EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000016773 (Gene tree)
Gene ID: 113161077
Gene Symbol: polr1a
Alias: fa26a03|sb:cb935|wu:fa26a03
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 15920 bases
Position: chrOOHO01000011.1:3841687-3857606
Accession: 113161077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000024298	RNA_pol_Rpb1_5	PF04998.17	4.4e-100	1	1
ENSATEP00000024370	RNA_pol_Rpb1_5	PF04998.17	4.5e-100	1	1
ENSATEP00000024370	RNA_pol_Rpb1_4	PF05000.17	2.5e-20	1	1
ENSATEP00000024298	RNA_pol_Rpb1_4	PF05000.17	4.7e-20	1	1
ENSATEP00000024298	RNA_pol_Rpb1_2	PF00623.20	9.2e-69	1	1
ENSATEP00000024370	RNA_pol_Rpb1_2	PF00623.20	9.3e-69	1	1
ENSATEP00000024370	RNA_pol_Rpb1_3	PF04983.18	1.1e-36	1	1
ENSATEP00000024298	RNA_pol_Rpb1_3	PF04983.18	1.1e-36	1	1
ENSATEP00000024298	RNA_pol_Rpb1_1	PF04997.12	1.4e-24	1	1
ENSATEP00000024370	RNA_pol_Rpb1_1	PF04997.12	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000024686	-	6199	-	ENSATEP00000024298	1686 (aa)	XP_026214374	UPI000E45E21A
ENSATET00000024760	-	5064	-	ENSATEP00000024370	1687 (aa)	-	-

Gene Model

Click here to download ENSATEG00000016773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000016773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000016773	polr1a	62	32.644	ENSATEG00000023277	polr3a	67	32.644

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000016773	polr1a	100	65.954	ENSG00000068654	POLR1A	100	66.031	Homo_sapiens
ENSATEG00000016773	polr1a	69	88.235	ENSAPOG00000017945	polr1a	99	88.235	Acanthochromis_polyacanthus
ENSATEG00000016773	polr1a	100	66.705	ENSAMEG00000005807	POLR1A	100	70.612	Ailuropoda_melanoleuca
ENSATEG00000016773	polr1a	97	86.488	ENSACIG00000022147	polr1a	99	86.709	Amphilophus_citrinellus
ENSATEG00000016773	polr1a	100	87.382	ENSAOCG00000017336	polr1a	100	87.688	Amphiprion_ocellaris
ENSATEG00000016773	polr1a	100	87.382	ENSAPEG00000016105	polr1a	98	91.667	Amphiprion_percula
ENSATEG00000016773	polr1a	86	66.510	ENSAPLG00000013871	POLR1A	99	67.391	Anas_platyrhynchos
ENSATEG00000016773	polr1a	99	65.195	ENSACAG00000012141	POLR1A	99	65.078	Anolis_carolinensis
ENSATEG00000016773	polr1a	100	65.414	ENSANAG00000033927	POLR1A	100	65.110	Aotus_nancymaae
ENSATEG00000016773	polr1a	100	80.924	ENSACLG00000020541	polr1a	100	80.924	Astatotilapia_calliptera
ENSATEG00000016773	polr1a	100	66.300	ENSBTAG00000006481	POLR1A	100	66.512	Bos_taurus
ENSATEG00000016773	polr1a	99	37.955	WBGene00012999	rpoa-1	98	38.019	Caenorhabditis_elegans
ENSATEG00000016773	polr1a	100	65.260	ENSCJAG00000019547	POLR1A	100	65.569	Callithrix_jacchus
ENSATEG00000016773	polr1a	100	66.532	ENSCAFG00000007613	POLR1A	100	67.014	Canis_familiaris
ENSATEG00000016773	polr1a	100	66.765	ENSCAFG00020014752	POLR1A	100	66.859	Canis_lupus_dingo
ENSATEG00000016773	polr1a	100	65.738	ENSCHIG00000018204	POLR1A	100	65.736	Capra_hircus
