EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000016606 (Gene tree)
Gene ID: 113152737
Gene Symbol: -
Alias: HUPF1|KIAA0221|NORF1|RENT1|pNORF1|smg-2
Full Name: regulator of nonsense transcripts 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 12178 bases
Position: chrOOHO01000016.1:17757258-17769435
Accession: 113152737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000023978	UPF1_Zn_bind	PF09416.10	1.1e-74	1	1
ENSATEP00000023978	ResIII	PF04851.15	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000024363	-	3309	-	ENSATEP00000023978	1101 (aa)	XP_026201941	UPI000E45FD67

Gene Model

Click here to download ENSATEG00000016606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000016606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000016606	-	100	91.548	ENSATEG00000017867	upf1	100	92.576

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000016606	-	100	92.596	ENSG00000005007	UPF1	100	92.596	Homo_sapiens
ENSATEG00000016606	-	100	99.546	ENSAPOG00000010916	-	100	99.546	Acanthochromis_polyacanthus
ENSATEG00000016606	-	100	93.309	ENSAPOG00000023773	upf1	100	93.309	Acanthochromis_polyacanthus
ENSATEG00000016606	-	100	92.103	ENSAMEG00000011474	UPF1	100	92.103	Ailuropoda_melanoleuca
ENSATEG00000016606	-	100	93.370	ENSACIG00000019949	upf1	100	93.370	Amphilophus_citrinellus
ENSATEG00000016606	-	93	98.345	ENSACIG00000010985	-	100	98.345	Amphilophus_citrinellus
ENSATEG00000016606	-	100	92.825	ENSAOCG00000018519	upf1	100	93.280	Amphiprion_ocellaris
ENSATEG00000016606	-	100	99.364	ENSAOCG00000006352	-	100	99.364	Amphiprion_ocellaris
ENSATEG00000016606	-	100	99.273	ENSAPEG00000006292	-	100	99.273	Amphiprion_percula
ENSATEG00000016606	-	100	92.825	ENSAPEG00000016344	upf1	100	93.280	Amphiprion_percula
ENSATEG00000016606	-	95	94.223	ENSAPLG00000009175	UPF1	100	94.129	Anas_platyrhynchos
ENSATEG00000016606	-	95	92.593	ENSANAG00000024107	UPF1	95	92.498	Aotus_nancymaae
ENSATEG00000016606	-	100	93.279	ENSACLG00000007181	upf1	100	93.279	Astatotilapia_calliptera
ENSATEG00000016606	-	100	98.730	ENSACLG00000022630	-	100	98.730	Astatotilapia_calliptera
ENSATEG00000016606	-	100	94.923	ENSAMXG00000042187	upf1	100	95.104	Astyanax_mexicanus
ENSATEG00000016606	-	100	92.117	ENSBTAG00000020922	UPF1	100	92.117	Bos_taurus
ENSATEG00000016606	-	90	51.457	WBGene00004880	smg-2	99	49.032	Caenorhabditis_elegans
ENSATEG00000016606	-	100	91.696	ENSCJAG00000019627	UPF1	100	91.696	Callithrix_jacchus
ENSATEG00000016606	-	100	91.873	ENSCAFG00000014578	UPF1	100	91.873	Canis_familiaris
ENSATEG00000016606	-	100	92.774	ENSCAFG00020012347	UPF1	100	92.774	Canis_lupus_dingo
ENSATEG00000016606	-	100	93.023	ENSCHIG00000011018	UPF1	100	93.023	Capra_hircus
ENSATEG00000016606	-	95	93.732	ENSTSYG00000008877	UPF1	98	93.637	Carlito_syrichta
ENSATEG00000016606	-	96	93.052	ENSCAPG00000005758	UPF1	95	93.637	Cavia_aperea
ENSATEG00000016606	-	100	92.902	ENSCPOG00000025463	UPF1	100	92.812	Cavia_porcellus
