitus
ENSATEG00000013720	a1cf	100	80.000	ENSGMOG00000018943	a1cf	100	78.843	Gadus_morhua
ENSATEG00000013720	a1cf	95	76.764	ENSGALG00000003765	A1CF	96	75.387	Gallus_gallus
ENSATEG00000013720	a1cf	100	83.333	ENSGAFG00000014868	a1cf	100	83.168	Gambusia_affinis
ENSATEG00000013720	a1cf	100	86.808	ENSGACG00000010241	a1cf	100	86.645	Gasterosteus_aculeatus
ENSATEG00000013720	a1cf	96	76.740	ENSGAGG00000016508	A1CF	98	75.212	Gopherus_agassizii
ENSATEG00000013720	a1cf	100	77.199	ENSGGOG00000009670	A1CF	100	75.733	Gorilla_gorilla
ENSATEG00000013720	a1cf	100	90.280	ENSHBUG00000021959	a1cf	100	91.269	Haplochromis_burtoni
ENSATEG00000013720	a1cf	100	76.547	ENSHGLG00000008955	A1CF	100	75.081	Heterocephalus_glaber_female
ENSATEG00000013720	a1cf	100	75.896	ENSHGLG00100000518	A1CF	100	74.430	Heterocephalus_glaber_male
ENSATEG00000013720	a1cf	100	74.598	ENSHCOG00000017669	a1cf	100	76.367	Hippocampus_comes
ENSATEG00000013720	a1cf	90	84.364	ENSIPUG00000010367	a1cf	100	82.456	Ictalurus_punctatus
ENSATEG00000013720	a1cf	100	88.169	ENSKMAG00000006568	a1cf	100	87.358	Kryptolebias_marmoratus
ENSATEG00000013720	a1cf	99	89.689	ENSLBEG00000020994	a1cf	99	89.689	Labrus_bergylta
ENSATEG00000013720	a1cf	100	79.734	ENSLACG00000008061	A1CF	100	78.383	Latimeria_chalumnae
ENSATEG00000013720	a1cf	100	81.596	ENSLOCG00000006302	a1cf	100	80.293	Lepisosteus_oculatus
ENSATEG00000013720	a1cf	100	76.221	ENSLAFG00000015462	A1CF	100	76.873	Loxodonta_africana
ENSATEG00000013720	a1cf	100	78.053	ENSMFAG00000035948	A1CF	100	76.733	Macaca_fascicularis
ENSATEG00000013720	a1cf	100	78.053	ENSMMUG00000007077	A1CF	100	76.733	Macaca_mulatta
ENSATEG00000013720	a1cf	100	77.888	ENSMNEG00000031454	A1CF	100	76.568	Macaca_nemestrina
ENSATEG00000013720	a1cf	100	77.036	ENSMLEG00000037223	A1CF	100	75.733	Mandrillus_leucophaeus
ENSATEG00000013720	a1cf	100	89.786	ENSMAMG00000010402	a1cf	100	89.292	Mastacembelus_armatus
ENSATEG00000013720	a1cf	100	87.213	ENSMZEG00005013245	a1cf	100	87.213	Maylandia_zebra
ENSATEG00000013720	a1cf	100	76.423	ENSMGAG00000001507	A1CF	100	75.122	Meleagris_gallopavo
ENSATEG00000013720	a1cf	100	76.059	ENSMAUG00000007422	A1cf	100	75.081	Mesocricetus_auratus
ENSATEG00000013720	a1cf	100	77.303	ENSMICG00000003377	A1CF	100	77.796	Microcebus_murinus
ENSATEG00000013720	a1cf	100	76.384	ENSMOCG00000021536	A1cf	100	75.081	Microtus_ochrogaster
ENSATEG00000013720	a1cf	100	79.104	ENSMMOG00000009422	a1cf	100	79.104	Mola_mola
ENSATEG00000013720	a1cf	92	78.417	ENSMODG00000016478	A1CF	97	78.957	Monodelphis_domestica
ENSATEG00000013720	a1cf	100	83.389	ENSMALG00000012992	a1cf	100	83.223	Monopterus_albus
ENSATEG00000013720	a1cf	100	77.063	MGP_CAROLIEiJ_G0022873	A1cf	100	75.743	Mus_caroli
ENSATEG00000013720	a1cf	100	77.063	ENSMUSG00000052595	A1cf	99	82.667	Mus_musculus
