EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSATEG00000014525 (Gene tree)
Gene ID
113148660
Gene Symbol
CPSF3 (1 of many)
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Anabas_testudineus
Status
putative
Strand
Plus strand
Length
4104 bases
Position
chrOOHO01000007.1:10838111-10842214
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSATEP00000020876CPSF73-100_CPF11718.81.9e-2711
ENSATEP00000020876Beta-CaspPF10996.87.5e-3411
ENSATEP00000020876Lactamase_BPF00753.271.5e-1811
ENSATEP00000020876RMMBLPF07521.125.9e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSATET00000021234CPSF3 (1 of many)-2011974-ENSATEP00000020876657 (aa)--
Gene Model
Click here to download ENSATEG00000014525's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000014525's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSATEG00000014525CPSF38734.628ENSATEG00000024376ints119734.628
ENSATEG00000014525CPSF39984.470ENSATEG00000003959cpsf39984.470
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSATEG00000014525CPSF39883.235ENSG00000119203CPSF3100100.000Homo_sapiens
ENSATEG00000014525CPSF39984.593ENSAPOG00000022087cpsf39984.593Acanthochromis_polyacanthus
ENSATEG00000014525CPSF37899.216ENSAPOG00000012241CPSF39199.216Acanthochromis_polyacanthus
ENSATEG00000014525CPSF39883.529ENSAMEG00000008493CPSF39983.529Ailuropoda_melanoleuca
ENSATEG00000014525CPSF39081.340ENSACIG00000009846cpsf39981.340Amphilophus_citrinellus
ENSATEG00000014525CPSF39187.639ENSACIG00000023663CPSF310081.476Amphilophus_citrinellus
ENSATEG00000014525CPSF310090.290ENSAOCG00000010077CPSF310090.290Amphiprion_ocellaris
ENSATEG00000014525CPSF39984.302ENSAOCG00000022056cpsf39984.302Amphiprion_ocellaris
ENSATEG00000014525CPSF310090.290ENSAPEG00000021167CPSF310090.290Amphiprion_percula
ENSATEG00000014525CPSF39984.448ENSAPEG00000019526cpsf39985.236Amphiprion_percula
ENSATEG00000014525CPSF39782.712ENSAPLG00000006941CPSF39882.712Anas_platyrhynchos
ENSATEG00000014525CPSF39181.417ENSACAG00000001759CPSF39981.417Anolis_carolinensis
ENSATEG00000014525CPSF39877.827ENSANAG00000031254CPSF39978.144Aotus_nancymaae
ENSATEG00000014525CPSF39684.187ENSACLG00000014484cpsf39984.187Astatotilapia_calliptera
ENSATEG00000014525CPSF39788.114ENSACLG00000018846CPSF310081.910Astatotilapia_calliptera
ENSATEG00000014525CPSF310086.647ENSAMXG00000004786cpsf310086.647Astyanax_mexicanus
ENSATEG00000014525CPSF39883.529ENSBTAG00000019735CPSF39983.529Bos_taurus
ENSATEG00000014525CPSF39256.651WBGene00013460cpsf-39056.651Caenorhabditis_elegans
ENSATEG00000014525CPSF39883.088ENSCJAG00000006276CPSF39983.088Callithrix_jacchus
ENSATEG00000014525CPSF39883.529ENSCAFG00000003375CPSF39583.529Canis_familiaris
ENSATEG00000014525CPSF38988.629ENSCAFG00020026799CPSF39788.629Canis_lupus_dingo
ENSATEG00000014525CPSF39883.529ENSCHIG00000013973CPSF39983.529Capra_hircus
ENSATEG00000014525CPSF39883.235ENSTSYG00000002967CPSF39983.235Carlito_syrichta
ENSATEG00000014525CPSF39683.333ENSCAPG00000013851CPSF39983.333Cavia_aperea
