EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000017849 (Gene tree)
Gene ID: 113147927
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 23177 bases
Position: chrOOHO01000007.1:2756541-2779717
Accession: 113147927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000025753	La	PF05383.17	1.5e-21	1	1
ENSATEP00000025739	La	PF05383.17	1.6e-21	1	1
ENSATEP00000025718	La	PF05383.17	1.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000026136	-	5130	-	ENSATEP00000025718	1073 (aa)	-	-
ENSATET00000026171	-	4965	-	ENSATEP00000025753	1018 (aa)	-	-
ENSATET00000026157	-	5106	-	ENSATEP00000025739	1065 (aa)	XP_026195048	UPI000E45EBD6

Gene Model

Click here to download ENSATEG00000017849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000017849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000017849	larp1b	88	52.113	ENSATEG00000013523	larp1	89	51.786

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000017849	larp1b	89	55.176	ENSG00000138709	LARP1B	99	56.124	Homo_sapiens
ENSATEG00000017849	larp1b	100	84.907	ENSAPOG00000020101	larp1b	100	84.907	Acanthochromis_polyacanthus
ENSATEG00000017849	larp1b	53	52.604	ENSAMEG00000002748	LARP1B	99	52.083	Ailuropoda_melanoleuca
ENSATEG00000017849	larp1b	100	79.310	ENSACIG00000023890	larp1b	100	79.693	Amphilophus_citrinellus
ENSATEG00000017849	larp1b	90	79.440	ENSAOCG00000014268	larp1b	99	79.656	Amphiprion_ocellaris
ENSATEG00000017849	larp1b	100	84.772	ENSAPEG00000004126	larp1b	100	84.384	Amphiprion_percula
ENSATEG00000017849	larp1b	83	55.235	ENSAPLG00000010129	LARP1B	99	55.591	Anas_platyrhynchos
ENSATEG00000017849	larp1b	84	57.219	ENSACAG00000011338	LARP1B	93	57.113	Anolis_carolinensis
ENSATEG00000017849	larp1b	63	53.783	ENSANAG00000034618	LARP1B	86	53.659	Aotus_nancymaae
ENSATEG00000017849	larp1b	100	82.951	ENSACLG00000011948	larp1b	100	83.318	Astatotilapia_calliptera
ENSATEG00000017849	larp1b	93	58.722	ENSAMXG00000006805	larp1b	89	61.146	Astyanax_mexicanus
ENSATEG00000017849	larp1b	87	56.413	ENSBTAG00000012135	LARP1B	99	49.546	Bos_taurus
ENSATEG00000017849	larp1b	83	57.111	ENSCJAG00000003338	LARP1B	99	57.044	Callithrix_jacchus
ENSATEG00000017849	larp1b	86	56.978	ENSCAFG00000003831	LARP1B	99	58.440	Canis_familiaris
ENSATEG00000017849	larp1b	86	56.649	ENSCAFG00020018899	LARP1B	97	57.143	Canis_lupus_dingo
ENSATEG00000017849	larp1b	85	55.920	ENSCHIG00000023144	LARP1B	97	55.829	Capra_hircus
ENSATEG00000017849	larp1b	84	56.204	ENSCCAG00000021948	LARP1B	98	56.602	Cebus_capucinus
ENSATEG00000017849	larp1b	84	55.816	ENSCATG00000013541	LARP1B	99	55.272	Cercocebus_atys
ENSATEG00000017849	larp1b	84	56.596	ENSCSAG00000003582	LARP1B	99	56.051	Chlorocebus_sabaeus
ENSATEG00000017849	larp1b	85	51.801	ENSCHOG00000005354	LARP1B	99	52.034	Choloepus_hoffmanni
