EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000015385 (Gene tree)
Gene ID: 113170403
Gene Symbol: smfn
Alias: zgc:73191
Full Name: small fragment nuclease
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 11375 bases
Position: chrOOHO01000006.1:333258-344632
Accession: ZDB-GENE-040426-1709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000022172	RNase_T	PF00929.24	2.7e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000022537	-	2927	-	ENSATEP00000022172	279 (aa)	-	-

Gene Model

Click here to download ENSATEG00000015385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000015385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000015385	smfn	81	71.806	ENSG00000076043	REXO2	99	80.108	Homo_sapiens
ENSATEG00000015385	smfn	72	79.602	ENSAMEG00000013263	REXO2	85	79.602	Ailuropoda_melanoleuca
ENSATEG00000015385	smfn	67	87.634	ENSACIG00000023553	smfn	100	87.634	Amphilophus_citrinellus
ENSATEG00000015385	smfn	97	74.444	ENSAPEG00000012435	smfn	98	74.444	Amphiprion_percula
ENSATEG00000015385	smfn	69	77.604	ENSAPLG00000005045	REXO2	94	77.604	Anas_platyrhynchos
ENSATEG00000015385	smfn	66	70.492	ENSACAG00000011631	REXO2	86	70.492	Anolis_carolinensis
ENSATEG00000015385	smfn	81	72.687	ENSANAG00000020834	REXO2	96	72.687	Aotus_nancymaae
ENSATEG00000015385	smfn	97	71.324	ENSACLG00000024566	smfn	95	87.845	Astatotilapia_calliptera
ENSATEG00000015385	smfn	72	79.602	ENSBTAG00000005843	REXO2	85	79.602	Bos_taurus
ENSATEG00000015385	smfn	66	47.541	WBGene00007429	C08B6.8	93	57.534	Caenorhabditis_elegans
ENSATEG00000015385	smfn	81	72.247	ENSCJAG00000012434	REXO2	96	72.247	Callithrix_jacchus
ENSATEG00000015385	smfn	81	71.366	ENSCAFG00000013511	REXO2	96	71.366	Canis_familiaris
ENSATEG00000015385	smfn	81	72.247	ENSCAFG00020002513	REXO2	96	72.247	Canis_lupus_dingo
ENSATEG00000015385	smfn	81	72.247	ENSCHIG00000009264	REXO2	96	72.247	Capra_hircus
ENSATEG00000015385	smfn	72	79.602	ENSTSYG00000002237	REXO2	85	79.602	Carlito_syrichta
ENSATEG00000015385	smfn	69	69.948	ENSTSYG00000027948	-	99	69.948	Carlito_syrichta
ENSATEG00000015385	smfn	67	81.183	ENSCAPG00000006093	REXO2	99	81.183	Cavia_aperea
ENSATEG00000015385	smfn	81	73.128	ENSCPOG00000010548	REXO2	96	73.128	Cavia_porcellus
ENSATEG00000015385	smfn	81	72.687	ENSCCAG00000034979	REXO2	96	72.687	Cebus_capucinus
ENSATEG00000015385	smfn	81	71.806	ENSCATG00000015278	REXO2	96	71.806	Cercocebus_atys
ENSATEG00000015385	smfn	73	79.412	ENSCLAG00000011195	REXO2	86	79.412	Chinchilla_lanigera
ENSATEG00000015385	smfn	81	71.806	ENSCSAG00000002754	REXO2	96	71.806	Chlorocebus_sabaeus
ENSATEG00000015385	smfn	81	70.925	ENSCHOG00000000642	-	96	70.925	Choloepus_hoffmanni
