EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000016004 (Gene tree)
Gene ID: 113153894
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 21959 bases
Position: chrOOHO01000017.1:35012391-35034349
Accession: 113153894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000023185	PUF	PF00806.19	1.6e-70	1	8
ENSATEP00000023185	PUF	PF00806.19	1.6e-70	2	8
ENSATEP00000023185	PUF	PF00806.19	1.6e-70	3	8
ENSATEP00000023185	PUF	PF00806.19	1.6e-70	4	8
ENSATEP00000023185	PUF	PF00806.19	1.6e-70	5	8
ENSATEP00000023185	PUF	PF00806.19	1.6e-70	6	8
ENSATEP00000023185	PUF	PF00806.19	1.6e-70	7	8
ENSATEP00000023185	PUF	PF00806.19	1.6e-70	8	8
ENSATEP00000023149	PUF	PF00806.19	3.2e-69	1	8
ENSATEP00000023149	PUF	PF00806.19	3.2e-69	2	8
ENSATEP00000023149	PUF	PF00806.19	3.2e-69	3	8
ENSATEP00000023149	PUF	PF00806.19	3.2e-69	4	8
ENSATEP00000023149	PUF	PF00806.19	3.2e-69	5	8
ENSATEP00000023149	PUF	PF00806.19	3.2e-69	6	8
ENSATEP00000023149	PUF	PF00806.19	3.2e-69	7	8
ENSATEP00000023149	PUF	PF00806.19	3.2e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000023522	-	5343	XM_026347783	ENSATEP00000023149	1163 (aa)	XP_026203566	UPI000E45DC75
ENSATET00000023558	-	2940	-	ENSATEP00000023185	979 (aa)	-	-

Gene Model

Click here to download ENSATEG00000016004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000016004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000016004	pum1	99	84.709	ENSATEG00000015030	pum2	84	84.096

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000016004	pum1	100	91.525	ENSG00000134644	PUM1	99	91.566	Homo_sapiens
ENSATEG00000016004	pum1	100	99.518	ENSAPOG00000021632	pum1	100	99.518	Acanthochromis_polyacanthus
ENSATEG00000016004	pum1	100	91.084	ENSAMEG00000017656	PUM1	87	91.566	Ailuropoda_melanoleuca
ENSATEG00000016004	pum1	100	98.108	ENSACIG00000021013	pum1	100	98.108	Amphilophus_citrinellus
ENSATEG00000016004	pum1	100	99.518	ENSAOCG00000003944	pum1	100	99.518	Amphiprion_ocellaris
ENSATEG00000016004	pum1	100	99.518	ENSAPEG00000014550	pum1	100	99.518	Amphiprion_percula
ENSATEG00000016004	pum1	100	91.566	ENSAPLG00000009351	PUM1	90	91.566	Anas_platyrhynchos
ENSATEG00000016004	pum1	100	76.490	ENSACAG00000000682	PUM1	88	88.506	Anolis_carolinensis
ENSATEG00000016004	pum1	100	91.283	ENSANAG00000027865	PUM1	100	91.325	Aotus_nancymaae
ENSATEG00000016004	pum1	92	98.310	ENSACLG00000019354	pum1	100	98.310	Astatotilapia_calliptera
ENSATEG00000016004	pum1	100	82.034	ENSAMXG00000020607	pum1	96	82.119	Astyanax_mexicanus
ENSATEG00000016004	pum1	100	91.525	ENSBTAG00000018979	PUM1	100	92.048	Bos_taurus
ENSATEG00000016004	pum1	100	91.084	ENSCJAG00000006035	PUM1	100	81.312	Callithrix_jacchus