ENSATEG00000014525CPSF39883.529ENSCPOG00000011299CPSF39983.529Cavia_porcellus
ENSATEG00000014525CPSF39883.088ENSCCAG00000036730CPSF39983.088Cebus_capucinus
ENSATEG00000014525CPSF39883.258ENSCATG00000014770CPSF39495.208Cercocebus_atys
ENSATEG00000014525CPSF39883.529ENSCLAG00000002727CPSF39983.529Chinchilla_lanigera
ENSATEG00000014525CPSF39875.294ENSCSAG00000007125CPSF39975.294Chlorocebus_sabaeus
ENSATEG00000014525CPSF385100.000ENSCHOG00000000180CPSF38558.875Choloepus_hoffmanni
ENSATEG00000014525CPSF39982.754ENSCPBG00000014074CPSF39982.754Chrysemys_picta_bellii
ENSATEG00000014525CPSF39865.160ENSCING00000007214-9865.160Ciona_intestinalis
ENSATEG00000014525CPSF39875.559ENSCANG00000034435CPSF39975.559Colobus_angolensis_palliatus
ENSATEG00000014525CPSF39883.088ENSCGRG00001013134Cpsf39983.088Cricetulus_griseus_chok1gshd
ENSATEG00000014525CPSF39883.088ENSCGRG00000018319Cpsf39983.088Cricetulus_griseus_crigri
ENSATEG00000014525CPSF310087.410ENSCSEG00000002021CPSF310087.410Cynoglossus_semilaevis
ENSATEG00000014525CPSF310088.406ENSCVAG00000015067CPSF310088.406Cyprinodon_variegatus
ENSATEG00000014525CPSF310085.507ENSDARG00000027649cpsf310085.507Danio_rerio
ENSATEG00000014525CPSF39882.526ENSDNOG00000008940CPSF39582.526Dasypus_novemcinctus
ENSATEG00000014525CPSF39384.105ENSDORG00000014263Cpsf39984.105Dipodomys_ordii
ENSATEG00000014525CPSF39864.402FBgn0261065Cpsf739864.349Drosophila_melanogaster
ENSATEG00000014525CPSF39372.222ENSETEG00000003893CPSF39972.222Echinops_telfairi
ENSATEG00000014525CPSF39974.189ENSEBUG00000009018cpsf39974.612Eptatretus_burgeri
ENSATEG00000014525CPSF39883.529ENSEASG00005003970CPSF39983.529Equus_asinus_asinus
ENSATEG00000014525CPSF39883.529ENSECAG00000019911CPSF39689.207Equus_caballus
ENSATEG00000014525CPSF39868.676ENSEEUG00000015422CPSF39968.676Erinaceus_europaeus
ENSATEG00000014525CPSF39985.901ENSELUG00000013775cpsf39985.901Esox_lucius
ENSATEG00000014525CPSF39883.529ENSFCAG00000007852CPSF39983.529Felis_catus
ENSATEG00000014525CPSF39382.198ENSFALG00000006572CPSF39982.198Ficedula_albicollis
ENSATEG00000014525CPSF39882.916ENSFDAG00000006317CPSF39982.916Fukomys_damarensis
ENSATEG00000014525CPSF35767.805ENSFHEG00000012186CPSF310067.805Fundulus_heteroclitus
ENSATEG00000014525CPSF39982.849ENSFHEG00000014774cpsf39982.849Fundulus_heteroclitus
ENSATEG00000014525CPSF39984.035ENSGMOG00000003157cpsf39984.035Gadus_morhua
ENSATEG00000014525CPSF39982.703ENSGALG00000016424CPSF39982.703Gallus_gallus
ENSATEG00000014525CPSF310088.116ENSGAFG00000008016CPSF310088.116Gambusia_affinis
ENSATEG00000014525CPSF39080.671ENSGAFG00000019449cpsf310074.964Gambusia_affinis
ENSATEG00000014525CPSF36676.660ENSGAGG00000025583CPSF39376.660Gopherus_agassizii
ENSATEG00000014525CPSF39881.151ENSGGOG00000001757CPSF39198.065Gorilla_gorilla
ENSATEG00000014525CPSF39984.157ENSHBUG00000001188cpsf39984.157Haplochromis_burtoni
ENSATEG00000014525CPSF35785.075ENSHBUG00000014332CPSF310085.075Haplochromis_burtoni
ENSATEG00000014525CPSF39883.505ENSHGLG00000000666CPSF39883.505Heterocephalus_glaber_female