ENSATEG00000015385	smfn	51	73.427	ENSCPBG00000009359	REXO2	99	73.427	Chrysemys_picta_bellii
ENSATEG00000015385	smfn	71	58.376	ENSCING00000009858	-	95	58.376	Ciona_intestinalis
ENSATEG00000015385	smfn	81	71.806	ENSCANG00000034756	REXO2	96	71.806	Colobus_angolensis_palliatus
ENSATEG00000015385	smfn	81	73.568	ENSCGRG00001019814	-	96	73.568	Cricetulus_griseus_chok1gshd
ENSATEG00000015385	smfn	72	78.109	ENSCGRG00001010922	-	98	78.109	Cricetulus_griseus_chok1gshd
ENSATEG00000015385	smfn	72	79.602	ENSCGRG00001013673	-	98	79.602	Cricetulus_griseus_chok1gshd
ENSATEG00000015385	smfn	81	73.568	ENSCGRG00000006235	Rexo2	96	73.568	Cricetulus_griseus_crigri
ENSATEG00000015385	smfn	96	68.889	ENSCSEG00000007214	smfn	96	68.889	Cynoglossus_semilaevis
ENSATEG00000015385	smfn	65	84.444	ENSCVAG00000012008	smfn	97	84.444	Cyprinodon_variegatus
ENSATEG00000015385	smfn	70	80.412	ENSDARG00000009806	smfn	74	80.412	Danio_rerio
ENSATEG00000015385	smfn	63	82.286	ENSDNOG00000046533	REXO2	84	82.286	Dasypus_novemcinctus
ENSATEG00000015385	smfn	69	62.694	ENSDORG00000025142	-	86	61.929	Dipodomys_ordii
ENSATEG00000015385	smfn	81	72.687	ENSDORG00000011255	Rexo2	96	72.687	Dipodomys_ordii
ENSATEG00000015385	smfn	62	54.023	FBgn0039115	CG10214	82	54.023	Drosophila_melanogaster
ENSATEG00000015385	smfn	72	70.244	ENSEBUG00000013964	REXO2	70	70.244	Eptatretus_burgeri
ENSATEG00000015385	smfn	76	76.777	ENSEASG00005006674	REXO2	89	76.777	Equus_asinus_asinus
ENSATEG00000015385	smfn	76	76.777	ENSECAG00000005988	REXO2	89	76.777	Equus_caballus
ENSATEG00000015385	smfn	99	62.199	ENSELUG00000020072	smfn	99	62.199	Esox_lucius
ENSATEG00000015385	smfn	81	72.247	ENSFCAG00000018632	REXO2	96	72.247	Felis_catus
ENSATEG00000015385	smfn	67	78.610	ENSFALG00000010044	REXO2	93	78.610	Ficedula_albicollis
ENSATEG00000015385	smfn	81	73.128	ENSFDAG00000011764	REXO2	96	73.128	Fukomys_damarensis
ENSATEG00000015385	smfn	67	81.720	ENSGMOG00000006370	smfn	96	81.720	Gadus_morhua
ENSATEG00000015385	smfn	70	78.974	ENSGALG00000035980	REXO2	85	78.680	Gallus_gallus
ENSATEG00000015385	smfn	76	82.075	ENSGAFG00000015349	smfn	76	82.075	Gambusia_affinis
ENSATEG00000015385	smfn	67	87.166	ENSGACG00000020096	smfn	92	87.166	Gasterosteus_aculeatus
ENSATEG00000015385	smfn	82	71.491	ENSGAGG00000021126	REXO2	95	71.491	Gopherus_agassizii
ENSATEG00000015385	smfn	81	71.806	ENSGGOG00000023267	REXO2	96	71.806	Gorilla_gorilla
ENSATEG00000015385	smfn	97	54.044	ENSHBUG00000020097	REXO2	99	54.044	Haplochromis_burtoni
ENSATEG00000015385	smfn	81	72.687	ENSHGLG00000013556	REXO2	96	72.687	Heterocephalus_glaber_female
ENSATEG00000015385	smfn	81	73.128	ENSHGLG00100005257	REXO2	96	73.128	Heterocephalus_glaber_male
ENSATEG00000015385	smfn	65	81.111	ENSHCOG00000007122	smfn	98	81.111	Hippocampus_comes
