EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000013789 (Gene tree)
Gene ID: 113170536
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 50376 bases
Position: chrOOHO01000021.1:18741458-18791833
Accession: 113170536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000019766	GTP_EFTU	PF00009.27	2e-62	1	1
ENSATEP00000019788	GTP_EFTU	PF00009.27	2e-62	1	1
ENSATEP00000019766	GTP_EFTU_D2	PF03144.25	1.4e-15	1	1
ENSATEP00000019788	GTP_EFTU_D2	PF03144.25	1.4e-15	1	1
ENSATEP00000019766	EFG_IV	PF03764.18	2.2e-36	1	1
ENSATEP00000019788	EFG_IV	PF03764.18	2.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000020131	-	4998	-	ENSATEP00000019788	748 (aa)	XP_026228447	UPI000E465B13
ENSATET00000020109	-	4990	-	ENSATEP00000019766	748 (aa)	XP_026228447	UPI000E465B13

Gene Model

Click here to download ENSATEG00000013789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000013789's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000013789	gfm1	97	33.635	ENSATEG00000010821	gfm2	95	33.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000013789	gfm1	98	79.184	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSATEG00000013789	gfm1	92	88.372	ENSAPOG00000016489	gfm1	98	88.372	Acanthochromis_polyacanthus
ENSATEG00000013789	gfm1	96	80.641	ENSAMEG00000013542	GFM1	100	78.220	Ailuropoda_melanoleuca
ENSATEG00000013789	gfm1	97	85.793	ENSACIG00000014465	gfm1	94	85.793	Amphilophus_citrinellus
ENSATEG00000013789	gfm1	100	89.171	ENSAOCG00000006023	gfm1	100	89.171	Amphiprion_ocellaris
ENSATEG00000013789	gfm1	100	88.904	ENSAPEG00000024499	gfm1	100	88.904	Amphiprion_percula
ENSATEG00000013789	gfm1	97	80.690	ENSAPLG00000005022	GFM1	100	80.690	Anas_platyrhynchos
ENSATEG00000013789	gfm1	97	81.241	ENSACAG00000006829	GFM1	98	81.241	Anolis_carolinensis
ENSATEG00000013789	gfm1	100	78.029	ENSANAG00000035983	GFM1	100	78.029	Aotus_nancymaae
ENSATEG00000013789	gfm1	100	90.508	ENSACLG00000016586	gfm1	100	90.508	Astatotilapia_calliptera
ENSATEG00000013789	gfm1	100	85.027	ENSAMXG00000013435	gfm1	98	85.910	Astyanax_mexicanus
ENSATEG00000013789	gfm1	96	80.362	ENSBTAG00000027795	GFM1	95	80.362	Bos_taurus
ENSATEG00000013789	gfm1	94	57.061	WBGene00009246	gfm-1	95	56.742	Caenorhabditis_elegans
ENSATEG00000013789	gfm1	100	78.429	ENSCJAG00000000363	GFM1	100	78.429	Callithrix_jacchus
ENSATEG00000013789	gfm1	98	79.700	ENSCAFG00000009006	GFM1	100	80.621	Canis_familiaris
ENSATEG00000013789	gfm1	98	79.592	ENSCAFG00020005878	GFM1	98	81.058	Canis_lupus_dingo
ENSATEG00000013789	gfm1	96	80.641	ENSCHIG00000015220	GFM1	95	80.641	Capra_hircus
ENSATEG00000013789	gfm1	100	77.689	ENSTSYG00000002013	GFM1	100	77.689	Carlito_syrichta
