EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000016710 (Gene tree)
Gene ID: 113153958
Gene Symbol: -
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 10959 bases
Position: chrOOHO01000017.1:2744033-2754991
Accession: 113153958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000024063	RRM_1	PF00076.22	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000024448	-	3275	-	ENSATEP00000024063	244 (aa)	XP_026203669	UPI000E464740

Gene Model

Click here to download ENSATEG00000016710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000016710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000016710	-	53	34.118	ENSATEG00000016043	dazap1	51	34.118
ENSATEG00000016710	-	100	63.922	ENSATEG00000016366	rbm38	98	63.889
ENSATEG00000016710	-	56	79.562	ENSATEG00000014195	rbm24a	100	60.081
ENSATEG00000016710	-	61	74.675	ENSATEG00000005396	rbm24b	98	60.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000016710	-	92	66.379	ENSG00000132819	RBM38	94	86.441	Homo_sapiens
ENSATEG00000016710	-	100	65.354	ENSAPOG00000003301	rbm38	98	65.339	Acanthochromis_polyacanthus
ENSATEG00000016710	-	100	95.902	ENSAPOG00000009939	-	100	95.902	Acanthochromis_polyacanthus
ENSATEG00000016710	-	100	94.672	ENSACIG00000012502	-	100	96.610	Amphilophus_citrinellus
ENSATEG00000016710	-	100	64.706	ENSACIG00000000010	rbm38	98	64.683	Amphilophus_citrinellus
ENSATEG00000016710	-	100	65.354	ENSAOCG00000013497	-	98	65.339	Amphiprion_ocellaris
ENSATEG00000016710	-	97	95.781	ENSAOCG00000012559	RBM38	100	95.781	Amphiprion_ocellaris
ENSATEG00000016710	-	100	65.354	ENSAPEG00000013137	rbm38	98	65.339	Amphiprion_percula
ENSATEG00000016710	-	100	95.492	ENSAPEG00000023581	-	100	95.492	Amphiprion_percula
ENSATEG00000016710	-	95	67.660	ENSACAG00000016238	RBM38	90	64.979	Anolis_carolinensis
ENSATEG00000016710	-	92	67.241	ENSANAG00000031959	RBM38	78	93.617	Aotus_nancymaae
ENSATEG00000016710	-	100	93.443	ENSACLG00000019514	-	100	93.443	Astatotilapia_calliptera
ENSATEG00000016710	-	100	79.918	ENSAMXG00000015601	-	100	77.869	Astyanax_mexicanus
ENSATEG00000016710	-	96	65.812	ENSAMXG00000038120	rbm38	81	72.539	Astyanax_mexicanus
ENSATEG00000016710	-	92	65.801	ENSBTAG00000008105	RBM38	89	64.783	Bos_taurus
ENSATEG00000016710	-	92	67.241	ENSCJAG00000019139	RBM38	78	93.617	Callithrix_jacchus
ENSATEG00000016710	-	92	67.100	ENSCAFG00020021943	RBM38	89	66.234	Canis_lupus_dingo
ENSATEG00000016710	-	92	64.502	ENSCHIG00000002609	RBM38	89	63.478	Capra_hircus
ENSATEG00000016710	-	92	65.948	ENSCPOG00000012781	RBM38	89	64.935	Cavia_porcellus
ENSATEG00000016710	-	92	67.241	ENSCCAG00000036872	RBM38	78	93.617	Cebus_capucinus
ENSATEG00000016710	-	92	66.379	ENSCATG00000032133	RBM38	78	93.617	Cercocebus_atys
ENSATEG00000016710	-	92	65.517	ENSCLAG00000005906	RBM38	92	64.681	Chinchilla_lanigera
ENSATEG00000016710	-	92	66.379	ENSCSAG00000015503	RBM38	89	65.236	Chlorocebus_sabaeus
ENSATEG00000016710	-	93	67.811	ENSCPBG00000024059	RBM38	99	66.087	Chrysemys_picta_bellii
ENSATEG00000016710	-	61	60.510	ENSCING00000025102	-	66	62.025	Ciona_intestinalis