ENSATEG00000015385	smfn	71	82.412	ENSIPUG00000020440	rexo2	75	81.373	Ictalurus_punctatus
ENSATEG00000015385	smfn	81	72.687	ENSSTOG00000012465	REXO2	96	72.687	Ictidomys_tridecemlineatus
ENSATEG00000015385	smfn	72	56.931	ENSJJAG00000022605	-	81	56.931	Jaculus_jaculus
ENSATEG00000015385	smfn	81	72.687	ENSJJAG00000013710	-	96	72.687	Jaculus_jaculus
ENSATEG00000015385	smfn	70	84.615	ENSKMAG00000016795	smfn	81	77.293	Kryptolebias_marmoratus
ENSATEG00000015385	smfn	66	85.326	ENSLBEG00000006021	smfn	97	85.326	Labrus_bergylta
ENSATEG00000015385	smfn	71	70.647	ENSLACG00000018623	REXO2	82	70.647	Latimeria_chalumnae
ENSATEG00000015385	smfn	71	81.910	ENSLOCG00000002389	smfn	95	81.910	Lepisosteus_oculatus
ENSATEG00000015385	smfn	71	80.402	ENSLAFG00000012451	REXO2	85	80.100	Loxodonta_africana
ENSATEG00000015385	smfn	81	71.806	ENSMFAG00000041155	REXO2	96	71.806	Macaca_fascicularis
ENSATEG00000015385	smfn	81	71.806	ENSMMUG00000012269	REXO2	96	71.806	Macaca_mulatta
ENSATEG00000015385	smfn	81	71.806	ENSMNEG00000033379	REXO2	96	71.806	Macaca_nemestrina
ENSATEG00000015385	smfn	81	71.806	ENSMLEG00000036571	REXO2	96	71.806	Mandrillus_leucophaeus
ENSATEG00000015385	smfn	98	78.388	ENSMAMG00000021209	smfn	98	78.388	Mastacembelus_armatus
ENSATEG00000015385	smfn	97	71.324	ENSMZEG00005023224	-	95	71.324	Maylandia_zebra
ENSATEG00000015385	smfn	97	71.324	ENSMZEG00005020730	REXO2	95	71.324	Maylandia_zebra
ENSATEG00000015385	smfn	57	76.398	ENSMGAG00000003026	REXO2	99	76.398	Meleagris_gallopavo
ENSATEG00000015385	smfn	81	73.568	ENSMAUG00000014576	Rexo2	96	73.568	Mesocricetus_auratus
ENSATEG00000015385	smfn	72	80.100	ENSMICG00000010094	REXO2	85	80.100	Microcebus_murinus
ENSATEG00000015385	smfn	72	80.597	ENSMOCG00000009016	Rexo2	85	80.597	Microtus_ochrogaster
ENSATEG00000015385	smfn	87	73.967	ENSMMOG00000006430	smfn	89	73.967	Mola_mola
ENSATEG00000015385	smfn	81	73.451	ENSMODG00000013913	REXO2	95	73.451	Monodelphis_domestica
ENSATEG00000015385	smfn	97	71.326	ENSMALG00000018130	smfn	80	71.326	Monopterus_albus
ENSATEG00000015385	smfn	81	73.009	MGP_CAROLIEiJ_G0032166	Rexo2	95	73.009	Mus_caroli
ENSATEG00000015385	smfn	81	72.566	ENSMUSG00000032026	Rexo2	95	72.566	Mus_musculus
ENSATEG00000015385	smfn	81	72.566	MGP_PahariEiJ_G0015034	Rexo2	95	72.566	Mus_pahari
ENSATEG00000015385	smfn	81	72.566	MGP_SPRETEiJ_G0033305	Rexo2	95	72.566	Mus_spretus
ENSATEG00000015385	smfn	72	79.602	ENSMPUG00000003947	REXO2	85	79.602	Mustela_putorius_furo
ENSATEG00000015385	smfn	77	75.701	ENSMLUG00000009030	REXO2	90	75.701	Myotis_lucifugus
ENSATEG00000015385	smfn	72	79.602	ENSNGAG00000008819	Rexo2	98	79.602	Nannospalax_galili