ENSATEG00000013789	gfm1	96	70.166	ENSCAPG00000005699	GFM1	97	70.166	Cavia_aperea
ENSATEG00000013789	gfm1	100	77.984	ENSCPOG00000001194	GFM1	100	77.984	Cavia_porcellus
ENSATEG00000013789	gfm1	100	78.029	ENSCCAG00000025561	GFM1	100	78.029	Cebus_capucinus
ENSATEG00000013789	gfm1	100	78.695	ENSCATG00000037622	GFM1	100	78.695	Cercocebus_atys
ENSATEG00000013789	gfm1	96	80.250	ENSCLAG00000002503	GFM1	95	80.250	Chinchilla_lanigera
ENSATEG00000013789	gfm1	100	78.695	ENSCSAG00000012162	GFM1	100	78.695	Chlorocebus_sabaeus
ENSATEG00000013789	gfm1	100	69.129	ENSCHOG00000004867	GFM1	100	69.129	Choloepus_hoffmanni
ENSATEG00000013789	gfm1	100	78.743	ENSCPBG00000018367	GFM1	99	78.743	Chrysemys_picta_bellii
ENSATEG00000013789	gfm1	94	58.462	ENSCING00000011960	-	93	58.462	Ciona_intestinalis
ENSATEG00000013789	gfm1	95	59.583	ENSCSAVG00000008514	-	99	59.583	Ciona_savignyi
ENSATEG00000013789	gfm1	98	79.456	ENSCANG00000031714	GFM1	100	78.562	Colobus_angolensis_palliatus
ENSATEG00000013789	gfm1	100	78.429	ENSCGRG00001022095	GFM1	100	78.429	Cricetulus_griseus_chok1gshd
ENSATEG00000013789	gfm1	100	78.429	ENSCGRG00000012043	GFM1	100	78.429	Cricetulus_griseus_crigri
ENSATEG00000013789	gfm1	98	82.538	ENSCSEG00000017088	gfm1	99	82.538	Cynoglossus_semilaevis
ENSATEG00000013789	gfm1	100	91.711	ENSCVAG00000004126	gfm1	100	91.711	Cyprinodon_variegatus
ENSATEG00000013789	gfm1	100	83.021	ENSDARG00000063624	gfm1	100	83.021	Danio_rerio
ENSATEG00000013789	gfm1	55	78.729	ENSDNOG00000016385	-	100	78.729	Dasypus_novemcinctus
ENSATEG00000013789	gfm1	100	76.852	ENSDORG00000014165	Gfm1	100	76.852	Dipodomys_ordii
ENSATEG00000013789	gfm1	95	68.688	FBgn0263133	mEFG1	95	68.688	Drosophila_melanogaster
ENSATEG00000013789	gfm1	96	72.677	ENSETEG00000019197	GFM1	95	72.677	Echinops_telfairi
ENSATEG00000013789	gfm1	90	62.611	ENSEBUG00000012794	gfm1	99	62.611	Eptatretus_burgeri
ENSATEG00000013789	gfm1	96	60.000	ENSEEUG00000000429	GFM1	99	60.000	Erinaceus_europaeus
ENSATEG00000013789	gfm1	100	85.695	ENSELUG00000014728	gfm1	100	85.695	Esox_lucius
ENSATEG00000013789	gfm1	97	80.028	ENSFCAG00000013291	GFM1	100	78.249	Felis_catus
ENSATEG00000013789	gfm1	90	80.000	ENSFALG00000007619	GFM1	100	80.000	Ficedula_albicollis
ENSATEG00000013789	gfm1	100	77.851	ENSFDAG00000016559	GFM1	100	77.851	Fukomys_damarensis
ENSATEG00000013789	gfm1	100	91.444	ENSFHEG00000006091	gfm1	100	91.444	Fundulus_heteroclitus
ENSATEG00000013789	gfm1	97	86.245	ENSGMOG00000010161	gfm1	100	86.245	Gadus_morhua
ENSATEG00000013789	gfm1	97	80.414	ENSGALG00000009634	GFM1	98	80.414	Gallus_gallus
ENSATEG00000013789	gfm1	100	90.508	ENSGAFG00000012527	gfm1	100	90.508	Gambusia_affinis
ENSATEG00000013789	gfm1	99	89.973	ENSGACG00000009864	gfm1	99	89.973	Gasterosteus_aculeatus