ENSATEG00000016773	polr1a	100	65.820	ENSTSYG00000002761	POLR1A	100	65.436	Carlito_syrichta
ENSATEG00000016773	polr1a	97	62.426	ENSCAPG00000010132	POLR1A	99	63.544	Cavia_aperea
ENSATEG00000016773	polr1a	100	65.438	ENSCPOG00000012350	POLR1A	100	66.532	Cavia_porcellus
ENSATEG00000016773	polr1a	100	65.549	ENSCCAG00000019839	POLR1A	100	65.685	Cebus_capucinus
ENSATEG00000016773	polr1a	100	66.069	ENSCATG00000029786	POLR1A	100	66.147	Cercocebus_atys
ENSATEG00000016773	polr1a	100	65.719	ENSCLAG00000005187	POLR1A	100	66.415	Chinchilla_lanigera
ENSATEG00000016773	polr1a	100	65.723	ENSCSAG00000016251	POLR1A	100	65.973	Chlorocebus_sabaeus
ENSATEG00000016773	polr1a	99	66.783	ENSCPBG00000001115	POLR1A	99	67.114	Chrysemys_picta_bellii
ENSATEG00000016773	polr1a	99	47.657	ENSCSAVG00000007184	-	99	47.635	Ciona_savignyi
ENSATEG00000016773	polr1a	100	63.337	ENSCANG00000031785	POLR1A	100	63.337	Colobus_angolensis_palliatus
ENSATEG00000016773	polr1a	96	66.825	ENSCGRG00001006651	Polr1a	100	66.825	Cricetulus_griseus_chok1gshd
ENSATEG00000016773	polr1a	60	65.497	ENSCGRG00000010834	Polr1a	100	64.569	Cricetulus_griseus_crigri
ENSATEG00000016773	polr1a	100	78.777	ENSCSEG00000020190	polr1a	100	78.777	Cynoglossus_semilaevis
ENSATEG00000016773	polr1a	100	82.429	ENSCVAG00000020941	polr1a	100	82.547	Cyprinodon_variegatus
ENSATEG00000016773	polr1a	100	72.982	ENSDARG00000098375	polr1a	100	72.924	Danio_rerio
ENSATEG00000016773	polr1a	100	63.018	ENSDNOG00000010829	POLR1A	100	62.478	Dasypus_novemcinctus
ENSATEG00000016773	polr1a	100	65.782	ENSDORG00000008298	Polr1a	100	65.172	Dipodomys_ordii
ENSATEG00000016773	polr1a	79	43.964	FBgn0019938	RpI1	99	42.544	Drosophila_melanogaster
ENSATEG00000016773	polr1a	72	87.500	ENSETEG00000000412	-	71	87.500	Echinops_telfairi
ENSATEG00000016773	polr1a	89	47.070	ENSEBUG00000005667	-	99	47.852	Eptatretus_burgeri
ENSATEG00000016773	polr1a	100	66.089	ENSEASG00005001625	POLR1A	100	65.994	Equus_asinus_asinus
ENSATEG00000016773	polr1a	100	66.205	ENSECAG00000010092	POLR1A	99	70.674	Equus_caballus
ENSATEG00000016773	polr1a	100	66.205	ENSECAG00000030510	-	99	70.674	Equus_caballus
ENSATEG00000016773	polr1a	100	66.205	ENSECAG00000036306	-	99	70.674	Equus_caballus
ENSATEG00000016773	polr1a	85	76.653	ENSEEUG00000000676	POLR1A	80	84.252	Erinaceus_europaeus
ENSATEG00000016773	polr1a	100	75.146	ENSELUG00000012769	polr1a	99	74.520	Esox_lucius
ENSATEG00000016773	polr1a	100	66.320	ENSFCAG00000008966	POLR1A	100	66.590	Felis_catus
ENSATEG00000016773	polr1a	99	65.400	ENSFALG00000010082	POLR1A	99	65.961	Ficedula_albicollis
ENSATEG00000016773	polr1a	100	65.993	ENSFDAG00000013726	POLR1A	100	66.280	Fukomys_damarensis
ENSATEG00000016773	polr1a	100	79.598	ENSFHEG00000005996	polr1a	100	79.349	Fundulus_heteroclitus
ENSATEG00000016773	polr1a	100	69.751	ENSGMOG00000002230	polr1a	100	69.846	Gadus_morhua
ENSATEG00000016773	polr1a	89	63.030	ENSGALG00000038160	-	98	62.789	Gallus_gallus