ENSATEG00000013720	a1cf	100	76.568	MGP_PahariEiJ_G0014366	A1cf	100	74.917	Mus_pahari
ENSATEG00000013720	a1cf	100	76.656	MGP_SPRETEiJ_G0023792	A1cf	100	75.331	Mus_spretus
ENSATEG00000013720	a1cf	100	71.173	ENSMPUG00000016971	A1CF	100	70.684	Mustela_putorius_furo
ENSATEG00000013720	a1cf	100	76.998	ENSMLUG00000016071	A1CF	100	75.896	Myotis_lucifugus
ENSATEG00000013720	a1cf	100	76.710	ENSNGAG00000015136	A1cf	100	75.407	Nannospalax_galili
ENSATEG00000013720	a1cf	100	90.280	ENSNBRG00000001712	a1cf	100	91.269	Neolamprologus_brichardi
ENSATEG00000013720	a1cf	100	77.362	ENSNLEG00000012028	A1CF	100	76.059	Nomascus_leucogenys
ENSATEG00000013720	a1cf	94	77.622	ENSMEUG00000015909	A1CF	100	76.224	Notamacropus_eugenii
ENSATEG00000013720	a1cf	89	69.686	ENSOPRG00000010667	A1CF	100	66.963	Ochotona_princeps
ENSATEG00000013720	a1cf	100	91.269	ENSONIG00000019105	a1cf	100	91.433	Oreochromis_niloticus
ENSATEG00000013720	a1cf	79	78.737	ENSOANG00000007360	A1CF	99	78.316	Ornithorhynchus_anatinus
ENSATEG00000013720	a1cf	100	77.393	ENSOCUG00000011587	A1CF	100	76.073	Oryctolagus_cuniculus
ENSATEG00000013720	a1cf	100	84.918	ENSORLG00000013342	a1cf	100	84.098	Oryzias_latipes
ENSATEG00000013720	a1cf	100	86.179	ENSORLG00020000586	a1cf	100	86.341	Oryzias_latipes_hni
ENSATEG00000013720	a1cf	100	86.179	ENSORLG00015018569	a1cf	100	86.341	Oryzias_latipes_hsok
ENSATEG00000013720	a1cf	100	88.284	ENSOMEG00000013531	a1cf	100	87.624	Oryzias_melastigma
ENSATEG00000013720	a1cf	100	75.896	ENSOGAG00000012884	A1CF	100	76.384	Otolemur_garnettii
ENSATEG00000013720	a1cf	100	76.873	ENSOARG00000013695	A1CF	100	76.059	Ovis_aries
ENSATEG00000013720	a1cf	99	74.388	ENSPPAG00000028115	A1CF	99	79.020	Pan_paniscus
ENSATEG00000013720	a1cf	100	75.902	ENSPPRG00000012180	A1CF	100	75.081	Panthera_pardus
ENSATEG00000013720	a1cf	100	75.902	ENSPTIG00000021223	A1CF	100	75.081	Panthera_tigris_altaica
ENSATEG00000013720	a1cf	100	78.218	ENSPTRG00000002508	A1CF	100	76.733	Pan_troglodytes
ENSATEG00000013720	a1cf	100	78.053	ENSPANG00000021988	A1CF	100	76.733	Papio_anubis
ENSATEG00000013720	a1cf	100	81.475	ENSPKIG00000025176	a1cf	100	81.148	Paramormyrops_kingsleyae
ENSATEG00000013720	a1cf	100	78.053	ENSPSIG00000010318	A1CF	100	76.733	Pelodiscus_sinensis
ENSATEG00000013720	a1cf	98	72.007	ENSPMGG00000013359	a1cf	99	72.850	Periophthalmus_magnuspinnatus
ENSATEG00000013720	a1cf	100	76.710	ENSPEMG00000015021	A1cf	100	75.407	Peromyscus_maniculatus_bairdii
ENSATEG00000013720	a1cf	100	76.898	ENSPCIG00000002175	A1CF	100	77.228	Phascolarctos_cinereus
ENSATEG00000013720	a1cf	100	90.391	ENSPFOG00000007437	-	100	90.391	Poecilia_formosa
ENSATEG00000013720	a1cf	100	90.554	ENSPFOG00000006683	a1cf	100	90.554	Poecilia_formosa
ENSATEG00000013720	a1cf	100	91.419	ENSPLAG00000001210	-	100	91.419	Poecilia_latipinna
ENSATEG00000013720	a1cf	100	91.419	ENSPLAG00000000026	a1cf	100	91.419	Poecilia_latipinna