ENSATEG00000016606	-	100	92.596	ENSCCAG00000032175	UPF1	100	92.596	Cebus_capucinus
ENSATEG00000016606	-	94	94.179	ENSCATG00000040306	UPF1	97	94.084	Cercocebus_atys
ENSATEG00000016606	-	95	93.922	ENSCLAG00000004037	UPF1	99	93.827	Chinchilla_lanigera
ENSATEG00000016606	-	100	92.596	ENSCSAG00000005276	UPF1	100	92.596	Chlorocebus_sabaeus
ENSATEG00000016606	-	100	92.915	ENSCPBG00000012513	UPF1	100	92.825	Chrysemys_picta_bellii
ENSATEG00000016606	-	77	79.508	ENSCING00000021399	-	99	78.546	Ciona_intestinalis
ENSATEG00000016606	-	99	73.136	ENSCSAVG00000006533	-	99	73.405	Ciona_savignyi
ENSATEG00000016606	-	95	93.922	ENSCANG00000029819	UPF1	97	93.827	Colobus_angolensis_palliatus
ENSATEG00000016606	-	100	92.563	ENSCGRG00001021067	Upf1	100	92.563	Cricetulus_griseus_chok1gshd
ENSATEG00000016606	-	95	93.447	ENSCGRG00000013480	Upf1	98	93.352	Cricetulus_griseus_crigri
ENSATEG00000016606	-	100	88.123	ENSCSEG00000017239	upf1	100	87.884	Cynoglossus_semilaevis
ENSATEG00000016606	-	100	98.456	ENSCSEG00000016159	-	100	98.456	Cynoglossus_semilaevis
ENSATEG00000016606	-	100	98.002	ENSCVAG00000010561	upf1	100	98.002	Cyprinodon_variegatus
ENSATEG00000016606	-	100	94.288	ENSDARG00000016302	upf1	100	94.560	Danio_rerio
ENSATEG00000016606	-	95	91.453	ENSDORG00000009984	Upf1	95	91.358	Dipodomys_ordii
ENSATEG00000016606	-	86	71.429	FBgn0030354	Upf1	81	71.058	Drosophila_melanogaster
ENSATEG00000016606	-	54	86.446	ENSEBUG00000010069	upf1	96	86.777	Eptatretus_burgeri
ENSATEG00000016606	-	100	92.934	ENSEASG00005006549	UPF1	100	92.934	Equus_asinus_asinus
ENSATEG00000016606	-	100	92.934	ENSECAG00000010639	UPF1	100	92.934	Equus_caballus
ENSATEG00000016606	-	100	95.401	ENSELUG00000012916	-	100	95.401	Esox_lucius
ENSATEG00000016606	-	100	92.599	ENSELUG00000020917	upf1	100	92.058	Esox_lucius
ENSATEG00000016606	-	100	91.784	ENSFCAG00000009757	UPF1	100	91.784	Felis_catus
ENSATEG00000016606	-	95	94.757	ENSFALG00000009312	UPF1	96	94.662	Ficedula_albicollis
ENSATEG00000016606	-	95	93.827	ENSFDAG00000014816	UPF1	99	93.732	Fukomys_damarensis
ENSATEG00000016606	-	86	98.548	ENSFHEG00000016276	-	96	98.548	Fundulus_heteroclitus
ENSATEG00000016606	-	100	89.615	ENSFHEG00000006428	upf1	100	89.177	Fundulus_heteroclitus
ENSATEG00000016606	-	100	94.519	ENSGMOG00000007541	upf1	100	95.058	Gadus_morhua
ENSATEG00000016606	-	100	92.851	ENSGALG00000003220	UPF1	100	92.761	Gallus_gallus
ENSATEG00000016606	-	100	98.093	ENSGAFG00000004831	upf1	100	98.093	Gambusia_affinis
ENSATEG00000016606	-	64	92.697	ENSGAFG00000015443	-	88	92.190	Gambusia_affinis
ENSATEG00000016606	-	100	93.423	ENSGAGG00000022217	UPF1	100	93.423	Gopherus_agassizii
ENSATEG00000016606	-	95	94.914	ENSGGOG00000002608	UPF1	99	94.818	Gorilla_gorilla
ENSATEG00000016606	-	90	86.207	ENSHBUG00000014694	upf1	100	86.207	Haplochromis_burtoni
ENSATEG00000016606	-	86	100.000	ENSHBUG00000008939	upf1	95	100.000	Haplochromis_burtoni
ENSATEG00000016606	-	100	91.431	ENSHGLG00000010900	UPF1	100	91.431	Heterocephalus_glaber_female