ENSATEG00000016773	polr1a	100	81.324	ENSGAFG00000015266	polr1a	100	81.501	Gambusia_affinis
ENSATEG00000016773	polr1a	100	82.445	ENSGACG00000018791	polr1a	100	82.561	Gasterosteus_aculeatus
ENSATEG00000016773	polr1a	89	67.911	ENSGAGG00000004984	-	95	73.171	Gopherus_agassizii
ENSATEG00000016773	polr1a	100	66.031	ENSGGOG00000001788	POLR1A	100	66.089	Gorilla_gorilla
ENSATEG00000016773	polr1a	90	82.578	ENSHBUG00000020021	polr1a	99	82.374	Haplochromis_burtoni
ENSATEG00000016773	polr1a	100	66.016	ENSHGLG00000006334	POLR1A	100	66.744	Heterocephalus_glaber_female
ENSATEG00000016773	polr1a	100	65.827	ENSHGLG00100006614	POLR1A	100	66.551	Heterocephalus_glaber_male
ENSATEG00000016773	polr1a	100	77.173	ENSHCOG00000003345	polr1a	100	76.873	Hippocampus_comes
ENSATEG00000016773	polr1a	100	71.963	ENSIPUG00000013174	polr1a	100	71.979	Ictalurus_punctatus
ENSATEG00000016773	polr1a	100	65.238	ENSSTOG00000012580	POLR1A	100	65.873	Ictidomys_tridecemlineatus
ENSATEG00000016773	polr1a	100	65.647	ENSJJAG00000013113	Polr1a	100	65.876	Jaculus_jaculus
ENSATEG00000016773	polr1a	100	86.237	ENSKMAG00000007399	polr1a	100	86.237	Kryptolebias_marmoratus
ENSATEG00000016773	polr1a	94	87.402	ENSLBEG00000015401	polr1a	99	87.974	Labrus_bergylta
ENSATEG00000016773	polr1a	53	70.870	ENSLACG00000003218	polr1a	100	70.870	Latimeria_chalumnae
ENSATEG00000016773	polr1a	100	71.594	ENSLOCG00000010881	polr1a	100	71.635	Lepisosteus_oculatus
ENSATEG00000016773	polr1a	100	66.415	ENSLAFG00000014948	POLR1A	100	66.358	Loxodonta_africana
ENSATEG00000016773	polr1a	100	65.723	ENSMFAG00000046097	POLR1A	100	66.532	Macaca_fascicularis
ENSATEG00000016773	polr1a	100	65.723	ENSMMUG00000015815	POLR1A	100	66.532	Macaca_mulatta
ENSATEG00000016773	polr1a	100	65.723	ENSMNEG00000043313	POLR1A	100	66.532	Macaca_nemestrina
ENSATEG00000016773	polr1a	100	65.434	ENSMLEG00000042428	POLR1A	100	66.243	Mandrillus_leucophaeus
ENSATEG00000016773	polr1a	100	88.145	ENSMAMG00000016565	polr1a	100	88.145	Mastacembelus_armatus
ENSATEG00000016773	polr1a	100	87.167	ENSMZEG00005004915	polr1a	100	87.108	Maylandia_zebra
ENSATEG00000016773	polr1a	99	62.796	ENSMGAG00000013111	POLR1A	99	63.246	Meleagris_gallopavo
ENSATEG00000016773	polr1a	91	65.868	ENSMAUG00000008497	Polr1a	99	65.574	Mesocricetus_auratus
ENSATEG00000016773	polr1a	100	66.127	ENSMICG00000000757	POLR1A	100	66.107	Microcebus_murinus
ENSATEG00000016773	polr1a	100	65.932	ENSMOCG00000000122	Polr1a	100	65.706	Microtus_ochrogaster
ENSATEG00000016773	polr1a	100	82.273	ENSMMOG00000010216	polr1a	100	82.627	Mola_mola
ENSATEG00000016773	polr1a	100	62.179	ENSMODG00000009335	POLR1A	100	62.521	Monodelphis_domestica
ENSATEG00000016773	polr1a	100	87.780	ENSMALG00000013363	polr1a	100	88.260	Monopterus_albus
ENSATEG00000016773	polr1a	100	64.726	MGP_CAROLIEiJ_G0028494	Polr1a	100	64.948	Mus_caroli