ENSATEG00000016710	-	61	63.057	ENSCSAVG00000001132	-	57	62.987	Ciona_savignyi
ENSATEG00000016710	-	95	51.271	ENSCANG00000030105	-	81	48.954	Colobus_angolensis_palliatus
ENSATEG00000016710	-	72	73.626	ENSCGRG00001012928	Rbm38	89	62.771	Cricetulus_griseus_chok1gshd
ENSATEG00000016710	-	77	61.780	ENSCSEG00000020943	rbm38	60	66.298	Cynoglossus_semilaevis
ENSATEG00000016710	-	100	92.623	ENSCSEG00000004701	-	100	92.623	Cynoglossus_semilaevis
ENSATEG00000016710	-	99	61.044	ENSCVAG00000015952	rbm38	98	61.111	Cyprinodon_variegatus
ENSATEG00000016710	-	100	89.754	ENSCVAG00000005472	-	100	89.754	Cyprinodon_variegatus
ENSATEG00000016710	-	99	72.245	ENSDARG00000058818	rbm38	82	81.538	Danio_rerio
ENSATEG00000016710	-	92	67.249	ENSDNOG00000032004	RBM38	98	65.351	Dasypus_novemcinctus
ENSATEG00000016710	-	92	65.368	ENSECAG00000007700	RBM38	89	63.913	Equus_caballus
ENSATEG00000016710	-	92	65.665	ENSEEUG00000013489	RBM38	89	65.368	Erinaceus_europaeus
ENSATEG00000016710	-	86	71.429	ENSELUG00000000585	-	80	73.118	Esox_lucius
ENSATEG00000016710	-	100	81.928	ENSELUG00000005849	-	100	81.526	Esox_lucius
ENSATEG00000016710	-	92	66.234	ENSFCAG00000042916	RBM38	84	86.538	Felis_catus
ENSATEG00000016710	-	69	77.326	ENSFALG00000010805	RBM38	88	75.882	Ficedula_albicollis
ENSATEG00000016710	-	100	83.871	ENSFHEG00000006160	-	100	84.677	Fundulus_heteroclitus
ENSATEG00000016710	-	100	63.095	ENSFHEG00000017748	rbm38	98	61.508	Fundulus_heteroclitus
ENSATEG00000016710	-	75	87.027	ENSGMOG00000016655	-	99	85.405	Gadus_morhua
ENSATEG00000016710	-	93	66.379	ENSGALG00000026081	RBM38	99	66.667	Gallus_gallus
ENSATEG00000016710	-	95	66.810	ENSGACG00000015224	rbm38	100	66.810	Gasterosteus_aculeatus
ENSATEG00000016710	-	94	85.652	ENSGACG00000009873	-	100	85.652	Gasterosteus_aculeatus
ENSATEG00000016710	-	93	68.240	ENSGAGG00000001187	RBM38	99	66.087	Gopherus_agassizii
ENSATEG00000016710	-	100	65.098	ENSHBUG00000012058	rbm38	98	64.683	Haplochromis_burtoni
ENSATEG00000016710	-	100	93.443	ENSHBUG00000011778	-	100	93.443	Haplochromis_burtoni
ENSATEG00000016710	-	92	62.338	ENSHGLG00000015077	RBM38	89	64.255	Heterocephalus_glaber_female
ENSATEG00000016710	-	91	51.282	ENSHCOG00000019040	rbm38	78	55.102	Hippocampus_comes
ENSATEG00000016710	-	85	91.304	ENSHCOG00000005622	-	57	92.424	Hippocampus_comes
ENSATEG00000016710	-	100	73.061	ENSIPUG00000019349	-	100	72.245	Ictalurus_punctatus
ENSATEG00000016710	-	92	60.086	ENSKMAG00000012402	rbm38	98	60.086	Kryptolebias_marmoratus
ENSATEG00000016710	-	100	63.529	ENSLBEG00000018878	rbm38	98	62.698	Labrus_bergylta
ENSATEG00000016710	-	100	92.742	ENSLBEG00000016163	RBM38	100	92.742	Labrus_bergylta
ENSATEG00000016710	-	100	75.000	ENSLOCG00000003456	rbm38	100	74.590	Lepisosteus_oculatus
ENSATEG00000016710	-	92	66.379	ENSMFAG00000043808	RBM38	78	93.617	Macaca_fascicularis
ENSATEG00000016710	-	92	66.379	ENSMMUG00000031391	RBM38	78	93.617	Macaca_mulatta
ENSATEG00000016710	-	92	66.379	ENSMNEG00000034683	RBM38	78	93.617	Macaca_nemestrina
ENSATEG00000016710	-	100	66.667	ENSMAMG00000024135	rbm38	98	64.286	Mastacembelus_armatus