ENSATEG00000016606	-	95	92.118	ENSHGLG00100005904	UPF1	96	92.023	Heterocephalus_glaber_male
ENSATEG00000016606	-	100	98.276	ENSHCOG00000008918	upf1	100	98.276	Hippocampus_comes
ENSATEG00000016606	-	100	94.923	ENSIPUG00000005108	UPF1	100	95.104	Ictalurus_punctatus
ENSATEG00000016606	-	100	92.596	ENSSTOG00000009196	UPF1	100	92.596	Ictidomys_tridecemlineatus
ENSATEG00000016606	-	100	91.467	ENSJJAG00000023151	Upf1	100	91.467	Jaculus_jaculus
ENSATEG00000016606	-	100	98.728	ENSKMAG00000004962	upf1	100	98.728	Kryptolebias_marmoratus
ENSATEG00000016606	-	100	98.548	ENSLBEG00000027848	-	100	98.548	Labrus_bergylta
ENSATEG00000016606	-	100	91.577	ENSLBEG00000014862	upf1	100	92.294	Labrus_bergylta
ENSATEG00000016606	-	63	94.699	ENSLACG00000008482	UPF1	100	94.699	Latimeria_chalumnae
ENSATEG00000016606	-	100	95.913	ENSLOCG00000002072	upf1	100	95.913	Lepisosteus_oculatus
ENSATEG00000016606	-	100	91.416	ENSLAFG00000014963	UPF1	100	91.416	Loxodonta_africana
ENSATEG00000016606	-	100	92.349	ENSMFAG00000037748	UPF1	100	92.349	Macaca_fascicularis
ENSATEG00000016606	-	100	92.103	ENSMMUG00000023286	UPF1	100	92.103	Macaca_mulatta
ENSATEG00000016606	-	100	92.349	ENSMNEG00000000046	UPF1	100	92.349	Macaca_nemestrina
ENSATEG00000016606	-	95	93.922	ENSMLEG00000028404	UPF1	99	93.827	Mandrillus_leucophaeus
ENSATEG00000016606	-	100	98.911	ENSMAMG00000006231	-	100	98.911	Mastacembelus_armatus
ENSATEG00000016606	-	100	92.129	ENSMAMG00000006229	upf1	100	92.844	Mastacembelus_armatus
ENSATEG00000016606	-	100	98.730	ENSMZEG00005016386	-	100	98.730	Maylandia_zebra
ENSATEG00000016606	-	100	92.273	ENSMZEG00005003489	upf1	100	92.543	Maylandia_zebra
ENSATEG00000016606	-	95	93.738	ENSMGAG00000004745	UPF1	100	93.643	Meleagris_gallopavo
ENSATEG00000016606	-	95	93.447	ENSMAUG00000011398	Upf1	95	93.352	Mesocricetus_auratus
ENSATEG00000016606	-	100	92.507	ENSMICG00000001659	UPF1	100	92.507	Microcebus_murinus
ENSATEG00000016606	-	100	91.659	ENSMOCG00000005699	Upf1	100	91.748	Microtus_ochrogaster
ENSATEG00000016606	-	100	92.461	ENSMMOG00000007881	upf1	100	92.740	Mola_mola
ENSATEG00000016606	-	95	96.651	ENSMMOG00000007537	-	99	96.651	Mola_mola
ENSATEG00000016606	-	100	91.542	ENSMODG00000003689	UPF1	100	91.630	Monodelphis_domestica
ENSATEG00000016606	-	100	97.376	ENSMALG00000018100	-	100	97.376	Monopterus_albus
ENSATEG00000016606	-	100	92.461	ENSMALG00000000144	upf1	100	92.391	Monopterus_albus
ENSATEG00000016606	-	100	92.473	MGP_CAROLIEiJ_G0031142	Upf1	100	92.473	Mus_caroli
ENSATEG00000016606	-	100	92.473	ENSMUSG00000058301	Upf1	100	92.473	Mus_musculus
ENSATEG00000016606	-	100	92.473	MGP_PahariEiJ_G0021607	Upf1	100	92.473	Mus_pahari
ENSATEG00000016606	-	100	92.473	MGP_SPRETEiJ_G0032260	Upf1	100	92.473	Mus_spretus
ENSATEG00000016606	-	100	92.774	ENSMPUG00000015516	UPF1	100	92.774	Mustela_putorius_furo
ENSATEG00000016606	-	99	92.569	ENSMLUG00000012122	UPF1	99	92.569	Myotis_lucifugus