ENSATEG00000016004	pum1	100	91.084	ENSCAFG00020024616	PUM1	100	91.566	Canis_lupus_dingo
ENSATEG00000016004	pum1	100	91.525	ENSCHIG00000012952	PUM1	100	91.566	Capra_hircus
ENSATEG00000016004	pum1	100	91.084	ENSTSYG00000008868	PUM1	100	82.410	Carlito_syrichta
ENSATEG00000016004	pum1	100	90.843	ENSCPOG00000031613	PUM1	100	81.064	Cavia_porcellus
ENSATEG00000016004	pum1	94	91.566	ENSCATG00000017991	PUM1	93	92.048	Cercocebus_atys
ENSATEG00000016004	pum1	100	90.843	ENSCLAG00000007662	PUM1	100	81.930	Chinchilla_lanigera
ENSATEG00000016004	pum1	100	91.084	ENSCSAG00000001028	PUM1	90	88.506	Chlorocebus_sabaeus
ENSATEG00000016004	pum1	99	68.900	ENSCHOG00000010245	PUM1	93	65.700	Choloepus_hoffmanni
ENSATEG00000016004	pum1	100	91.807	ENSCPBG00000009288	PUM1	100	91.807	Chrysemys_picta_bellii
ENSATEG00000016004	pum1	100	91.084	ENSCANG00000042606	PUM1	100	91.566	Colobus_angolensis_palliatus
ENSATEG00000016004	pum1	100	90.799	ENSCGRG00001024949	Pum1	100	82.942	Cricetulus_griseus_chok1gshd
ENSATEG00000016004	pum1	100	90.799	ENSCGRG00000014197	Pum1	100	82.942	Cricetulus_griseus_crigri
ENSATEG00000016004	pum1	100	100.000	ENSCSEG00000015981	pum1	100	96.813	Cynoglossus_semilaevis
ENSATEG00000016004	pum1	100	98.072	ENSCVAG00000007043	pum1	100	97.420	Cyprinodon_variegatus
ENSATEG00000016004	pum1	100	94.699	ENSDARG00000099256	pum1	100	81.356	Danio_rerio
ENSATEG00000016004	pum1	100	90.602	ENSDNOG00000010939	PUM1	90	88.046	Dasypus_novemcinctus
ENSATEG00000016004	pum1	100	78.821	ENSDORG00000001875	Pum1	100	76.877	Dipodomys_ordii
ENSATEG00000016004	pum1	98	77.957	ENSETEG00000004355	PUM1	87	78.495	Echinops_telfairi
ENSATEG00000016004	pum1	100	90.602	ENSEASG00005010813	PUM1	90	91.084	Equus_asinus_asinus
ENSATEG00000016004	pum1	100	90.602	ENSECAG00000021369	PUM1	90	91.084	Equus_caballus
ENSATEG00000016004	pum1	76	90.843	ENSEEUG00000003871	PUM1	74	91.111	Erinaceus_europaeus
ENSATEG00000016004	pum1	100	96.386	ENSELUG00000002409	pum1	100	92.373	Esox_lucius
ENSATEG00000016004	pum1	100	91.084	ENSFCAG00000010374	PUM1	90	91.566	Felis_catus
ENSATEG00000016004	pum1	100	91.566	ENSFALG00000001214	PUM1	87	91.566	Ficedula_albicollis
ENSATEG00000016004	pum1	100	90.777	ENSFDAG00000011319	PUM1	100	80.941	Fukomys_damarensis
ENSATEG00000016004	pum1	100	90.700	ENSGMOG00000010491	pum1	100	90.785	Gadus_morhua
ENSATEG00000016004	pum1	100	91.566	ENSGALG00000042598	PUM1	99	90.141	Gallus_gallus
ENSATEG00000016004	pum1	100	97.592	ENSGAFG00000015617	pum1	100	98.072	Gambusia_affinis
ENSATEG00000016004	pum1	99	96.983	ENSGACG00000005717	pum1	100	96.983	Gasterosteus_aculeatus
ENSATEG00000016004	pum1	100	91.807	ENSGAGG00000001290	PUM1	99	91.807	Gopherus_agassizii