ENSATEG00000014525CPSF39883.505ENSHGLG00100007765CPSF39883.505Heterocephalus_glaber_male
ENSATEG00000014525CPSF39983.599ENSHCOG00000007251cpsf39983.599Hippocampus_comes
ENSATEG00000014525CPSF39987.663ENSHCOG00000015957CPSF39987.663Hippocampus_comes
ENSATEG00000014525CPSF310085.362ENSIPUG00000023488cpsf310085.362Ictalurus_punctatus
ENSATEG00000014525CPSF39883.529ENSSTOG00000004476CPSF39983.529Ictidomys_tridecemlineatus
ENSATEG00000014525CPSF39882.647ENSJJAG00000023415Cpsf39982.647Jaculus_jaculus
ENSATEG00000014525CPSF310089.420ENSKMAG00000007317CPSF310089.420Kryptolebias_marmoratus
ENSATEG00000014525CPSF39982.994ENSKMAG00000002806cpsf39982.994Kryptolebias_marmoratus
ENSATEG00000014525CPSF39590.715ENSLBEG00000013492CPSF39990.715Labrus_bergylta
ENSATEG00000014525CPSF39980.924ENSLBEG00000020569cpsf39680.924Labrus_bergylta
ENSATEG00000014525CPSF35276.839ENSLBEG00000015018-9976.839Labrus_bergylta
ENSATEG00000014525CPSF310076.700ENSLACG00000008308CPSF310076.700Latimeria_chalumnae
ENSATEG00000014525CPSF310084.993ENSLOCG00000016823cpsf310084.993Lepisosteus_oculatus
ENSATEG00000014525CPSF39882.032ENSLAFG00000009467CPSF39982.032Loxodonta_africana
ENSATEG00000014525CPSF39883.088ENSMFAG00000001339CPSF39495.208Macaca_fascicularis
ENSATEG00000014525CPSF39087.809ENSMMUG00000018038CPSF39295.208Macaca_mulatta
ENSATEG00000014525CPSF38998.000ENSMNEG00000039447CPSF39998.000Macaca_nemestrina
ENSATEG00000014525CPSF39883.235ENSMLEG00000026825CPSF39297.854Mandrillus_leucophaeus
ENSATEG00000014525CPSF39984.448ENSMAMG00000003076cpsf39984.448Mastacembelus_armatus
ENSATEG00000014525CPSF39789.137ENSMAMG00000008835CPSF310083.236Mastacembelus_armatus
ENSATEG00000014525CPSF39984.157ENSMZEG00005014358cpsf39984.157Maylandia_zebra
ENSATEG00000014525CPSF310090.290ENSMZEG00005006258CPSF310090.290Maylandia_zebra
ENSATEG00000014525CPSF39682.733ENSMGAG00000013995CPSF39982.733Meleagris_gallopavo
ENSATEG00000014525CPSF35269.867ENSMAUG00000000166Cpsf39969.867Mesocricetus_auratus
ENSATEG00000014525CPSF39878.529ENSMICG00000002363CPSF39978.529Microcebus_murinus
ENSATEG00000014525CPSF39882.883ENSMOCG00000020067Cpsf39982.883Microtus_ochrogaster
ENSATEG00000014525CPSF37972.619ENSMMOG00000011923CPSF38579.286Mola_mola
ENSATEG00000014525CPSF39383.546ENSMMOG00000018212CPSF39883.546Mola_mola
ENSATEG00000014525CPSF39882.387ENSMODG00000014703CPSF39982.387Monodelphis_domestica
ENSATEG00000014525CPSF39184.555ENSMALG00000011474CPSF310084.555Monopterus_albus
ENSATEG00000014525CPSF39984.325ENSMALG00000016416cpsf39984.325Monopterus_albus
ENSATEG00000014525CPSF39883.235MGP_CAROLIEiJ_G0017640Cpsf39983.235Mus_caroli
ENSATEG00000014525CPSF39883.235ENSMUSG00000054309Cpsf39698.305Mus_musculus
ENSATEG00000014525CPSF39883.088MGP_PahariEiJ_G0029397Cpsf39983.088Mus_pahari
ENSATEG00000014525CPSF39883.235MGP_SPRETEiJ_G0018481Cpsf39983.235Mus_spretus
ENSATEG00000014525CPSF39883.358ENSMPUG00000013213CPSF39983.358Mustela_putorius_furo
ENSATEG00000014525CPSF39883.260ENSMLUG00000010636CPSF39983.260Myotis_lucifugus