ENSATEG00000016710	-	100	95.902	ENSMAMG00000020499	RBM38	100	95.902	Mastacembelus_armatus
ENSATEG00000016710	-	100	65.098	ENSMZEG00005026036	rbm38	98	64.683	Maylandia_zebra
ENSATEG00000016710	-	100	93.443	ENSMZEG00005000849	-	100	93.443	Maylandia_zebra
ENSATEG00000016710	-	92	65.086	ENSMAUG00000021211	Rbm38	89	64.069	Mesocricetus_auratus
ENSATEG00000016710	-	92	66.524	ENSMICG00000038011	RBM38	98	65.368	Microcebus_murinus
ENSATEG00000016710	-	92	64.655	ENSMOCG00000008715	Rbm38	94	61.728	Microtus_ochrogaster
ENSATEG00000016710	-	100	95.082	ENSMMOG00000020051	-	100	95.082	Mola_mola
ENSATEG00000016710	-	93	66.957	ENSMODG00000016458	RBM38	91	65.939	Monodelphis_domestica
ENSATEG00000016710	-	69	71.765	ENSMALG00000022327	rbm38	72	72.024	Monopterus_albus
ENSATEG00000016710	-	77	97.354	ENSMALG00000004680	RBM38	72	97.354	Monopterus_albus
ENSATEG00000016710	-	92	62.771	MGP_CAROLIEiJ_G0024745	Rbm38	94	62.551	Mus_caroli
ENSATEG00000016710	-	92	62.771	ENSMUSG00000027510	Rbm38	94	62.551	Mus_musculus
ENSATEG00000016710	-	92	62.338	MGP_PahariEiJ_G0026186	Rbm38	94	62.140	Mus_pahari
ENSATEG00000016710	-	92	62.771	MGP_SPRETEiJ_G0025665	Rbm38	94	62.551	Mus_spretus
ENSATEG00000016710	-	72	75.275	ENSMPUG00000006518	RBM38	89	75.275	Mustela_putorius_furo
ENSATEG00000016710	-	92	65.368	ENSMLUG00000011140	RBM38	98	63.478	Myotis_lucifugus
ENSATEG00000016710	-	100	65.490	ENSNBRG00000022685	rbm38	98	65.079	Neolamprologus_brichardi
ENSATEG00000016710	-	100	93.443	ENSNBRG00000022545	-	100	93.443	Neolamprologus_brichardi
ENSATEG00000016710	-	92	66.379	ENSODEG00000007980	RBM38	89	65.957	Octodon_degus
ENSATEG00000016710	-	99	93.416	ENSONIG00000020324	-	100	93.416	Oreochromis_niloticus
ENSATEG00000016710	-	99	65.354	ENSONIG00000017073	rbm38	100	64.940	Oreochromis_niloticus
ENSATEG00000016710	-	92	66.812	ENSOANG00000009259	RBM38	81	64.758	Ornithorhynchus_anatinus
ENSATEG00000016710	-	100	87.805	ENSORLG00000027180	-	100	89.024	Oryzias_latipes
ENSATEG00000016710	-	100	57.540	ENSORLG00000012154	rbm38	98	57.540	Oryzias_latipes
ENSATEG00000016710	-	100	58.824	ENSORLG00020017871	rbm38	98	58.333	Oryzias_latipes_hni
ENSATEG00000016710	-	100	87.805	ENSORLG00020020751	-	100	89.024	Oryzias_latipes_hni
ENSATEG00000016710	-	100	59.684	ENSORLG00015012606	rbm38	98	58.333	Oryzias_latipes_hsok
ENSATEG00000016710	-	100	89.796	ENSORLG00015017040	-	100	89.796	Oryzias_latipes_hsok
ENSATEG00000016710	-	100	92.213	ENSOMEG00000023912	-	100	92.213	Oryzias_melastigma
ENSATEG00000016710	-	100	59.608	ENSOMEG00000006805	rbm38	98	59.127	Oryzias_melastigma
ENSATEG00000016710	-	92	66.810	ENSOGAG00000029136	RBM38	88	65.801	Otolemur_garnettii
ENSATEG00000016710	-	92	66.234	ENSPPRG00000009507	RBM38	84	86.538	Panthera_pardus
ENSATEG00000016710	-	72	75.275	ENSPTRG00000013661	RBM38	82	89.109	Pan_troglodytes
ENSATEG00000016710	-	52	84.127	ENSPTRG00000045845	-	68	84.127	Pan_troglodytes
ENSATEG00000016710	-	92	66.379	ENSPANG00000020919	-	78	93.617	Papio_anubis
ENSATEG00000016710	-	93	54.506	ENSPANG00000033127	-	91	52.586	Papio_anubis
ENSATEG00000016710	-	100	70.683	ENSPKIG00000025417	rbm38	100	70.683	Paramormyrops_kingsleyae