ENSATEG00000015385	smfn	67	86.022	ENSNBRG00000006529	smfn	98	86.022	Neolamprologus_brichardi
ENSATEG00000015385	smfn	50	57.857	ENSNBRG00000015319	-	89	57.857	Neolamprologus_brichardi
ENSATEG00000015385	smfn	81	71.806	ENSNLEG00000029745	REXO2	96	71.806	Nomascus_leucogenys
ENSATEG00000015385	smfn	72	80.100	ENSMEUG00000011558	REXO2	92	80.100	Notamacropus_eugenii
ENSATEG00000015385	smfn	67	81.183	ENSODEG00000009750	-	99	81.183	Octodon_degus
ENSATEG00000015385	smfn	64	64.246	ENSODEG00000016046	-	89	64.246	Octodon_degus
ENSATEG00000015385	smfn	80	81.696	ENSONIG00000001954	smfn	94	81.696	Oreochromis_niloticus
ENSATEG00000015385	smfn	72	79.104	ENSOANG00000001754	REXO2	84	79.104	Ornithorhynchus_anatinus
ENSATEG00000015385	smfn	72	80.100	ENSOCUG00000004274	REXO2	91	73.128	Oryctolagus_cuniculus
ENSATEG00000015385	smfn	97	67.626	ENSORLG00000005119	smfn	90	67.626	Oryzias_latipes
ENSATEG00000015385	smfn	97	67.626	ENSORLG00020010121	smfn	90	67.626	Oryzias_latipes_hni
ENSATEG00000015385	smfn	97	68.100	ENSORLG00015015699	smfn	90	63.087	Oryzias_latipes_hsok
ENSATEG00000015385	smfn	97	65.568	ENSOMEG00000016878	REXO2	99	65.568	Oryzias_melastigma
ENSATEG00000015385	smfn	51	77.465	ENSOMEG00000008940	-	99	77.465	Oryzias_melastigma
ENSATEG00000015385	smfn	72	80.100	ENSOGAG00000016860	REXO2	85	80.100	Otolemur_garnettii
ENSATEG00000015385	smfn	71	79.899	ENSOARG00000001040	REXO2	94	79.602	Ovis_aries
ENSATEG00000015385	smfn	81	71.806	ENSPPAG00000039849	REXO2	96	71.806	Pan_paniscus
ENSATEG00000015385	smfn	81	72.247	ENSPPRG00000007255	REXO2	96	72.247	Panthera_pardus
ENSATEG00000015385	smfn	67	80.645	ENSPTIG00000015578	REXO2	99	80.645	Panthera_tigris_altaica
ENSATEG00000015385	smfn	81	71.806	ENSPTRG00000004306	REXO2	96	71.806	Pan_troglodytes
ENSATEG00000015385	smfn	81	71.806	ENSPANG00000010675	REXO2	96	71.806	Papio_anubis
ENSATEG00000015385	smfn	77	75.926	ENSPKIG00000000911	smfn	77	85.811	Paramormyrops_kingsleyae
ENSATEG00000015385	smfn	71	79.293	ENSPSIG00000005151	REXO2	79	72.368	Pelodiscus_sinensis
ENSATEG00000015385	smfn	67	82.796	ENSPMGG00000007442	smfn	99	82.796	Periophthalmus_magnuspinnatus
ENSATEG00000015385	smfn	81	60.352	ENSPEMG00000001421	Rexo2	95	60.352	Peromyscus_maniculatus_bairdii
ENSATEG00000015385	smfn	78	75.342	ENSPCIG00000011227	REXO2	66	68.675	Phascolarctos_cinereus
ENSATEG00000015385	smfn	97	69.203	ENSPFOG00000017861	smfn	99	85.075	Poecilia_formosa
ENSATEG00000015385	smfn	84	66.807	ENSPLAG00000007327	REXO2	92	66.807	Poecilia_latipinna
ENSATEG00000015385	smfn	97	68.478	ENSPMEG00000017343	smfn	99	68.478	Poecilia_mexicana
ENSATEG00000015385	smfn	97	67.754	ENSPREG00000016438	smfn	99	67.754	Poecilia_reticulata
ENSATEG00000015385	smfn	81	71.806	ENSPPYG00000003895	REXO2	96	71.806	Pongo_abelii