ENSATEG00000013789	gfm1	98	79.456	ENSGGOG00000003085	GFM1	100	78.562	Gorilla_gorilla
ENSATEG00000013789	gfm1	100	90.642	ENSHBUG00000002120	gfm1	100	90.642	Haplochromis_burtoni
ENSATEG00000013789	gfm1	96	79.694	ENSHGLG00000016855	GFM1	100	77.188	Heterocephalus_glaber_female
ENSATEG00000013789	gfm1	96	79.694	ENSHGLG00100013049	GFM1	100	77.188	Heterocephalus_glaber_male
ENSATEG00000013789	gfm1	100	88.636	ENSHCOG00000007638	gfm1	100	88.636	Hippocampus_comes
ENSATEG00000013789	gfm1	100	85.027	ENSIPUG00000005873	gfm1	100	85.027	Ictalurus_punctatus
ENSATEG00000013789	gfm1	96	79.167	ENSSTOG00000010150	GFM1	97	79.167	Ictidomys_tridecemlineatus
ENSATEG00000013789	gfm1	100	77.630	ENSJJAG00000016447	Gfm1	100	77.630	Jaculus_jaculus
ENSATEG00000013789	gfm1	100	86.898	ENSKMAG00000020768	gfm1	100	86.898	Kryptolebias_marmoratus
ENSATEG00000013789	gfm1	94	89.872	ENSLBEG00000021315	gfm1	100	89.872	Labrus_bergylta
ENSATEG00000013789	gfm1	100	80.214	ENSLACG00000012295	GFM1	100	80.214	Latimeria_chalumnae
ENSATEG00000013789	gfm1	97	80.301	ENSLOCG00000003778	gfm1	100	80.301	Lepisosteus_oculatus
ENSATEG00000013789	gfm1	96	79.028	ENSLAFG00000010945	GFM1	99	77.778	Loxodonta_africana
ENSATEG00000013789	gfm1	100	78.562	ENSMFAG00000035731	GFM1	100	78.562	Macaca_fascicularis
ENSATEG00000013789	gfm1	100	78.562	ENSMMUG00000004961	GFM1	100	78.562	Macaca_mulatta
ENSATEG00000013789	gfm1	100	78.429	ENSMNEG00000033245	GFM1	100	78.429	Macaca_nemestrina
ENSATEG00000013789	gfm1	96	78.779	ENSMLEG00000030908	GFM1	99	78.378	Mandrillus_leucophaeus
ENSATEG00000013789	gfm1	100	91.444	ENSMAMG00000011760	gfm1	100	91.444	Mastacembelus_armatus
ENSATEG00000013789	gfm1	100	90.642	ENSMZEG00005016639	gfm1	100	90.642	Maylandia_zebra
ENSATEG00000013789	gfm1	97	80.663	ENSMGAG00000010641	GFM1	97	80.663	Meleagris_gallopavo
ENSATEG00000013789	gfm1	96	80.946	ENSMAUG00000000611	Gfm1	96	80.946	Mesocricetus_auratus
ENSATEG00000013789	gfm1	97	80.165	ENSMICG00000049086	GFM1	100	78.249	Microcebus_murinus
ENSATEG00000013789	gfm1	100	78.961	ENSMOCG00000000465	Gfm1	100	78.961	Microtus_ochrogaster
ENSATEG00000013789	gfm1	97	91.322	ENSMMOG00000012538	gfm1	98	91.322	Mola_mola
ENSATEG00000013789	gfm1	99	78.833	ENSMODG00000015673	GFM1	99	78.833	Monodelphis_domestica
ENSATEG00000013789	gfm1	96	89.540	ENSMALG00000012508	gfm1	95	89.540	Monopterus_albus
ENSATEG00000013789	gfm1	100	78.562	MGP_CAROLIEiJ_G0025052	Gfm1	100	78.652	Mus_caroli
ENSATEG00000013789	gfm1	100	78.296	ENSMUSG00000027774	Gfm1	100	78.296	Mus_musculus
ENSATEG00000013789	gfm1	100	77.896	MGP_PahariEiJ_G0026495	Gfm1	100	78.277	Mus_pahari
ENSATEG00000013789	gfm1	100	78.296	MGP_SPRETEiJ_G0025994	Gfm1	100	78.296	Mus_spretus