ENSATEG00000016710	-	100	72.470	ENSPKIG00000018122	-	95	90.090	Paramormyrops_kingsleyae
ENSATEG00000016710	-	96	66.529	ENSPSIG00000011649	RBM38	94	64.435	Pelodiscus_sinensis
ENSATEG00000016710	-	99	63.200	ENSPMGG00000011343	rbm38	98	62.000	Periophthalmus_magnuspinnatus
ENSATEG00000016710	-	100	84.274	ENSPMGG00000017094	-	100	84.274	Periophthalmus_magnuspinnatus
ENSATEG00000016710	-	93	66.524	ENSPCIG00000013648	RBM38	91	64.629	Phascolarctos_cinereus
ENSATEG00000016710	-	100	59.055	ENSPFOG00000011658	rbm38	98	60.784	Poecilia_formosa
ENSATEG00000016710	-	100	88.211	ENSPLAG00000002500	-	100	86.179	Poecilia_latipinna
ENSATEG00000016710	-	100	59.608	ENSPLAG00000005218	rbm38	98	60.784	Poecilia_latipinna
ENSATEG00000016710	-	100	58.661	ENSPMEG00000015770	rbm38	98	60.784	Poecilia_mexicana
ENSATEG00000016710	-	100	59.055	ENSPREG00000007398	rbm38	98	60.784	Poecilia_reticulata
ENSATEG00000016710	-	92	66.094	ENSPCOG00000026201	RBM38	77	93.617	Propithecus_coquereli
ENSATEG00000016710	-	96	41.909	ENSPVAG00000006457	RBM38	66	85.484	Pteropus_vampyrus
ENSATEG00000016710	-	100	93.443	ENSPNYG00000019727	-	100	95.763	Pundamilia_nyererei
ENSATEG00000016710	-	100	64.706	ENSPNYG00000021373	rbm38	98	64.286	Pundamilia_nyererei
ENSATEG00000016710	-	91	71.429	ENSPNAG00000010596	rbm38	82	80.102	Pygocentrus_nattereri
ENSATEG00000016710	-	100	79.098	ENSPNAG00000015123	-	96	84.848	Pygocentrus_nattereri
ENSATEG00000016710	-	92	65.086	ENSRNOG00000006420	Rbm38	94	62.140	Rattus_norvegicus
ENSATEG00000016710	-	93	54.783	ENSRROG00000036388	-	88	53.043	Rhinopithecus_roxellana
ENSATEG00000016710	-	92	66.810	ENSSBOG00000031053	RBM38	93	89.109	Saimiri_boliviensis_boliviensis
ENSATEG00000016710	-	100	70.968	ENSSFOG00015004453	rbm38	100	73.684	Scleropages_formosus
ENSATEG00000016710	-	100	67.451	ENSSDUG00000022611	rbm38	98	67.460	Seriola_dumerili
ENSATEG00000016710	-	100	96.721	ENSSDUG00000021082	RBM38	100	96.721	Seriola_dumerili
ENSATEG00000016710	-	100	67.451	ENSSLDG00000010845	rbm38	98	67.460	Seriola_lalandi_dorsalis
ENSATEG00000016710	-	100	97.541	ENSSLDG00000011778	RBM38	100	97.541	Seriola_lalandi_dorsalis
ENSATEG00000016710	-	100	97.131	ENSSPAG00000020989	RBM38	100	97.131	Stegastes_partitus
ENSATEG00000016710	-	100	65.490	ENSSPAG00000011113	rbm38	98	65.476	Stegastes_partitus
ENSATEG00000016710	-	92	65.801	ENSSSCG00000007504	RBM38	89	64.783	Sus_scrofa
ENSATEG00000016710	-	100	88.980	ENSTRUG00000019869	-	100	88.980	Takifugu_rubripes
ENSATEG00000016710	-	98	64.228	ENSTRUG00000024954	rbm38	97	63.821	Takifugu_rubripes
ENSATEG00000016710	-	95	87.879	ENSTNIG00000007093	-	100	86.580	Tetraodon_nigroviridis
ENSATEG00000016710	-	92	66.810	ENSUAMG00000019780	RBM38	89	65.948	Ursus_americanus
ENSATEG00000016710	-	92	67.100	ENSVVUG00000017246	RBM38	89	66.234	Vulpes_vulpes
ENSATEG00000016710	-	93	64.348	ENSXETG00000011268	rbm38	97	63.478	Xenopus_tropicalis
ENSATEG00000016710	-	69	77.273	ENSXCOG00000017324	-	68	82.803	Xiphophorus_couchianus
ENSATEG00000016710	-	100	60.558	ENSXMAG00000023662	rbm38	98	62.302	Xiphophorus_maculatus