ENSATEG00000016773	polr1a	100	64.919	ENSMUSG00000049553	Polr1a	100	64.882	Mus_musculus
ENSATEG00000016773	polr1a	100	65.840	MGP_PahariEiJ_G0022230	Polr1a	100	65.569	Mus_pahari
ENSATEG00000016773	polr1a	100	64.448	MGP_SPRETEiJ_G0029499	Polr1a	100	63.993	Mus_spretus
ENSATEG00000016773	polr1a	100	66.050	ENSMPUG00000009135	POLR1A	100	66.782	Mustela_putorius_furo
ENSATEG00000016773	polr1a	100	65.957	ENSMLUG00000015723	POLR1A	100	66.609	Myotis_lucifugus
ENSATEG00000016773	polr1a	100	65.739	ENSNGAG00000017907	Polr1a	100	66.183	Nannospalax_galili
ENSATEG00000016773	polr1a	100	87.049	ENSNBRG00000000519	polr1a	100	87.049	Neolamprologus_brichardi
ENSATEG00000016773	polr1a	100	64.269	ENSNLEG00000002264	POLR1A	100	64.175	Nomascus_leucogenys
ENSATEG00000016773	polr1a	76	83.465	ENSMEUG00000011665	-	75	83.465	Notamacropus_eugenii
ENSATEG00000016773	polr1a	99	60.859	ENSOPRG00000008269	POLR1A	100	60.317	Ochotona_princeps
ENSATEG00000016773	polr1a	100	65.916	ENSODEG00000003542	POLR1A	100	65.587	Octodon_degus
ENSATEG00000016773	polr1a	100	85.689	ENSONIG00000015895	polr1a	100	86.862	Oreochromis_niloticus
ENSATEG00000016773	polr1a	100	66.395	ENSOCUG00000010138	POLR1A	100	66.589	Oryctolagus_cuniculus
ENSATEG00000016773	polr1a	100	82.753	ENSORLG00000008753	polr1a	99	82.704	Oryzias_latipes
ENSATEG00000016773	polr1a	100	79.221	ENSORLG00020020726	polr1a	99	79.233	Oryzias_latipes_hni
ENSATEG00000016773	polr1a	95	87.234	ENSORLG00015016071	polr1a	98	87.234	Oryzias_latipes_hsok
ENSATEG00000016773	polr1a	100	65.742	ENSOGAG00000004031	POLR1A	100	65.954	Otolemur_garnettii
ENSATEG00000016773	polr1a	100	66.224	ENSOARG00000020601	POLR1A	100	66.532	Ovis_aries
ENSATEG00000016773	polr1a	100	65.800	ENSPPAG00000042450	POLR1A	100	65.858	Pan_paniscus
ENSATEG00000016773	polr1a	100	66.551	ENSPPRG00000006702	POLR1A	100	66.647	Panthera_pardus
ENSATEG00000016773	polr1a	100	66.149	ENSPTIG00000018783	POLR1A	100	66.244	Panthera_tigris_altaica
ENSATEG00000016773	polr1a	100	66.069	ENSPTRG00000012147	POLR1A	100	65.916	Pan_troglodytes
ENSATEG00000016773	polr1a	100	65.896	ENSPANG00000025908	POLR1A	100	65.973	Papio_anubis
ENSATEG00000016773	polr1a	100	71.036	ENSPKIG00000005468	polr1a	99	74.306	Paramormyrops_kingsleyae
ENSATEG00000016773	polr1a	63	64.599	ENSPSIG00000009321	-	99	64.070	Pelodiscus_sinensis
ENSATEG00000016773	polr1a	55	82.213	ENSPMGG00000009718	polr1a	95	82.213	Periophthalmus_magnuspinnatus
ENSATEG00000016773	polr1a	100	65.835	ENSPEMG00000022224	Polr1a	100	65.323	Peromyscus_maniculatus_bairdii
ENSATEG00000016773	polr1a	95	65.284	ENSPCIG00000004222	POLR1A	99	64.656	Phascolarctos_cinereus
ENSATEG00000016773	polr1a	100	83.118	ENSPFOG00000005025	polr1a	100	82.951	Poecilia_formosa
ENSATEG00000016773	polr1a	100	83.068	ENSPLAG00000021389	polr1a	100	83.068	Poecilia_latipinna
ENSATEG00000016773	polr1a	100	80.259	ENSPMEG00000006463	polr1a	100	80.364	Poecilia_mexicana