ENSATEG00000014525CPSF39882.941ENSNGAG00000019836Cpsf39982.941Nannospalax_galili
ENSATEG00000014525CPSF39788.114ENSNBRG00000010525CPSF310081.910Neolamprologus_brichardi
ENSATEG00000014525CPSF39983.576ENSNBRG00000004770cpsf39983.576Neolamprologus_brichardi
ENSATEG00000014525CPSF39883.088ENSNLEG00000013359CPSF39198.065Nomascus_leucogenys
ENSATEG00000014525CPSF39852.601ENSMEUG00000013117-9952.601Notamacropus_eugenii
ENSATEG00000014525CPSF39874.816ENSOPRG00000008902CPSF39974.816Ochotona_princeps
ENSATEG00000014525CPSF39884.265ENSODEG00000003129CPSF39984.265Octodon_degus
ENSATEG00000014525CPSF39984.884ENSONIG00000018812cpsf39984.884Oreochromis_niloticus
ENSATEG00000014525CPSF38180.107ENSOANG00000008577CPSF39980.107Ornithorhynchus_anatinus
ENSATEG00000014525CPSF39883.235ENSOCUG00000003728CPSF39983.235Oryctolagus_cuniculus
ENSATEG00000014525CPSF39982.413ENSORLG00000018854cpsf39982.413Oryzias_latipes
ENSATEG00000014525CPSF39982.267ENSORLG00020013331cpsf39982.267Oryzias_latipes_hni
ENSATEG00000014525CPSF39982.413ENSORLG00015011017cpsf39982.413Oryzias_latipes_hsok
ENSATEG00000014525CPSF39982.703ENSOMEG00000010647cpsf39582.703Oryzias_melastigma
ENSATEG00000014525CPSF39873.088ENSOGAG00000001680CPSF39973.088Otolemur_garnettii
ENSATEG00000014525CPSF39883.529ENSOARG00000015073CPSF39983.529Ovis_aries
ENSATEG00000014525CPSF39883.235ENSPPAG00000042457CPSF39198.065Pan_paniscus
ENSATEG00000014525CPSF39883.529ENSPPRG00000016790CPSF39983.529Panthera_pardus
ENSATEG00000014525CPSF39883.652ENSPTIG00000003920CPSF39983.652Panthera_tigris_altaica
ENSATEG00000014525CPSF39883.235ENSPTRG00000011638CPSF39198.065Pan_troglodytes
ENSATEG00000014525CPSF39883.088ENSPANG00000016798CPSF39495.208Papio_anubis
ENSATEG00000014525CPSF310086.232ENSPKIG00000023646cpsf310086.232Paramormyrops_kingsleyae
ENSATEG00000014525CPSF39882.379ENSPSIG00000016144CPSF39982.379Pelodiscus_sinensis
ENSATEG00000014525CPSF35780.798ENSPMGG00000015311CPSF310080.798Periophthalmus_magnuspinnatus
ENSATEG00000014525CPSF39080.524ENSPMGG00000006141-9974.702Periophthalmus_magnuspinnatus
ENSATEG00000014525CPSF39883.529ENSPEMG00000017668Cpsf39983.529Peromyscus_maniculatus_bairdii
ENSATEG00000014525CPSF37790.980ENSPMAG00000004841cpsf39490.980Petromyzon_marinus
ENSATEG00000014525CPSF39683.183ENSPCIG00000009823CPSF39883.436Phascolarctos_cinereus
ENSATEG00000014525CPSF39982.994ENSPFOG00000015922cpsf39982.994Poecilia_formosa
ENSATEG00000014525CPSF310087.536ENSPFOG00000010418-10087.536Poecilia_formosa
ENSATEG00000014525CPSF35780.494ENSPLAG00000021300-10080.494Poecilia_latipinna
ENSATEG00000014525CPSF39982.994ENSPLAG00000000882cpsf39982.994Poecilia_latipinna
ENSATEG00000014525CPSF39983.140ENSPMEG00000018309cpsf39983.140Poecilia_mexicana
ENSATEG00000014525CPSF39081.250ENSPREG00000014875cpsf310075.474Poecilia_reticulata
ENSATEG00000014525CPSF310085.023ENSPREG00000004482CPSF310085.023Poecilia_reticulata
ENSATEG00000014525CPSF39878.971ENSPPYG00000012666CPSF39978.971Pongo_abelii
ENSATEG00000014525CPSF37070.779ENSPCAG00000015042CPSF37170.779Procavia_capensis
