EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000013877 (Gene tree)
Gene ID: 113148380
Gene Symbol: srp54
Alias: zgc:55842|zgc:85713
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 9984 bases
Position: chrOOHO01000007.1:211351-221334
Accession: 113148380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000019928	SRP54	PF00448.22	1.7e-77	1	1
ENSATEP00000019928	SRP54_N	PF02881.19	4.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000020273	-	2251	XM_026340071	ENSATEP00000019928	504 (aa)	XP_026195856	UPI000E4572E9

Gene Model

Click here to download ENSATEG00000013877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000013877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000013877	srp54	100	96.230	ENSG00000100883	SRP54	100	97.674	Homo_sapiens
ENSATEG00000013877	srp54	100	99.405	ENSAPOG00000011314	srp54	100	99.405	Acanthochromis_polyacanthus
ENSATEG00000013877	srp54	100	96.230	ENSAMEG00000015544	SRP54	100	96.230	Ailuropoda_melanoleuca
ENSATEG00000013877	srp54	89	98.441	ENSACIG00000022831	srp54	97	98.441	Amphilophus_citrinellus
ENSATEG00000013877	srp54	100	99.405	ENSAOCG00000019401	srp54	100	99.405	Amphiprion_ocellaris
ENSATEG00000013877	srp54	100	99.405	ENSAPEG00000001977	srp54	100	99.405	Amphiprion_percula
ENSATEG00000013877	srp54	94	95.570	ENSAPLG00000010125	SRP54	95	95.570	Anas_platyrhynchos
ENSATEG00000013877	srp54	100	95.635	ENSACAG00000002103	-	100	95.635	Anolis_carolinensis
ENSATEG00000013877	srp54	65	79.758	ENSACAG00000001124	-	100	79.758	Anolis_carolinensis
ENSATEG00000013877	srp54	86	92.627	ENSACAG00000010631	-	100	92.627	Anolis_carolinensis
ENSATEG00000013877	srp54	100	96.230	ENSANAG00000022133	SRP54	100	96.230	Aotus_nancymaae
ENSATEG00000013877	srp54	100	99.802	ENSACLG00000015866	srp54	100	99.802	Astatotilapia_calliptera
ENSATEG00000013877	srp54	100	98.016	ENSAMXG00000032669	SRP54	100	98.016	Astyanax_mexicanus
ENSATEG00000013877	srp54	100	96.230	ENSBTAG00000019085	SRP54	100	96.230	Bos_taurus
ENSATEG00000013877	srp54	98	72.892	WBGene00009012	F21D5.7	100	72.892	Caenorhabditis_elegans
ENSATEG00000013877	srp54	100	96.230	ENSCJAG00000006581	SRP54	100	96.230	Callithrix_jacchus
ENSATEG00000013877	srp54	100	96.230	ENSCAFG00000013331	SRP54	100	96.230	Canis_familiaris
ENSATEG00000013877	srp54	100	96.230	ENSCAFG00020023427	SRP54	100	96.230	Canis_lupus_dingo
ENSATEG00000013877	srp54	100	96.230	ENSCHIG00000026345	SRP54	100	96.230	Capra_hircus
ENSATEG00000013877	srp54	100	96.032	ENSTSYG00000002680	-	100	96.032	Carlito_syrichta
ENSATEG00000013877	srp54	94	84.632	ENSTSYG00000035333	-	93	84.632	Carlito_syrichta
ENSATEG00000013877	srp54	94	62.041	ENSCAPG00000008780	SRP54	100	62.041	Cavia_aperea
ENSATEG00000013877	srp54	100	95.833	ENSCPOG00000003691	SRP54	100	95.833	Cavia_porcellus
ENSATEG00000013877	srp54	90	95.714	ENSCCAG00000024179	SRP54	100	95.943	Cebus_capucinus
ENSATEG00000013877	srp54	100	96.230	ENSCATG00000034083	SRP54	100	96.230	Cercocebus_atys