ENSATEG00000016773	polr1a	100	82.649	ENSPREG00000002389	polr1a	100	82.619	Poecilia_reticulata
ENSATEG00000016773	polr1a	100	65.685	ENSPPYG00000012217	POLR1A	100	66.146	Pongo_abelii
ENSATEG00000016773	polr1a	91	65.944	ENSPCAG00000011582	POLR1A	87	65.944	Procavia_capensis
ENSATEG00000016773	polr1a	100	66.320	ENSPCOG00000026987	POLR1A	100	65.975	Propithecus_coquereli
ENSATEG00000016773	polr1a	95	65.984	ENSPVAG00000012674	POLR1A	95	65.934	Pteropus_vampyrus
ENSATEG00000016773	polr1a	100	87.167	ENSPNYG00000000026	polr1a	100	87.108	Pundamilia_nyererei
ENSATEG00000016773	polr1a	100	72.956	ENSPNAG00000019223	polr1a	100	72.839	Pygocentrus_nattereri
ENSATEG00000016773	polr1a	100	66.241	ENSRNOG00000009545	Polr1a	100	65.603	Rattus_norvegicus
ENSATEG00000016773	polr1a	100	65.491	ENSRBIG00000028335	POLR1A	100	65.665	Rhinopithecus_bieti
ENSATEG00000016773	polr1a	100	65.491	ENSRROG00000031473	POLR1A	100	65.665	Rhinopithecus_roxellana
ENSATEG00000016773	polr1a	99	36.116	YOR341W	RPA190	99	35.581	Saccharomyces_cerevisiae
ENSATEG00000016773	polr1a	100	65.318	ENSSBOG00000030262	POLR1A	100	65.453	Saimiri_boliviensis_boliviensis
ENSATEG00000016773	polr1a	100	60.644	ENSSHAG00000014739	POLR1A	100	61.012	Sarcophilus_harrisii
ENSATEG00000016773	polr1a	100	70.688	ENSSFOG00015019716	polr1a	100	70.787	Scleropages_formosus
ENSATEG00000016773	polr1a	100	87.271	ENSSMAG00000014342	polr1a	100	87.507	Scophthalmus_maximus
ENSATEG00000016773	polr1a	100	89.381	ENSSDUG00000014631	polr1a	100	90.619	Seriola_dumerili
ENSATEG00000016773	polr1a	100	85.521	ENSSLDG00000024095	polr1a	100	86.521	Seriola_lalandi_dorsalis
ENSATEG00000016773	polr1a	71	95.122	ENSSARG00000003136	-	71	95.122	Sorex_araneus
ENSATEG00000016773	polr1a	95	72.500	ENSSPUG00000004215	POLR1A	98	72.500	Sphenodon_punctatus
ENSATEG00000016773	polr1a	64	88.523	ENSSPAG00000016341	polr1a	95	88.523	Stegastes_partitus
ENSATEG00000016773	polr1a	83	67.341	ENSSSCG00000008226	POLR1A	99	67.204	Sus_scrofa
ENSATEG00000016773	polr1a	99	64.882	ENSTGUG00000010704	POLR1A	100	64.824	Taeniopygia_guttata
ENSATEG00000016773	polr1a	100	80.944	ENSTRUG00000002210	polr1a	99	80.966	Takifugu_rubripes
ENSATEG00000016773	polr1a	100	74.111	ENSTNIG00000010116	polr1a	100	74.169	Tetraodon_nigroviridis
ENSATEG00000016773	polr1a	73	83.628	ENSTBEG00000008646	POLR1A	74	83.628	Tupaia_belangeri
ENSATEG00000016773	polr1a	100	63.331	ENSTTRG00000008597	POLR1A	100	64.232	Tursiops_truncatus
ENSATEG00000016773	polr1a	69	66.807	ENSUAMG00000012158	-	94	67.679	Ursus_americanus
ENSATEG00000016773	polr1a	100	65.906	ENSUMAG00000006700	POLR1A	97	70.127	Ursus_maritimus
ENSATEG00000016773	polr1a	100	66.474	ENSVVUG00000001245	POLR1A	100	66.898	Vulpes_vulpes
ENSATEG00000016773	polr1a	100	63.536	ENSXETG00000001952	polr1a	99	64.410	Xenopus_tropicalis
ENSATEG00000016773	polr1a	100	83.373	ENSXMAG00000004032	polr1a	100	83.373	Xiphophorus_maculatus