ENSATEG00000016004	pum1	100	91.084	ENSGGOG00000011983	PUM1	100	91.566	Gorilla_gorilla
ENSATEG00000016004	pum1	100	98.538	ENSHBUG00000018718	pum1	100	98.538	Haplochromis_burtoni
ENSATEG00000016004	pum1	100	90.534	ENSHGLG00000013819	Pum1	100	80.941	Heterocephalus_glaber_female
ENSATEG00000016004	pum1	100	90.534	ENSHGLG00100008621	Pum1	100	80.941	Heterocephalus_glaber_male
ENSATEG00000016004	pum1	92	90.525	ENSHCOG00000005149	pum1	100	89.118	Hippocampus_comes
ENSATEG00000016004	pum1	100	80.708	ENSIPUG00000020421	pum1	100	81.045	Ictalurus_punctatus
ENSATEG00000016004	pum1	100	90.843	ENSSTOG00000010757	PUM1	100	81.312	Ictidomys_tridecemlineatus
ENSATEG00000016004	pum1	100	91.084	ENSJJAG00000000530	Pum1	90	91.566	Jaculus_jaculus
ENSATEG00000016004	pum1	100	98.554	ENSKMAG00000003481	pum1	100	98.194	Kryptolebias_marmoratus
ENSATEG00000016004	pum1	100	97.678	ENSLBEG00000002527	pum1	100	97.678	Labrus_bergylta
ENSATEG00000016004	pum1	100	83.971	ENSLACG00000017188	PUM1	99	73.096	Latimeria_chalumnae
ENSATEG00000016004	pum1	100	94.217	ENSLOCG00000005210	pum1	99	81.083	Lepisosteus_oculatus
ENSATEG00000016004	pum1	100	92.530	ENSLAFG00000003178	PUM1	90	89.425	Loxodonta_africana
ENSATEG00000016004	pum1	100	91.084	ENSMFAG00000010291	PUM1	100	92.048	Macaca_fascicularis
ENSATEG00000016004	pum1	100	91.084	ENSMMUG00000013520	PUM1	100	91.566	Macaca_mulatta
ENSATEG00000016004	pum1	100	91.084	ENSMNEG00000034639	PUM1	100	91.566	Macaca_nemestrina
ENSATEG00000016004	pum1	100	91.084	ENSMLEG00000038743	PUM1	100	91.566	Mandrillus_leucophaeus
ENSATEG00000016004	pum1	100	98.795	ENSMAMG00000011606	pum1	100	98.624	Mastacembelus_armatus
ENSATEG00000016004	pum1	100	98.538	ENSMZEG00005005834	pum1	100	98.538	Maylandia_zebra
ENSATEG00000016004	pum1	100	91.566	ENSMGAG00000000724	PUM1	90	91.566	Meleagris_gallopavo
ENSATEG00000016004	pum1	100	90.843	ENSMAUG00000022090	Pum1	100	83.292	Mesocricetus_auratus
ENSATEG00000016004	pum1	100	90.557	ENSMICG00000012213	-	100	88.675	Microcebus_murinus
ENSATEG00000016004	pum1	100	90.843	ENSMICG00000007713	-	100	91.325	Microcebus_murinus
ENSATEG00000016004	pum1	100	90.843	ENSMOCG00000015463	Pum1	100	83.066	Microtus_ochrogaster
ENSATEG00000016004	pum1	100	92.041	ENSMMOG00000019817	pum1	100	92.041	Mola_mola
ENSATEG00000016004	pum1	100	91.325	ENSMODG00000017067	PUM1	85	91.084	Monodelphis_domestica
ENSATEG00000016004	pum1	100	98.065	ENSMALG00000016399	pum1	100	99.518	Monopterus_albus
ENSATEG00000016004	pum1	100	91.525	MGP_CAROLIEiJ_G0026549	Pum1	90	92.010	Mus_caroli
ENSATEG00000016004	pum1	100	91.283	ENSMUSG00000028580	Pum1	90	91.768	Mus_musculus
ENSATEG00000016004	pum1	100	91.283	MGP_PahariEiJ_G0028881	Pum1	90	91.768	Mus_pahari