ENSATEG00000013789	gfm1	100	78.117	ENSMPUG00000002859	GFM1	100	78.117	Mustela_putorius_furo
ENSATEG00000013789	gfm1	97	80.028	ENSMLUG00000000452	GFM1	96	80.028	Myotis_lucifugus
ENSATEG00000013789	gfm1	100	78.400	ENSNGAG00000012375	Gfm1	100	78.400	Nannospalax_galili
ENSATEG00000013789	gfm1	97	90.659	ENSNBRG00000004631	gfm1	99	90.659	Neolamprologus_brichardi
ENSATEG00000013789	gfm1	97	80.165	ENSNLEG00000004176	GFM1	100	78.562	Nomascus_leucogenys
ENSATEG00000013789	gfm1	91	71.618	ENSMEUG00000007784	GFM1	99	71.618	Notamacropus_eugenii
ENSATEG00000013789	gfm1	100	77.704	ENSOPRG00000009860	GFM1	100	77.704	Ochotona_princeps
ENSATEG00000013789	gfm1	98	79.700	ENSODEG00000004316	GFM1	100	78.515	Octodon_degus
ENSATEG00000013789	gfm1	100	90.909	ENSONIG00000003772	gfm1	100	90.909	Oreochromis_niloticus
ENSATEG00000013789	gfm1	98	80.245	ENSOCUG00000013561	GFM1	100	78.780	Oryctolagus_cuniculus
ENSATEG00000013789	gfm1	95	89.266	ENSORLG00000006487	gfm1	100	89.266	Oryzias_latipes
ENSATEG00000013789	gfm1	100	87.968	ENSORLG00020003362	gfm1	100	87.968	Oryzias_latipes_hni
ENSATEG00000013789	gfm1	100	88.102	ENSORLG00015005829	gfm1	100	88.102	Oryzias_latipes_hsok
ENSATEG00000013789	gfm1	100	88.636	ENSOMEG00000012894	gfm1	100	88.636	Oryzias_melastigma
ENSATEG00000013789	gfm1	97	79.201	ENSOGAG00000008298	GFM1	96	79.201	Otolemur_garnettii
ENSATEG00000013789	gfm1	96	79.750	ENSOARG00000002409	GFM1	99	79.750	Ovis_aries
ENSATEG00000013789	gfm1	98	79.456	ENSPPAG00000033881	GFM1	100	78.562	Pan_paniscus
ENSATEG00000013789	gfm1	97	80.028	ENSPPRG00000009281	GFM1	100	78.249	Panthera_pardus
ENSATEG00000013789	gfm1	97	79.890	ENSPTIG00000012416	GFM1	100	78.117	Panthera_tigris_altaica
ENSATEG00000013789	gfm1	98	79.456	ENSPTRG00000015570	GFM1	100	78.562	Pan_troglodytes
ENSATEG00000013789	gfm1	100	78.562	ENSPANG00000016512	GFM1	100	78.562	Papio_anubis
ENSATEG00000013789	gfm1	100	82.620	ENSPKIG00000004876	gfm1	100	82.620	Paramormyrops_kingsleyae
ENSATEG00000013789	gfm1	100	79.017	ENSPSIG00000012567	GFM1	99	79.017	Pelodiscus_sinensis
ENSATEG00000013789	gfm1	97	87.724	ENSPMGG00000014068	gfm1	100	87.724	Periophthalmus_magnuspinnatus
ENSATEG00000013789	gfm1	100	78.429	ENSPEMG00000008942	Gfm1	100	78.429	Peromyscus_maniculatus_bairdii
ENSATEG00000013789	gfm1	86	77.294	ENSPCIG00000020195	GFM1	94	80.826	Phascolarctos_cinereus
ENSATEG00000013789	gfm1	100	90.642	ENSPFOG00000011022	gfm1	100	90.642	Poecilia_formosa
ENSATEG00000013789	gfm1	98	90.450	ENSPLAG00000019585	gfm1	100	90.028	Poecilia_latipinna
ENSATEG00000013789	gfm1	100	90.508	ENSPMEG00000012376	gfm1	100	90.508	Poecilia_mexicana
ENSATEG00000013789	gfm1	100	90.374	ENSPREG00000001332	gfm1	95	90.374	Poecilia_reticulata