ENSATEG00000014525CPSF38690.323ENSPCOG00000023016CPSF39790.323Propithecus_coquereli
ENSATEG00000014525CPSF39883.358ENSPVAG00000005324CPSF39983.358Pteropus_vampyrus
ENSATEG00000014525CPSF39984.157ENSPNYG00000004405cpsf39984.157Pundamilia_nyererei
ENSATEG00000014525CPSF39287.652ENSPNYG00000021047CPSF39680.945Pundamilia_nyererei
ENSATEG00000014525CPSF310085.507ENSPNAG00000023060cpsf310085.507Pygocentrus_nattereri
ENSATEG00000014525CPSF39882.966ENSRNOG00000052418Cpsf39982.966Rattus_norvegicus
ENSATEG00000014525CPSF39879.671ENSRBIG00000041615CPSF39980.472Rhinopithecus_bieti
ENSATEG00000014525CPSF39883.235ENSRROG00000033792CPSF39983.235Rhinopithecus_roxellana
ENSATEG00000014525CPSF38642.640YLR277CYSH18542.640Saccharomyces_cerevisiae
ENSATEG00000014525CPSF39679.671ENSSBOG00000027263CPSF39779.671Saimiri_boliviensis_boliviensis
ENSATEG00000014525CPSF39883.235ENSSHAG00000007024CPSF39983.235Sarcophilus_harrisii
ENSATEG00000014525CPSF310086.087ENSSFOG00015002108cpsf310086.087Scleropages_formosus
ENSATEG00000014525CPSF39590.881ENSSMAG00000020534CPSF39790.881Scophthalmus_maximus
ENSATEG00000014525CPSF310090.725ENSSDUG00000018498CPSF310090.725Seriola_dumerili
ENSATEG00000014525CPSF39984.593ENSSDUG00000002828cpsf39784.593Seriola_dumerili
ENSATEG00000014525CPSF39984.738ENSSLDG00000008469cpsf39784.738Seriola_lalandi_dorsalis
ENSATEG00000014525CPSF310090.725ENSSLDG00000005234CPSF310090.725Seriola_lalandi_dorsalis
ENSATEG00000014525CPSF38784.024ENSSARG00000005186CPSF38384.024Sorex_araneus
ENSATEG00000014525CPSF39681.045ENSSPUG00000015525CPSF39781.045Sphenodon_punctatus
ENSATEG00000014525CPSF310090.145ENSSPAG00000002906CPSF310090.145Stegastes_partitus
ENSATEG00000014525CPSF39984.738ENSSPAG00000018579cpsf39984.738Stegastes_partitus
ENSATEG00000014525CPSF39883.676ENSSSCG00000020799CPSF39983.676Sus_scrofa
ENSATEG00000014525CPSF39982.577ENSTGUG00000013016CPSF39982.577Taeniopygia_guttata
ENSATEG00000014525CPSF35783.990ENSTRUG00000013905CPSF310083.990Takifugu_rubripes
ENSATEG00000014525CPSF39984.157ENSTRUG00000007030cpsf39884.157Takifugu_rubripes
ENSATEG00000014525CPSF38391.989ENSTBEG00000002707CPSF38491.989Tupaia_belangeri
ENSATEG00000014525CPSF38474.939ENSTTRG00000000861CPSF38374.939Tursiops_truncatus
ENSATEG00000014525CPSF39583.915ENSUAMG00000007535CPSF39483.915Ursus_americanus
ENSATEG00000014525CPSF39382.817ENSUMAG00000003676CPSF39488.909Ursus_maritimus
ENSATEG00000014525CPSF39184.385ENSVPAG00000008041CPSF310084.385Vicugna_pacos
ENSATEG00000014525CPSF39883.529ENSVVUG00000002194CPSF39983.529Vulpes_vulpes
ENSATEG00000014525CPSF39982.003ENSXETG00000008263cpsf39982.003Xenopus_tropicalis
ENSATEG00000014525CPSF39983.090ENSXCOG00000019695cpsf39983.090Xiphophorus_couchianus
ENSATEG00000014525CPSF35278.226ENSXCOG00000000957-8778.226Xiphophorus_couchianus
ENSATEG00000014525CPSF310087.681ENSXMAG00000027291CPSF310087.681Xiphophorus_maculatus
ENSATEG00000014525CPSF39982.874ENSXMAG00000009784cpsf310082.198Xiphophorus_maculatus

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