EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000014985 (Gene tree)
Gene ID: 113171988
Gene Symbol: cirbpa
Alias: cirbp|wu:fb12c11|wu:fi20g12|zgc:136559
Full Name: cold inducible RNA binding protein
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 4153 bases
Position: chrOOHO01000003.1:15997159-16001311
Accession: 113171988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000021584	RRM_1	PF00076.22	1.4e-26	1	1
ENSATEP00000021575	RRM_1	PF00076.22	1.4e-26	1	1
ENSATEP00000021591	RRM_1	PF00076.22	1.4e-26	1	1
ENSATEP00000021609	RRM_1	PF00076.22	1.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000021970	-	705	-	ENSATEP00000021609	183 (aa)	XP_026230528	UPI000E465CE1
ENSATET00000021945	-	1364	-	ENSATEP00000021584	181 (aa)	-	-
ENSATET00000021935	-	1362	-	ENSATEP00000021575	183 (aa)	-	-
ENSATET00000021952	-	1392	-	ENSATEP00000021591	183 (aa)	XP_026230528	UPI000E465CE1

Gene Model

Click here to download ENSATEG00000014985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000014985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000014985	cirbpa	85	44.156	ENSATEG00000010498	msi2a	54	47.297
ENSATEG00000014985	cirbpa	50	35.870	ENSATEG00000006193	srsf3b	58	35.870
ENSATEG00000014985	cirbpa	50	33.696	ENSATEG00000011511	-	52	33.696
ENSATEG00000014985	cirbpa	50	37.500	ENSATEG00000006741	-	64	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000014985	cirbpa	71	88.372	ENSAPOG00000004458	cirbpa	100	72.222	Acanthochromis_polyacanthus
ENSATEG00000014985	cirbpa	99	86.740	ENSACIG00000016116	cirbpa	100	81.081	Amphilophus_citrinellus
ENSATEG00000014985	cirbpa	100	70.430	ENSAOCG00000016212	cirbpa	100	80.645	Amphiprion_ocellaris
ENSATEG00000014985	cirbpa	100	70.811	ENSAPEG00000011989	cirbpa	100	81.622	Amphiprion_percula
ENSATEG00000014985	cirbpa	99	89.011	ENSACLG00000002094	-	100	87.912	Astatotilapia_calliptera
ENSATEG00000014985	cirbpa	100	52.404	ENSAMXG00000015612	cirbpb	82	60.656	Astyanax_mexicanus
ENSATEG00000014985	cirbpa	100	64.767	ENSCSEG00000014344	cirbpa	100	67.876	Cynoglossus_semilaevis
ENSATEG00000014985	cirbpa	100	77.297	ENSCVAG00000004853	cirbpa	100	79.121	Cyprinodon_variegatus
ENSATEG00000014985	cirbpa	100	58.824	ENSDARG00000103672	cirbpa	100	57.979	Danio_rerio
ENSATEG00000014985	cirbpa	99	75.824	ENSFHEG00000002580	cirbpa	100	80.874	Fundulus_heteroclitus
ENSATEG00000014985	cirbpa	99	55.051	ENSGMOG00000007179	cirbpb	98	53.807	Gadus_morhua
ENSATEG00000014985	cirbpa	100	74.595	ENSGAFG00000008654	cirbpa	100	80.541	Gambusia_affinis
ENSATEG00000014985	cirbpa	100	61.749	ENSGACG00000014978	-	100	61.202	Gasterosteus_aculeatus
ENSATEG00000014985	cirbpa	100	66.667	ENSGACG00000015206	cirbpa	100	70.000	Gasterosteus_aculeatus