ENSATEG00000017849	larp1b	90	56.900	ENSCPBG00000017480	LARP1B	92	56.700	Chrysemys_picta_bellii
ENSATEG00000017849	larp1b	83	56.796	ENSCANG00000026958	LARP1B	99	56.119	Colobus_angolensis_palliatus
ENSATEG00000017849	larp1b	100	77.605	ENSCSEG00000013519	larp1b	100	78.336	Cynoglossus_semilaevis
ENSATEG00000017849	larp1b	100	77.696	ENSCVAG00000005046	larp1b	100	77.972	Cyprinodon_variegatus
ENSATEG00000017849	larp1b	99	62.195	ENSDARG00000061169	larp1b	93	62.984	Danio_rerio
ENSATEG00000017849	larp1b	75	54.467	ENSETEG00000012497	LARP1B	88	54.035	Echinops_telfairi
ENSATEG00000017849	larp1b	88	45.623	ENSEBUG00000003668	larp1b	95	45.582	Eptatretus_burgeri
ENSATEG00000017849	larp1b	86	56.008	ENSEASG00005018106	LARP1B	99	55.181	Equus_asinus_asinus
ENSATEG00000017849	larp1b	92	54.413	ENSECAG00000001088	LARP1B	89	54.429	Equus_caballus
ENSATEG00000017849	larp1b	75	63.690	ENSELUG00000023774	larp1b	99	57.935	Esox_lucius
ENSATEG00000017849	larp1b	51	49.821	ENSFCAG00000014650	-	99	49.455	Felis_catus
ENSATEG00000017849	larp1b	84	56.038	ENSFALG00000008098	LARP1B	98	55.685	Ficedula_albicollis
ENSATEG00000017849	larp1b	100	80.058	ENSFHEG00000010264	larp1b	97	79.846	Fundulus_heteroclitus
ENSATEG00000017849	larp1b	86	73.356	ENSGMOG00000005207	larp1b	87	73.702	Gadus_morhua
ENSATEG00000017849	larp1b	87	55.787	ENSGALG00000010207	LARP1B	91	55.026	Gallus_gallus
ENSATEG00000017849	larp1b	88	80.265	ENSGAFG00000012012	larp1b	99	80.182	Gambusia_affinis
ENSATEG00000017849	larp1b	100	70.971	ENSGACG00000004609	larp1b	100	72.558	Gasterosteus_aculeatus
ENSATEG00000017849	larp1b	90	56.570	ENSGAGG00000017209	LARP1B	91	56.570	Gopherus_agassizii
ENSATEG00000017849	larp1b	84	56.077	ENSGGOG00000015900	LARP1B	99	55.957	Gorilla_gorilla
ENSATEG00000017849	larp1b	100	83.119	ENSHBUG00000009730	larp1b	100	83.486	Haplochromis_burtoni
ENSATEG00000017849	larp1b	70	79.050	ENSHCOG00000000918	larp1b	96	82.301	Hippocampus_comes
ENSATEG00000017849	larp1b	94	62.948	ENSIPUG00000012138	larp1b	88	63.560	Ictalurus_punctatus
ENSATEG00000017849	larp1b	99	77.615	ENSKMAG00000011589	larp1b	98	78.657	Kryptolebias_marmoratus
ENSATEG00000017849	larp1b	100	83.703	ENSLBEG00000005655	larp1b	100	83.896	Labrus_bergylta
ENSATEG00000017849	larp1b	97	56.256	ENSLACG00000015247	LARP1B	95	56.350	Latimeria_chalumnae
ENSATEG00000017849	larp1b	89	65.319	ENSLOCG00000010684	larp1b	97	61.484	Lepisosteus_oculatus
ENSATEG00000017849	larp1b	84	56.990	ENSMFAG00000002218	LARP1B	99	56.443	Macaca_fascicularis
ENSATEG00000017849	larp1b	84	56.884	ENSMMUG00000021347	LARP1B	99	56.337	Macaca_mulatta
ENSATEG00000017849	larp1b	76	61.364	ENSMNEG00000030406	LARP1B	98	61.506	Macaca_nemestrina
ENSATEG00000017849	larp1b	84	55.176	ENSMLEG00000009306	LARP1B	99	56.071	Mandrillus_leucophaeus