ENSATEG00000013877	srp54	100	96.230	ENSCLAG00000015076	SRP54	100	96.230	Chinchilla_lanigera
ENSATEG00000013877	srp54	100	96.230	ENSCSAG00000015575	SRP54	100	96.230	Chlorocebus_sabaeus
ENSATEG00000013877	srp54	95	85.031	ENSCHOG00000008986	SRP54	100	85.031	Choloepus_hoffmanni
ENSATEG00000013877	srp54	100	96.230	ENSCPBG00000026195	SRP54	100	96.230	Chrysemys_picta_bellii
ENSATEG00000013877	srp54	100	82.937	ENSCING00000007380	-	100	82.937	Ciona_intestinalis
ENSATEG00000013877	srp54	100	96.230	ENSCANG00000028532	SRP54	100	96.230	Colobus_angolensis_palliatus
ENSATEG00000013877	srp54	100	96.230	ENSCGRG00001009525	-	100	96.230	Cricetulus_griseus_chok1gshd
ENSATEG00000013877	srp54	76	96.623	ENSCGRG00000009453	-	89	96.623	Cricetulus_griseus_crigri
ENSATEG00000013877	srp54	100	98.611	ENSCSEG00000012392	srp54	100	98.611	Cynoglossus_semilaevis
ENSATEG00000013877	srp54	100	99.405	ENSCVAG00000010395	srp54	100	99.405	Cyprinodon_variegatus
ENSATEG00000013877	srp54	100	98.413	ENSDARG00000098367	srp54	100	98.413	Danio_rerio
ENSATEG00000013877	srp54	100	96.230	ENSDNOG00000032525	SRP54	100	96.230	Dasypus_novemcinctus
ENSATEG00000013877	srp54	89	80.973	ENSDORG00000005159	-	98	80.973	Dipodomys_ordii
ENSATEG00000013877	srp54	96	79.175	FBgn0010747	Srp54k	98	78.715	Drosophila_melanogaster
ENSATEG00000013877	srp54	100	95.040	ENSETEG00000016307	-	100	95.040	Echinops_telfairi
ENSATEG00000013877	srp54	83	56.220	ENSETEG00000012102	-	99	56.220	Echinops_telfairi
ENSATEG00000013877	srp54	100	88.690	ENSEBUG00000009437	-	100	88.690	Eptatretus_burgeri
ENSATEG00000013877	srp54	100	96.230	ENSEASG00005002057	SRP54	100	96.230	Equus_asinus_asinus
ENSATEG00000013877	srp54	99	95.984	ENSECAG00000018042	SRP54	98	95.984	Equus_caballus
ENSATEG00000013877	srp54	100	80.357	ENSEEUG00000001511	SRP54	100	80.357	Erinaceus_europaeus
ENSATEG00000013877	srp54	100	98.016	ENSELUG00000003395	srp54	100	98.016	Esox_lucius
ENSATEG00000013877	srp54	100	96.032	ENSFCAG00000032033	SRP54	100	96.032	Felis_catus
ENSATEG00000013877	srp54	100	95.833	ENSFALG00000005995	SRP54	100	95.833	Ficedula_albicollis
ENSATEG00000013877	srp54	100	96.230	ENSFDAG00000016767	SRP54	100	96.230	Fukomys_damarensis
ENSATEG00000013877	srp54	100	99.008	ENSFHEG00000004263	srp54	100	99.008	Fundulus_heteroclitus
ENSATEG00000013877	srp54	95	92.678	ENSGMOG00000011391	srp54	100	92.678	Gadus_morhua
ENSATEG00000013877	srp54	100	95.833	ENSGALG00000023135	SRP54	100	95.833	Gallus_gallus
ENSATEG00000013877	srp54	100	99.603	ENSGAFG00000011586	srp54	100	99.603	Gambusia_affinis
ENSATEG00000013877	srp54	100	98.611	ENSGACG00000004181	srp54	100	98.611	Gasterosteus_aculeatus
ENSATEG00000013877	srp54	100	96.230	ENSGAGG00000014766	SRP54	100	96.230	Gopherus_agassizii
ENSATEG00000013877	srp54	100	96.230	ENSGGOG00000002926	SRP54	100	96.230	Gorilla_gorilla
ENSATEG00000013877	srp54	100	99.802	ENSHBUG00000005678	srp54	100	99.802	Haplochromis_burtoni