ENSATEG00000014985	cirbpa	100	88.108	ENSHBUG00000022060	cirbpa	100	87.912	Haplochromis_burtoni
ENSATEG00000014985	cirbpa	100	78.804	ENSKMAG00000005905	cirbpa	100	76.374	Kryptolebias_marmoratus
ENSATEG00000014985	cirbpa	60	79.091	ENSLBEG00000027731	-	78	78.125	Labrus_bergylta
ENSATEG00000014985	cirbpa	100	62.842	ENSLBEG00000000292	cirbpa	100	62.295	Labrus_bergylta
ENSATEG00000014985	cirbpa	100	91.257	ENSMAMG00000010168	cirbpa	100	91.803	Mastacembelus_armatus
ENSATEG00000014985	cirbpa	100	88.108	ENSMZEG00005025577	-	100	87.912	Maylandia_zebra
ENSATEG00000014985	cirbpa	100	84.530	ENSMALG00000020092	cirbpa	100	85.083	Monopterus_albus
ENSATEG00000014985	cirbpa	100	88.108	ENSNBRG00000019658	cirbpa	100	87.912	Neolamprologus_brichardi
ENSATEG00000014985	cirbpa	99	85.635	ENSONIG00000010169	cirbpa	100	80.000	Oreochromis_niloticus
ENSATEG00000014985	cirbpa	100	80.435	ENSORLG00000015433	cirbpa	100	82.065	Oryzias_latipes
ENSATEG00000014985	cirbpa	100	80.435	ENSORLG00020016909	cirbpa	100	82.065	Oryzias_latipes_hni
ENSATEG00000014985	cirbpa	100	80.435	ENSORLG00015016636	cirbpa	100	82.065	Oryzias_latipes_hsok
ENSATEG00000014985	cirbpa	100	85.792	ENSOMEG00000021469	cirbpa	73	83.607	Oryzias_melastigma
ENSATEG00000014985	cirbpa	99	69.780	ENSPMGG00000017342	cirbpa	95	72.043	Periophthalmus_magnuspinnatus
ENSATEG00000014985	cirbpa	100	79.144	ENSPFOG00000015653	cirbpa	100	84.699	Poecilia_formosa
ENSATEG00000014985	cirbpa	99	79.670	ENSPLAG00000011125	cirbpa	100	85.246	Poecilia_latipinna
ENSATEG00000014985	cirbpa	100	79.570	ENSPMEG00000013878	cirbpa	100	85.246	Poecilia_mexicana
ENSATEG00000014985	cirbpa	99	82.222	ENSPREG00000018042	cirbpa	98	85.792	Poecilia_reticulata
ENSATEG00000014985	cirbpa	100	88.108	ENSPNYG00000007198	-	100	87.568	Pundamilia_nyererei
ENSATEG00000014985	cirbpa	100	56.311	ENSPNAG00000019997	cirbpb	100	57.767	Pygocentrus_nattereri
ENSATEG00000014985	cirbpa	100	61.497	ENSSFOG00015005346	cirbpb	100	63.492	Scleropages_formosus
ENSATEG00000014985	cirbpa	100	70.408	ENSSMAG00000002412	cirbpa	100	68.528	Scophthalmus_maximus
ENSATEG00000014985	cirbpa	100	71.038	ENSSDUG00000016099	cirbpa	100	70.492	Seriola_dumerili
ENSATEG00000014985	cirbpa	60	92.661	ENSSLDG00000011320	cirbpa	53	92.661	Seriola_lalandi_dorsalis
ENSATEG00000014985	cirbpa	100	67.760	ENSSPAG00000023037	cirbpa	99	66.845	Stegastes_partitus
ENSATEG00000014985	cirbpa	100	68.508	ENSTRUG00000010187	cirbpa	100	70.166	Takifugu_rubripes
ENSATEG00000014985	cirbpa	100	80.874	ENSTNIG00000000450	cirbpa	100	80.874	Tetraodon_nigroviridis
ENSATEG00000014985	cirbpa	99	81.667	ENSXCOG00000008262	cirbpa	99	84.699	Xiphophorus_couchianus
ENSATEG00000014985	cirbpa	100	81.522	ENSXMAG00000019336	cirbpa	100	85.326	Xiphophorus_maculatus