ENSATEG00000015385	smfn	80	72.889	ENSPCAG00000005237	REXO2	95	72.889	Procavia_capensis
ENSATEG00000015385	smfn	65	74.595	ENSPCOG00000027639	REXO2	95	74.595	Propithecus_coquereli
ENSATEG00000015385	smfn	81	61.572	ENSPVAG00000005295	REXO2	96	61.572	Pteropus_vampyrus
ENSATEG00000015385	smfn	97	70.956	ENSPNYG00000018401	smfn	95	70.956	Pundamilia_nyererei
ENSATEG00000015385	smfn	69	84.375	ENSPNAG00000005290	smfn	96	67.037	Pygocentrus_nattereri
ENSATEG00000015385	smfn	81	72.566	ENSRNOG00000018939	Rexo2	95	72.566	Rattus_norvegicus
ENSATEG00000015385	smfn	81	71.806	ENSRBIG00000037809	REXO2	96	71.806	Rhinopithecus_bieti
ENSATEG00000015385	smfn	81	71.806	ENSRROG00000038928	REXO2	96	71.806	Rhinopithecus_roxellana
ENSATEG00000015385	smfn	77	39.189	YLR059C	REX2	86	38.655	Saccharomyces_cerevisiae
ENSATEG00000015385	smfn	81	72.687	ENSSBOG00000028651	REXO2	96	72.687	Saimiri_boliviensis_boliviensis
ENSATEG00000015385	smfn	81	73.451	ENSSHAG00000008008	REXO2	96	73.451	Sarcophilus_harrisii
ENSATEG00000015385	smfn	66	81.622	ENSSFOG00015022414	smfn	98	81.622	Scleropages_formosus
ENSATEG00000015385	smfn	97	72.527	ENSSMAG00000003168	smfn	99	72.527	Scophthalmus_maximus
ENSATEG00000015385	smfn	98	78.571	ENSSDUG00000015624	smfn	98	78.571	Seriola_dumerili
ENSATEG00000015385	smfn	98	78.214	ENSSLDG00000014005	smfn	98	78.214	Seriola_lalandi_dorsalis
ENSATEG00000015385	smfn	57	72.785	ENSSPUG00000006005	REXO2	85	72.785	Sphenodon_punctatus
ENSATEG00000015385	smfn	66	90.270	ENSSPAG00000001530	smfn	99	90.270	Stegastes_partitus
ENSATEG00000015385	smfn	81	72.247	ENSSSCG00000015056	REXO2	96	72.247	Sus_scrofa
ENSATEG00000015385	smfn	71	78.173	ENSTGUG00000000121	REXO2	97	70.485	Taeniopygia_guttata
ENSATEG00000015385	smfn	77	77.578	ENSTRUG00000021529	smfn	82	78.027	Takifugu_rubripes
ENSATEG00000015385	smfn	68	84.211	ENSTNIG00000008588	smfn	93	76.233	Tetraodon_nigroviridis
ENSATEG00000015385	smfn	81	72.687	ENSTBEG00000017040	REXO2	96	72.687	Tupaia_belangeri
ENSATEG00000015385	smfn	71	79.899	ENSTTRG00000014928	REXO2	84	79.899	Tursiops_truncatus
ENSATEG00000015385	smfn	81	67.544	ENSUAMG00000019096	REXO2	96	72.727	Ursus_americanus
ENSATEG00000015385	smfn	81	72.247	ENSUMAG00000003770	REXO2	96	72.247	Ursus_maritimus
ENSATEG00000015385	smfn	67	62.903	ENSVPAG00000006301	REXO2	99	62.903	Vicugna_pacos
ENSATEG00000015385	smfn	73	78.922	ENSVVUG00000025223	REXO2	85	79.602	Vulpes_vulpes
ENSATEG00000015385	smfn	72	79.208	ENSXETG00000012648	rexo2	83	78.818	Xenopus_tropicalis
ENSATEG00000015385	smfn	67	84.409	ENSXCOG00000018838	smfn	95	84.409	Xiphophorus_couchianus
ENSATEG00000015385	smfn	76	80.282	ENSXMAG00000021125	smfn	67	80.282	Xiphophorus_maculatus