ENSATEG00000016004	pum1	100	91.283	MGP_SPRETEiJ_G0027529	Pum1	90	91.768	Mus_spretus
ENSATEG00000016004	pum1	100	91.566	ENSMPUG00000015454	PUM1	90	91.566	Mustela_putorius_furo
ENSATEG00000016004	pum1	100	91.525	ENSMLUG00000006490	PUM1	90	88.915	Myotis_lucifugus
ENSATEG00000016004	pum1	100	90.843	ENSNGAG00000002378	Pum1	100	81.312	Nannospalax_galili
ENSATEG00000016004	pum1	79	98.750	ENSNBRG00000010689	pum1	100	98.750	Neolamprologus_brichardi
ENSATEG00000016004	pum1	100	87.952	ENSNLEG00000001151	PUM1	100	88.434	Nomascus_leucogenys
ENSATEG00000016004	pum1	73	78.621	ENSMEUG00000000976	-	67	80.418	Notamacropus_eugenii
ENSATEG00000016004	pum1	81	91.589	ENSOPRG00000001776	PUM1	70	91.589	Ochotona_princeps
ENSATEG00000016004	pum1	100	79.441	ENSODEG00000003465	PUM1	100	81.064	Octodon_degus
ENSATEG00000016004	pum1	100	99.277	ENSONIG00000002290	pum1	100	99.054	Oreochromis_niloticus
ENSATEG00000016004	pum1	92	64.191	ENSOANG00000004902	-	100	61.336	Ornithorhynchus_anatinus
ENSATEG00000016004	pum1	99	91.241	ENSOCUG00000008641	PUM1	89	88.631	Oryctolagus_cuniculus
ENSATEG00000016004	pum1	100	97.515	ENSORLG00000011482	pum1	100	97.515	Oryzias_latipes
ENSATEG00000016004	pum1	100	98.072	ENSORLG00020019461	pum1	100	97.515	Oryzias_latipes_hni
ENSATEG00000016004	pum1	100	98.072	ENSORLG00015011375	pum1	100	97.515	Oryzias_latipes_hsok
ENSATEG00000016004	pum1	100	94.812	ENSOMEG00000009312	pum1	100	98.554	Oryzias_melastigma
ENSATEG00000016004	pum1	100	83.453	ENSOGAG00000011063	PUM1	100	72.033	Otolemur_garnettii
ENSATEG00000016004	pum1	100	91.084	ENSOARG00000001899	PUM1	100	91.566	Ovis_aries
ENSATEG00000016004	pum1	100	91.084	ENSPPAG00000044003	PUM1	100	91.566	Pan_paniscus
ENSATEG00000016004	pum1	100	91.084	ENSPPRG00000001370	PUM1	100	81.436	Panthera_pardus
ENSATEG00000016004	pum1	100	91.084	ENSPTIG00000010798	PUM1	100	81.683	Panthera_tigris_altaica
ENSATEG00000016004	pum1	100	91.084	ENSPTRG00000000453	PUM1	100	91.566	Pan_troglodytes
ENSATEG00000016004	pum1	100	91.084	ENSPANG00000016338	PUM1	100	92.048	Papio_anubis
ENSATEG00000016004	pum1	100	92.530	ENSPKIG00000010578	pum1	100	77.186	Paramormyrops_kingsleyae
ENSATEG00000016004	pum1	100	91.807	ENSPSIG00000014118	PUM1	90	88.736	Pelodiscus_sinensis
ENSATEG00000016004	pum1	79	99.153	ENSPMGG00000005836	pum1	100	99.153	Periophthalmus_magnuspinnatus
ENSATEG00000016004	pum1	100	90.843	ENSPEMG00000010009	Pum1	100	83.292	Peromyscus_maniculatus_bairdii
ENSATEG00000016004	pum1	100	91.325	ENSPCIG00000014151	PUM1	100	91.566	Phascolarctos_cinereus
ENSATEG00000016004	pum1	100	98.072	ENSPFOG00000007289	pum1	99	97.685	Poecilia_formosa
ENSATEG00000016004	pum1	100	98.072	ENSPLAG00000007256	pum1	100	97.249	Poecilia_latipinna