ENSATEG00000017849	larp1b	99	87.561	ENSMAMG00000000081	larp1b	99	87.561	Mastacembelus_armatus
ENSATEG00000017849	larp1b	76	84.665	ENSMZEG00005002545	larp1b	100	85.180	Maylandia_zebra
ENSATEG00000017849	larp1b	79	56.988	ENSMGAG00000004809	LARP1B	100	51.623	Meleagris_gallopavo
ENSATEG00000017849	larp1b	50	41.698	ENSMICG00000028052	-	99	39.245	Microcebus_murinus
ENSATEG00000017849	larp1b	85	57.188	ENSMICG00000036111	LARP1B	99	57.481	Microcebus_murinus
ENSATEG00000017849	larp1b	91	55.989	ENSMODG00000012300	LARP1B	89	55.545	Monodelphis_domestica
ENSATEG00000017849	larp1b	100	86.927	ENSMALG00000003638	larp1b	100	86.927	Monopterus_albus
ENSATEG00000017849	larp1b	88	56.790	ENSMPUG00000017365	LARP1B	86	55.980	Mustela_putorius_furo
ENSATEG00000017849	larp1b	84	55.147	ENSMLUG00000010229	LARP1B	99	54.832	Myotis_lucifugus
ENSATEG00000017849	larp1b	92	77.554	ENSNBRG00000023846	larp1b	100	78.454	Neolamprologus_brichardi
ENSATEG00000017849	larp1b	84	55.804	ENSNLEG00000013819	LARP1B	99	55.685	Nomascus_leucogenys
ENSATEG00000017849	larp1b	66	59.149	ENSMEUG00000010308	LARP1B	76	59.568	Notamacropus_eugenii
ENSATEG00000017849	larp1b	77	51.703	ENSOPRG00000005478	LARP1B	89	52.651	Ochotona_princeps
ENSATEG00000017849	larp1b	88	81.716	ENSONIG00000012386	larp1b	100	80.797	Oreochromis_niloticus
ENSATEG00000017849	larp1b	86	55.263	ENSOCUG00000013330	LARP1B	97	55.579	Oryctolagus_cuniculus
ENSATEG00000017849	larp1b	97	76.337	ENSORLG00000017954	larp1b	100	75.553	Oryzias_latipes
ENSATEG00000017849	larp1b	100	75.138	ENSORLG00020013081	larp1b	100	75.138	Oryzias_latipes_hni
ENSATEG00000017849	larp1b	100	75.842	ENSORLG00015009580	larp1b	100	75.842	Oryzias_latipes_hsok
ENSATEG00000017849	larp1b	100	78.770	ENSOMEG00000004210	larp1b	100	79.251	Oryzias_melastigma
ENSATEG00000017849	larp1b	83	58.628	ENSOGAG00000005771	LARP1B	100	57.522	Otolemur_garnettii
ENSATEG00000017849	larp1b	85	55.992	ENSOARG00000015300	LARP1B	99	55.437	Ovis_aries
ENSATEG00000017849	larp1b	84	56.183	ENSPPAG00000030439	LARP1B	99	56.064	Pan_paniscus
ENSATEG00000017849	larp1b	51	49.821	ENSPPRG00000002743	-	99	49.455	Panthera_pardus
ENSATEG00000017849	larp1b	51	49.821	ENSPTIG00000011225	LARP1B	99	49.455	Panthera_tigris_altaica
ENSATEG00000017849	larp1b	84	56.183	ENSPTRG00000016437	LARP1B	99	56.064	Pan_troglodytes
ENSATEG00000017849	larp1b	84	56.990	ENSPANG00000012488	LARP1B	99	56.443	Papio_anubis
ENSATEG00000017849	larp1b	85	60.403	ENSPKIG00000014360	larp1b	94	55.207	Paramormyrops_kingsleyae
ENSATEG00000017849	larp1b	87	58.048	ENSPSIG00000012885	LARP1B	99	57.968	Pelodiscus_sinensis
ENSATEG00000017849	larp1b	76	74.018	ENSPMGG00000007207	larp1b	91	75.858	Periophthalmus_magnuspinnatus
ENSATEG00000017849	larp1b	63	55.491	ENSPMAG00000002700	larp1b	98	48.849	Petromyzon_marinus