ENSATEG00000013877	srp54	100	96.230	ENSHGLG00000002850	SRP54	100	96.230	Heterocephalus_glaber_female
ENSATEG00000013877	srp54	100	66.931	ENSHGLG00100007281	-	100	66.931	Heterocephalus_glaber_male
ENSATEG00000013877	srp54	100	96.230	ENSHGLG00100005263	SRP54	100	96.230	Heterocephalus_glaber_male
ENSATEG00000013877	srp54	100	97.222	ENSHCOG00000021127	srp54	100	97.222	Hippocampus_comes
ENSATEG00000013877	srp54	100	97.619	ENSIPUG00000001420	srp54	100	97.619	Ictalurus_punctatus
ENSATEG00000013877	srp54	100	96.230	ENSSTOG00000016023	SRP54	100	96.230	Ictidomys_tridecemlineatus
ENSATEG00000013877	srp54	87	74.318	ENSJJAG00000016404	-	100	74.318	Jaculus_jaculus
ENSATEG00000013877	srp54	100	91.468	ENSJJAG00000013417	-	100	91.468	Jaculus_jaculus
ENSATEG00000013877	srp54	100	99.008	ENSKMAG00000007707	srp54	100	99.008	Kryptolebias_marmoratus
ENSATEG00000013877	srp54	100	99.603	ENSLBEG00000021122	srp54	100	99.603	Labrus_bergylta
ENSATEG00000013877	srp54	100	99.603	ENSLBEG00000018690	srp54	100	99.603	Labrus_bergylta
ENSATEG00000013877	srp54	100	95.437	ENSLACG00000017890	SRP54	100	95.437	Latimeria_chalumnae
ENSATEG00000013877	srp54	100	98.413	ENSLOCG00000009440	srp54	100	98.413	Lepisosteus_oculatus
ENSATEG00000013877	srp54	100	96.230	ENSLAFG00000012007	SRP54	100	96.230	Loxodonta_africana
ENSATEG00000013877	srp54	100	96.230	ENSMFAG00000044371	SRP54	100	96.230	Macaca_fascicularis
ENSATEG00000013877	srp54	100	96.230	ENSMMUG00000015073	FAM177A1	100	96.230	Macaca_mulatta
ENSATEG00000013877	srp54	100	96.230	ENSMNEG00000006947	SRP54	100	96.230	Macaca_nemestrina
ENSATEG00000013877	srp54	100	96.230	ENSMLEG00000042251	SRP54	100	96.230	Mandrillus_leucophaeus
ENSATEG00000013877	srp54	100	99.802	ENSMAMG00000004803	srp54	100	99.802	Mastacembelus_armatus
ENSATEG00000013877	srp54	100	99.802	ENSMZEG00005027528	srp54	100	99.802	Maylandia_zebra
ENSATEG00000013877	srp54	100	91.304	ENSMGAG00000012481	SRP54	100	91.304	Meleagris_gallopavo
ENSATEG00000013877	srp54	100	96.429	ENSMAUG00000014447	-	100	96.429	Mesocricetus_auratus
ENSATEG00000013877	srp54	100	96.230	ENSMICG00000010270	SRP54	100	96.230	Microcebus_murinus
ENSATEG00000013877	srp54	87	96.136	ENSMOCG00000000948	-	100	96.136	Microtus_ochrogaster
ENSATEG00000013877	srp54	90	96.696	ENSMMOG00000020303	srp54	99	96.696	Mola_mola
ENSATEG00000013877	srp54	100	96.230	ENSMODG00000023150	-	100	96.230	Monodelphis_domestica
ENSATEG00000013877	srp54	100	96.230	ENSMODG00000012925	-	100	96.230	Monodelphis_domestica
ENSATEG00000013877	srp54	88	99.323	ENSMALG00000009163	srp54	98	99.323	Monopterus_albus
ENSATEG00000013877	srp54	100	96.429	MGP_CAROLIEiJ_G0017754	-	100	96.429	Mus_caroli
ENSATEG00000013877	srp54	100	95.635	ENSMUSG00000079108	Srp54c	100	95.635	Mus_musculus
ENSATEG00000013877	srp54	100	96.429	ENSMUSG00000112449	Srp54b	100	96.429	Mus_musculus
ENSATEG00000013877	srp54	100	96.429	ENSMUSG00000073079	Srp54a	100	97.273	Mus_musculus