ENSATEG00000016004	pum1	100	98.072	ENSPMEG00000019543	pum1	99	96.825	Poecilia_mexicana
ENSATEG00000016004	pum1	100	98.072	ENSPREG00000005195	pum1	100	98.305	Poecilia_reticulata
ENSATEG00000016004	pum1	100	91.084	ENSPPYG00000001621	PUM1	90	88.506	Pongo_abelii
ENSATEG00000016004	pum1	81	92.901	ENSPCAG00000001979	PUM1	73	93.519	Procavia_capensis
ENSATEG00000016004	pum1	100	90.843	ENSPCOG00000004398	PUM1	100	91.325	Propithecus_coquereli
ENSATEG00000016004	pum1	100	85.301	ENSPVAG00000005207	PUM1	87	85.783	Pteropus_vampyrus
ENSATEG00000016004	pum1	100	98.624	ENSPNYG00000009518	pum1	100	98.624	Pundamilia_nyererei
ENSATEG00000016004	pum1	100	82.373	ENSPNAG00000026728	pum1	100	82.458	Pygocentrus_nattereri
ENSATEG00000016004	pum1	100	83.087	ENSRNOG00000011709	Pum1	90	91.768	Rattus_norvegicus
ENSATEG00000016004	pum1	100	91.084	ENSRBIG00000042521	PUM1	100	92.048	Rhinopithecus_bieti
ENSATEG00000016004	pum1	100	91.525	ENSRROG00000020156	PUM1	100	91.566	Rhinopithecus_roxellana
ENSATEG00000016004	pum1	100	91.084	ENSSBOG00000032037	PUM1	100	91.566	Saimiri_boliviensis_boliviensis
ENSATEG00000016004	pum1	100	91.325	ENSSHAG00000010918	PUM1	85	91.084	Sarcophilus_harrisii
ENSATEG00000016004	pum1	100	97.248	ENSSMAG00000010918	pum1	100	99.518	Scophthalmus_maximus
ENSATEG00000016004	pum1	100	99.518	ENSSDUG00000009021	pum1	100	99.226	Seriola_dumerili
ENSATEG00000016004	pum1	94	99.153	ENSSLDG00000009667	pum1	100	99.153	Seriola_lalandi_dorsalis
ENSATEG00000016004	pum1	93	91.084	ENSSARG00000003055	PUM1	81	91.566	Sorex_araneus
ENSATEG00000016004	pum1	100	91.566	ENSSPUG00000006267	PUM1	90	91.566	Sphenodon_punctatus
ENSATEG00000016004	pum1	100	99.518	ENSSPAG00000016636	pum1	100	99.518	Stegastes_partitus
ENSATEG00000016004	pum1	100	91.525	ENSSSCG00000003591	PUM1	100	92.048	Sus_scrofa
ENSATEG00000016004	pum1	100	97.678	ENSTRUG00000013121	pum1	100	98.625	Takifugu_rubripes
ENSATEG00000016004	pum1	100	96.667	ENSTNIG00000016983	pum1	99	96.667	Tetraodon_nigroviridis
ENSATEG00000016004	pum1	87	90.244	ENSTBEG00000013810	PUM1	89	90.244	Tupaia_belangeri
ENSATEG00000016004	pum1	100	90.602	ENSTTRG00000007436	PUM1	87	91.084	Tursiops_truncatus
ENSATEG00000016004	pum1	98	90.615	ENSUAMG00000018262	-	100	72.645	Ursus_americanus
ENSATEG00000016004	pum1	100	79.100	ENSUMAG00000009211	PUM1	89	76.754	Ursus_maritimus
ENSATEG00000016004	pum1	91	91.084	ENSVPAG00000005902	PUM1	92	81.807	Vicugna_pacos
ENSATEG00000016004	pum1	100	91.525	ENSVVUG00000014631	PUM1	90	91.566	Vulpes_vulpes
ENSATEG00000016004	pum1	100	72.998	ENSXETG00000012904	pum1	99	71.795	Xenopus_tropicalis
ENSATEG00000016004	pum1	100	97.420	ENSXMAG00000002945	pum1	100	97.420	Xiphophorus_maculatus