ENSATEG00000017849	larp1b	87	57.878	ENSPCIG00000026516	LARP1B	93	64.986	Phascolarctos_cinereus
ENSATEG00000017849	larp1b	100	77.807	ENSPFOG00000019519	larp1b	100	77.996	Poecilia_formosa
ENSATEG00000017849	larp1b	63	75.606	ENSPFOG00000022837	-	99	76.623	Poecilia_formosa
ENSATEG00000017849	larp1b	100	79.635	ENSPLAG00000007115	larp1b	100	79.743	Poecilia_latipinna
ENSATEG00000017849	larp1b	100	79.580	ENSPMEG00000001224	larp1b	100	79.693	Poecilia_mexicana
ENSATEG00000017849	larp1b	85	54.449	ENSPCAG00000007546	LARP1B	99	54.313	Procavia_capensis
ENSATEG00000017849	larp1b	76	60.000	ENSPCOG00000021874	LARP1B	98	63.571	Propithecus_coquereli
ENSATEG00000017849	larp1b	84	53.233	ENSPVAG00000005373	LARP1B	99	52.478	Pteropus_vampyrus
ENSATEG00000017849	larp1b	76	82.828	ENSPNYG00000017357	larp1b	100	83.333	Pundamilia_nyererei
ENSATEG00000017849	larp1b	94	61.312	ENSPNAG00000008823	larp1b	91	68.622	Pygocentrus_nattereri
ENSATEG00000017849	larp1b	50	50.738	ENSRBIG00000039982	-	99	49.081	Rhinopithecus_bieti
ENSATEG00000017849	larp1b	84	56.990	ENSRROG00000030771	LARP1B	99	56.443	Rhinopithecus_roxellana
ENSATEG00000017849	larp1b	62	53.571	ENSSHAG00000014474	LARP1B	99	52.874	Sarcophilus_harrisii
ENSATEG00000017849	larp1b	85	85.745	ENSSMAG00000006347	larp1b	99	83.350	Scophthalmus_maximus
ENSATEG00000017849	larp1b	100	86.596	ENSSDUG00000004182	larp1b	100	87.175	Seriola_dumerili
ENSATEG00000017849	larp1b	98	78.719	ENSSLDG00000014613	larp1b	99	85.169	Seriola_lalandi_dorsalis
ENSATEG00000017849	larp1b	82	56.920	ENSSPUG00000011837	LARP1B	96	56.134	Sphenodon_punctatus
ENSATEG00000017849	larp1b	100	84.749	ENSSPAG00000017772	larp1b	100	84.658	Stegastes_partitus
ENSATEG00000017849	larp1b	87	55.979	ENSSSCG00000034280	LARP1B	99	78.652	Sus_scrofa
ENSATEG00000017849	larp1b	79	59.174	ENSTGUG00000002098	-	97	58.824	Taeniopygia_guttata
ENSATEG00000017849	larp1b	99	78.426	ENSTRUG00000005612	larp1b	99	78.307	Takifugu_rubripes
ENSATEG00000017849	larp1b	90	75.803	ENSTNIG00000012398	larp1b	100	75.752	Tetraodon_nigroviridis
ENSATEG00000017849	larp1b	62	51.679	ENSTBEG00000004177	LARP1B	66	60.510	Tupaia_belangeri
ENSATEG00000017849	larp1b	77	55.581	ENSTTRG00000012984	LARP1B	91	55.882	Tursiops_truncatus
ENSATEG00000017849	larp1b	85	56.660	ENSUMAG00000007373	LARP1B	96	57.283	Ursus_maritimus
ENSATEG00000017849	larp1b	84	48.401	ENSVPAG00000007223	LARP1B	79	55.234	Vicugna_pacos
ENSATEG00000017849	larp1b	86	56.873	ENSVVUG00000011307	LARP1B	99	56.488	Vulpes_vulpes
ENSATEG00000017849	larp1b	89	51.496	ENSXETG00000022512	larp1b	93	51.290	Xenopus_tropicalis
ENSATEG00000017849	larp1b	89	71.446	ENSXCOG00000004435	larp1b	98	71.814	Xiphophorus_couchianus
ENSATEG00000017849	larp1b	100	78.799	ENSXMAG00000008150	larp1b	100	79.144	Xiphophorus_maculatus