ENSATEG00000013877	srp54	100	96.429	MGP_PahariEiJ_G0029510	-	100	96.429	Mus_pahari
ENSATEG00000013877	srp54	100	96.230	ENSMPUG00000016302	SRP54	100	96.230	Mustela_putorius_furo
ENSATEG00000013877	srp54	100	95.635	ENSMLUG00000008958	SRP54	100	95.635	Myotis_lucifugus
ENSATEG00000013877	srp54	100	86.905	ENSNGAG00000019806	-	100	86.905	Nannospalax_galili
ENSATEG00000013877	srp54	87	99.773	ENSNBRG00000006000	srp54	100	99.773	Neolamprologus_brichardi
ENSATEG00000013877	srp54	100	96.230	ENSNLEG00000003496	SRP54	100	96.230	Nomascus_leucogenys
ENSATEG00000013877	srp54	67	98.214	ENSMEUG00000000138	-	76	98.214	Notamacropus_eugenii
ENSATEG00000013877	srp54	58	96.721	ENSOPRG00000014502	-	60	96.721	Ochotona_princeps
ENSATEG00000013877	srp54	100	96.230	ENSODEG00000004865	SRP54	100	96.230	Octodon_degus
ENSATEG00000013877	srp54	100	99.802	ENSONIG00000011768	srp54	100	99.802	Oreochromis_niloticus
ENSATEG00000013877	srp54	100	96.230	ENSOANG00000014051	SRP54	100	96.230	Ornithorhynchus_anatinus
ENSATEG00000013877	srp54	100	95.635	ENSOCUG00000007838	SRP54	100	95.635	Oryctolagus_cuniculus
ENSATEG00000013877	srp54	100	99.603	ENSORLG00000010027	srp54	100	99.603	Oryzias_latipes
ENSATEG00000013877	srp54	100	99.603	ENSORLG00020001878	srp54	100	99.603	Oryzias_latipes_hni
ENSATEG00000013877	srp54	100	99.603	ENSORLG00015021866	srp54	100	99.603	Oryzias_latipes_hsok
ENSATEG00000013877	srp54	100	99.405	ENSOMEG00000020952	srp54	100	99.405	Oryzias_melastigma
ENSATEG00000013877	srp54	100	96.230	ENSOGAG00000012188	SRP54	100	96.230	Otolemur_garnettii
ENSATEG00000013877	srp54	100	96.230	ENSOARG00000007160	SRP54	100	96.230	Ovis_aries
ENSATEG00000013877	srp54	100	96.230	ENSPPAG00000017434	SRP54	100	96.230	Pan_paniscus
ENSATEG00000013877	srp54	100	95.238	ENSPPRG00000014047	SRP54	100	95.238	Panthera_pardus
ENSATEG00000013877	srp54	100	96.032	ENSPTIG00000000744	SRP54	96	96.032	Panthera_tigris_altaica
ENSATEG00000013877	srp54	100	96.230	ENSPTRG00000006259	FAM177A1	100	96.230	Pan_troglodytes
ENSATEG00000013877	srp54	100	96.230	ENSPANG00000023853	SRP54	100	96.230	Papio_anubis
ENSATEG00000013877	srp54	100	97.817	ENSPKIG00000001953	srp54	100	97.817	Paramormyrops_kingsleyae
ENSATEG00000013877	srp54	100	96.032	ENSPSIG00000006476	SRP54	100	96.032	Pelodiscus_sinensis
ENSATEG00000013877	srp54	91	96.304	ENSPMGG00000004127	srp54	99	96.304	Periophthalmus_magnuspinnatus
ENSATEG00000013877	srp54	100	84.325	ENSPEMG00000019634	-	100	84.325	Peromyscus_maniculatus_bairdii
ENSATEG00000013877	srp54	100	90.278	ENSPMAG00000006078	-	100	90.278	Petromyzon_marinus
ENSATEG00000013877	srp54	100	96.230	ENSPCIG00000016175	SRP54	100	96.230	Phascolarctos_cinereus
ENSATEG00000013877	srp54	100	99.603	ENSPFOG00000008870	srp54	100	99.603	Poecilia_formosa
ENSATEG00000013877	srp54	100	99.603	ENSPLAG00000009889	srp54	100	99.603	Poecilia_latipinna
ENSATEG00000013877	srp54	100	99.603	ENSPMEG00000008601	srp54	100	99.603	Poecilia_mexicana