ENSATEG00000013720	a1cf	100	81.759	ENSPMEG00000015529	-	100	81.759	Poecilia_mexicana
ENSATEG00000013720	a1cf	100	82.838	ENSPMEG00000000921	a1cf	100	82.838	Poecilia_mexicana
ENSATEG00000013720	a1cf	100	90.065	ENSPREG00000016298	a1cf	100	90.065	Poecilia_reticulata
ENSATEG00000013720	a1cf	100	78.383	ENSPPYG00000002819	A1CF	100	77.063	Pongo_abelii
ENSATEG00000013720	a1cf	80	61.123	ENSPCAG00000006463	A1CF	79	60.707	Procavia_capensis
ENSATEG00000013720	a1cf	100	76.221	ENSPCOG00000024172	A1CF	100	76.547	Propithecus_coquereli
ENSATEG00000013720	a1cf	100	89.431	ENSPNYG00000017944	a1cf	100	90.407	Pundamilia_nyererei
ENSATEG00000013720	a1cf	100	84.375	ENSPNAG00000007704	a1cf	100	84.211	Pygocentrus_nattereri
ENSATEG00000013720	a1cf	100	77.393	ENSRNOG00000033195	A1cf	100	76.073	Rattus_norvegicus
ENSATEG00000013720	a1cf	100	71.753	ENSRBIG00000042892	A1CF	100	74.664	Rhinopithecus_bieti
ENSATEG00000013720	a1cf	100	77.036	ENSRROG00000041398	A1CF	99	76.748	Rhinopithecus_roxellana
ENSATEG00000013720	a1cf	100	77.614	ENSSBOG00000021930	A1CF	100	76.493	Saimiri_boliviensis_boliviensis
ENSATEG00000013720	a1cf	100	77.393	ENSSHAG00000005096	A1CF	100	76.073	Sarcophilus_harrisii
ENSATEG00000013720	a1cf	100	84.236	ENSSFOG00015011774	a1cf	100	84.072	Scleropages_formosus
ENSATEG00000013720	a1cf	100	90.097	ENSSMAG00000013271	a1cf	100	89.610	Scophthalmus_maximus
ENSATEG00000013720	a1cf	100	91.148	ENSSDUG00000013930	a1cf	100	90.656	Seriola_dumerili
ENSATEG00000013720	a1cf	100	84.718	ENSSLDG00000004290	a1cf	100	84.385	Seriola_lalandi_dorsalis
ENSATEG00000013720	a1cf	95	70.435	ENSSARG00000005940	A1CF	95	70.087	Sorex_araneus
ENSATEG00000013720	a1cf	95	76.712	ENSSPUG00000006797	A1CF	95	75.000	Sphenodon_punctatus
ENSATEG00000013720	a1cf	100	77.850	ENSSSCG00000010431	A1CF	100	76.710	Sus_scrofa
ENSATEG00000013720	a1cf	100	77.724	ENSTGUG00000005090	A1CF	100	76.098	Taeniopygia_guttata
ENSATEG00000013720	a1cf	100	87.154	ENSTRUG00000001982	a1cf	100	87.805	Takifugu_rubripes
ENSATEG00000013720	a1cf	100	86.201	ENSTNIG00000003580	a1cf	100	86.201	Tetraodon_nigroviridis
ENSATEG00000013720	a1cf	95	73.913	ENSTTRG00000013190	A1CF	94	72.696	Tursiops_truncatus
ENSATEG00000013720	a1cf	100	77.558	ENSUAMG00000020065	A1CF	100	76.238	Ursus_americanus
ENSATEG00000013720	a1cf	100	76.059	ENSUMAG00000011162	A1CF	100	74.756	Ursus_maritimus
ENSATEG00000013720	a1cf	87	75.895	ENSVPAG00000006130	A1CF	86	74.388	Vicugna_pacos
ENSATEG00000013720	a1cf	100	77.907	ENSVVUG00000002504	A1CF	100	76.568	Vulpes_vulpes
ENSATEG00000013720	a1cf	100	70.820	ENSXETG00000006611	a1cf	100	70.492	Xenopus_tropicalis
ENSATEG00000013720	a1cf	100	91.254	ENSXCOG00000003302	a1cf	100	91.089	Xiphophorus_couchianus
ENSATEG00000013720	a1cf	100	90.065	ENSXMAG00000016703	a1cf	100	89.902	Xiphophorus_maculatus