ENSATEG00000013789	gfm1	98	79.184	ENSPPYG00000014244	GFM1	100	78.296	Pongo_abelii
ENSATEG00000013789	gfm1	94	78.805	ENSPCAG00000008934	GFM1	100	78.805	Procavia_capensis
ENSATEG00000013789	gfm1	98	79.019	ENSPCOG00000022259	GFM1	100	77.719	Propithecus_coquereli
ENSATEG00000013789	gfm1	97	79.339	ENSPVAG00000013605	GFM1	100	77.586	Pteropus_vampyrus
ENSATEG00000013789	gfm1	100	90.374	ENSPNYG00000006037	gfm1	100	90.374	Pundamilia_nyererei
ENSATEG00000013789	gfm1	100	86.230	ENSPNAG00000001237	gfm1	100	86.230	Pygocentrus_nattereri
ENSATEG00000013789	gfm1	100	78.562	ENSRNOG00000012873	Gfm1	100	78.562	Rattus_norvegicus
ENSATEG00000013789	gfm1	98	79.456	ENSRBIG00000031363	GFM1	100	78.562	Rhinopithecus_bieti
ENSATEG00000013789	gfm1	98	79.592	ENSRROG00000031081	GFM1	100	78.695	Rhinopithecus_roxellana
ENSATEG00000013789	gfm1	92	56.403	YLR069C	-	90	56.403	Saccharomyces_cerevisiae
ENSATEG00000013789	gfm1	100	78.296	ENSSBOG00000023252	GFM1	100	78.296	Saimiri_boliviensis_boliviensis
ENSATEG00000013789	gfm1	99	79.463	ENSSHAG00000017772	GFM1	99	79.463	Sarcophilus_harrisii
ENSATEG00000013789	gfm1	100	82.777	ENSSFOG00015003117	gfm1	100	82.777	Scleropages_formosus
ENSATEG00000013789	gfm1	100	90.241	ENSSMAG00000013221	gfm1	100	90.241	Scophthalmus_maximus
ENSATEG00000013789	gfm1	100	93.048	ENSSDUG00000018665	gfm1	100	93.048	Seriola_dumerili
ENSATEG00000013789	gfm1	100	93.048	ENSSLDG00000020606	gfm1	100	93.048	Seriola_lalandi_dorsalis
ENSATEG00000013789	gfm1	99	76.590	ENSSPUG00000018686	GFM1	100	76.590	Sphenodon_punctatus
ENSATEG00000013789	gfm1	100	91.444	ENSSPAG00000008800	gfm1	100	91.444	Stegastes_partitus
ENSATEG00000013789	gfm1	96	79.944	ENSSSCG00000025651	GFM1	100	75.066	Sus_scrofa
ENSATEG00000013789	gfm1	100	88.235	ENSTRUG00000009244	gfm1	100	88.235	Takifugu_rubripes
ENSATEG00000013789	gfm1	100	89.572	ENSTNIG00000007729	gfm1	100	89.572	Tetraodon_nigroviridis
ENSATEG00000013789	gfm1	90	71.556	ENSTBEG00000017404	GFM1	89	71.556	Tupaia_belangeri
ENSATEG00000013789	gfm1	96	80.084	ENSTTRG00000001735	GFM1	95	80.084	Tursiops_truncatus
ENSATEG00000013789	gfm1	97	79.752	ENSUAMG00000026381	GFM1	100	77.851	Ursus_americanus
ENSATEG00000013789	gfm1	97	79.752	ENSUMAG00000011268	GFM1	100	77.851	Ursus_maritimus
ENSATEG00000013789	gfm1	96	77.019	ENSVPAG00000009444	GFM1	100	74.635	Vicugna_pacos
ENSATEG00000013789	gfm1	98	79.645	ENSVVUG00000020091	GFM1	100	80.473	Vulpes_vulpes
ENSATEG00000013789	gfm1	100	80.319	ENSXETG00000032551	GFM1	100	80.319	Xenopus_tropicalis
ENSATEG00000013789	gfm1	54	86.849	ENSXCOG00000012590	gfm1	93	86.849	Xiphophorus_couchianus
ENSATEG00000013789	gfm1	100	90.508	ENSXMAG00000000261	gfm1	100	90.508	Xiphophorus_maculatus