ENSATEG00000016606	-	100	91.239	ENSNGAG00000024107	Upf1	100	91.239	Nannospalax_galili
ENSATEG00000016606	-	100	95.101	ENSNBRG00000022069	-	100	97.573	Neolamprologus_brichardi
ENSATEG00000016606	-	100	91.462	ENSNBRG00000000670	upf1	100	91.462	Neolamprologus_brichardi
ENSATEG00000016606	-	95	88.129	ENSNLEG00000006062	UPF1	99	88.034	Nomascus_leucogenys
ENSATEG00000016606	-	83	89.062	ENSMEUG00000014146	-	83	88.867	Notamacropus_eugenii
ENSATEG00000016606	-	95	87.812	ENSOPRG00000014018	UPF1	99	87.716	Ochotona_princeps
ENSATEG00000016606	-	100	92.806	ENSODEG00000012426	UPF1	100	92.716	Octodon_degus
ENSATEG00000016606	-	100	92.453	ENSONIG00000010452	upf1	100	92.722	Oreochromis_niloticus
ENSATEG00000016606	-	100	98.820	ENSONIG00000012729	-	100	98.820	Oreochromis_niloticus
ENSATEG00000016606	-	100	91.858	ENSOANG00000004568	UPF1	100	91.681	Ornithorhynchus_anatinus
ENSATEG00000016606	-	100	97.820	ENSORLG00000008453	upf1	100	97.820	Oryzias_latipes
ENSATEG00000016606	-	100	97.731	ENSORLG00020014758	upf1	100	97.731	Oryzias_latipes_hni
ENSATEG00000016606	-	100	97.731	ENSORLG00015010165	upf1	100	97.731	Oryzias_latipes_hsok
ENSATEG00000016606	-	100	98.093	ENSOMEG00000003665	upf1	100	98.093	Oryzias_melastigma
ENSATEG00000016606	-	100	92.685	ENSOGAG00000012866	UPF1	100	92.685	Otolemur_garnettii
ENSATEG00000016606	-	96	91.085	ENSOARG00000010739	UPF1	100	90.993	Ovis_aries
ENSATEG00000016606	-	95	93.922	ENSPPAG00000043884	UPF1	96	93.827	Pan_paniscus
ENSATEG00000016606	-	100	91.784	ENSPPRG00000023470	UPF1	100	91.784	Panthera_pardus
ENSATEG00000016606	-	95	92.912	ENSPTIG00000010159	UPF1	99	92.816	Panthera_tigris_altaica
ENSATEG00000016606	-	100	92.349	ENSPTRG00000010721	UPF1	100	92.349	Pan_troglodytes
ENSATEG00000016606	-	100	92.349	ENSPANG00000008847	UPF1	100	92.349	Papio_anubis
ENSATEG00000016606	-	92	94.970	ENSPKIG00000006069	upf1	95	96.173	Paramormyrops_kingsleyae
ENSATEG00000016606	-	70	93.742	ENSPSIG00000009491	UPF1	100	93.611	Pelodiscus_sinensis
ENSATEG00000016606	-	100	91.403	ENSPMGG00000017327	upf1	100	91.493	Periophthalmus_magnuspinnatus
ENSATEG00000016606	-	100	91.659	ENSPEMG00000001085	Upf1	100	91.659	Peromyscus_maniculatus_bairdii
ENSATEG00000016606	-	100	87.748	ENSPMAG00000001206	upf1	100	87.748	Petromyzon_marinus
ENSATEG00000016606	-	100	92.946	ENSPCIG00000006156	UPF1	100	92.946	Phascolarctos_cinereus
ENSATEG00000016606	-	100	91.269	ENSPLAG00000018155	-	100	90.909	Poecilia_latipinna
ENSATEG00000016606	-	100	98.183	ENSPLAG00000016232	-	100	98.183	Poecilia_latipinna
ENSATEG00000016606	-	100	98.094	ENSPMEG00000016319	-	100	98.094	Poecilia_mexicana
ENSATEG00000016606	-	100	91.840	ENSPMEG00000011443	-	100	91.462	Poecilia_mexicana
ENSATEG00000016606	-	100	97.911	ENSPREG00000011247	-	100	97.911	Poecilia_reticulata
ENSATEG00000016606	-	100	91.644	ENSPREG00000009940	upf1	100	91.195	Poecilia_reticulata
ENSATEG00000016606	-	100	86.837	ENSPPYG00000009752	UPF1	100	86.661	Pongo_abelii
ENSATEG00000016606	-	75	98.653	ENSPCAG00000012962	UPF1	76	98.653	Procavia_capensis