ENSATEG00000013877	srp54	100	99.603	ENSPREG00000004505	srp54	100	99.603	Poecilia_reticulata
ENSATEG00000013877	srp54	100	91.270	ENSPPYG00000005739	SRP54	100	91.270	Pongo_abelii
ENSATEG00000013877	srp54	100	92.460	ENSPCAG00000006268	SRP54	100	92.460	Procavia_capensis
ENSATEG00000013877	srp54	100	94.257	ENSPCOG00000022473	SRP54	100	94.257	Propithecus_coquereli
ENSATEG00000013877	srp54	63	97.872	ENSPVAG00000010056	SRP54	82	97.872	Pteropus_vampyrus
ENSATEG00000013877	srp54	100	99.802	ENSPNYG00000009717	srp54	100	99.802	Pundamilia_nyererei
ENSATEG00000013877	srp54	100	98.214	ENSPNAG00000008544	srp54	100	98.214	Pygocentrus_nattereri
ENSATEG00000013877	srp54	100	96.230	ENSRNOG00000032776	Srp54a	100	96.230	Rattus_norvegicus
ENSATEG00000013877	srp54	100	96.230	ENSRROG00000041292	SRP54	100	96.230	Rhinopithecus_roxellana
ENSATEG00000013877	srp54	86	51.701	YPR088C	SRP54	95	47.318	Saccharomyces_cerevisiae
ENSATEG00000013877	srp54	94	95.992	ENSSBOG00000035145	SRP54	100	95.992	Saimiri_boliviensis_boliviensis
ENSATEG00000013877	srp54	68	95.335	ENSSHAG00000000671	SRP54	100	95.335	Sarcophilus_harrisii
ENSATEG00000013877	srp54	100	98.214	ENSSFOG00015013920	srp54	100	98.214	Scleropages_formosus
ENSATEG00000013877	srp54	100	93.258	ENSSMAG00000002441	srp54	100	93.258	Scophthalmus_maximus
ENSATEG00000013877	srp54	100	99.206	ENSSDUG00000018586	srp54	100	99.206	Seriola_dumerili
ENSATEG00000013877	srp54	100	99.008	ENSSLDG00000010476	srp54	100	99.008	Seriola_lalandi_dorsalis
ENSATEG00000013877	srp54	100	96.230	ENSSARG00000002744	SRP54	100	96.230	Sorex_araneus
ENSATEG00000013877	srp54	100	96.230	ENSSPUG00000013101	SRP54	100	96.230	Sphenodon_punctatus
ENSATEG00000013877	srp54	100	99.405	ENSSPAG00000002354	srp54	100	99.405	Stegastes_partitus
ENSATEG00000013877	srp54	100	96.230	ENSSSCG00000001955	SRP54	100	96.230	Sus_scrofa
ENSATEG00000013877	srp54	94	95.570	ENSTGUG00000011945	-	95	95.570	Taeniopygia_guttata
ENSATEG00000013877	srp54	100	98.611	ENSTRUG00000007057	srp54	100	98.611	Takifugu_rubripes
ENSATEG00000013877	srp54	100	98.016	ENSTNIG00000002589	srp54	100	98.016	Tetraodon_nigroviridis
ENSATEG00000013877	srp54	89	87.472	ENSTBEG00000011409	SRP54	100	87.472	Tupaia_belangeri
ENSATEG00000013877	srp54	100	86.905	ENSTTRG00000000928	SRP54	100	86.905	Tursiops_truncatus
ENSATEG00000013877	srp54	52	97.328	ENSUAMG00000012385	SRP54	100	97.328	Ursus_americanus
ENSATEG00000013877	srp54	100	96.230	ENSUMAG00000011234	SRP54	100	96.230	Ursus_maritimus
ENSATEG00000013877	srp54	94	95.781	ENSVPAG00000005668	SRP54	100	95.781	Vicugna_pacos
ENSATEG00000013877	srp54	100	96.230	ENSVVUG00000019962	SRP54	100	96.230	Vulpes_vulpes
ENSATEG00000013877	srp54	100	81.262	ENSXETG00000012290	srp54	100	81.262	Xenopus_tropicalis
ENSATEG00000013877	srp54	88	99.549	ENSXCOG00000004658	srp54	96	99.549	Xiphophorus_couchianus
ENSATEG00000013877	srp54	100	99.603	ENSXMAG00000018315	srp54	100	99.603	Xiphophorus_maculatus