ENSATEG00000016606	-	100	92.274	ENSPCOG00000023813	UPF1	100	92.274	Propithecus_coquereli
ENSATEG00000016606	-	68	100.000	ENSPVAG00000003183	UPF1	69	100.000	Pteropus_vampyrus
ENSATEG00000016606	-	100	92.273	ENSPNYG00000003694	upf1	100	92.543	Pundamilia_nyererei
ENSATEG00000016606	-	100	98.639	ENSPNYG00000016731	-	100	98.639	Pundamilia_nyererei
ENSATEG00000016606	-	100	94.470	ENSPNAG00000025614	upf1	100	94.651	Pygocentrus_nattereri
ENSATEG00000016606	-	100	92.473	ENSRNOG00000020134	Upf1	100	92.473	Rattus_norvegicus
ENSATEG00000016606	-	95	91.548	ENSRBIG00000013894	UPF1	98	94.645	Rhinopithecus_bieti
ENSATEG00000016606	-	95	93.922	ENSRROG00000040935	UPF1	98	94.645	Rhinopithecus_roxellana
ENSATEG00000016606	-	76	55.778	YMR080C	NAM7	87	55.778	Saccharomyces_cerevisiae
ENSATEG00000016606	-	94	94.179	ENSSBOG00000023632	UPF1	96	94.084	Saimiri_boliviensis_boliviensis
ENSATEG00000016606	-	95	93.934	ENSSHAG00000010499	UPF1	100	93.839	Sarcophilus_harrisii
ENSATEG00000016606	-	100	95.735	ENSSFOG00015021095	upf1	100	95.735	Scleropages_formosus
ENSATEG00000016606	-	100	99.093	ENSSMAG00000021018	-	100	99.093	Scophthalmus_maximus
ENSATEG00000016606	-	100	91.129	ENSSMAG00000005055	upf1	100	91.667	Scophthalmus_maximus
ENSATEG00000016606	-	100	92.039	ENSSDUG00000013320	upf1	100	92.755	Seriola_dumerili
ENSATEG00000016606	-	100	99.546	ENSSDUG00000009629	-	100	99.546	Seriola_dumerili
ENSATEG00000016606	-	100	92.870	ENSSLDG00000020868	upf1	100	93.231	Seriola_lalandi_dorsalis
ENSATEG00000016606	-	100	99.546	ENSSLDG00000006878	-	100	99.546	Seriola_lalandi_dorsalis
ENSATEG00000016606	-	100	93.255	ENSSPUG00000010538	UPF1	100	93.255	Sphenodon_punctatus
ENSATEG00000016606	-	100	91.123	ENSSPAG00000000003	upf1	100	91.008	Stegastes_partitus
ENSATEG00000016606	-	100	99.001	ENSSPAG00000011521	-	100	99.001	Stegastes_partitus
ENSATEG00000016606	-	100	92.934	ENSSSCG00000039301	UPF1	99	94.828	Sus_scrofa
ENSATEG00000016606	-	82	86.809	ENSTGUG00000001057	UPF1	100	91.124	Taeniopygia_guttata
ENSATEG00000016606	-	100	97.275	ENSTRUG00000005131	-	100	97.275	Takifugu_rubripes
ENSATEG00000016606	-	100	92.468	ENSTRUG00000000150	upf1	100	92.287	Takifugu_rubripes
ENSATEG00000016606	-	100	89.267	ENSTTRG00000011544	UPF1	100	89.177	Tursiops_truncatus
ENSATEG00000016606	-	100	92.685	ENSUAMG00000007093	UPF1	100	92.685	Ursus_americanus
ENSATEG00000016606	-	95	94.923	ENSUMAG00000006652	UPF1	99	95.238	Ursus_maritimus
ENSATEG00000016606	-	100	92.774	ENSVVUG00000007797	UPF1	100	92.774	Vulpes_vulpes
ENSATEG00000016606	-	100	79.912	ENSXETG00000013602	upf1	100	79.912	Xenopus_tropicalis
ENSATEG00000016606	-	97	91.447	ENSXCOG00000015275	-	96	91.447	Xiphophorus_couchianus
ENSATEG00000016606	-	94	98.062	ENSXCOG00000005764	-	100	98.062	Xiphophorus_couchianus
ENSATEG00000016606	-	100	97.913	ENSXMAG00000002540	-	100	97.913	Xiphophorus_maculatus
ENSATEG00000016606	-	100	91.644	ENSXMAG00000001703	-	100	91.644	Xiphophorus_maculatus