EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000018006 (Gene tree)
Gene ID: 113172319
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 12079 bases
Position: chrOOHO01000003.1:7864575-7876653
Accession: 113172319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000025980	RRM_1	PF00076.22	1.3e-12	1	1
ENSATEP00000025965	RRM_1	PF00076.22	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000026384	-	5858	-	ENSATEP00000025965	321 (aa)	XP_026231028	UPI000E45F8FF
ENSATET00000026399	-	819	-	ENSATEP00000025980	272 (aa)	-	-

Gene Model

Click here to download ENSATEG00000018006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000018006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000018006	-	83	52.174	ENSATEG00000022219	-	77	50.800
ENSATEG00000018006	-	79	88.940	ENSATEG00000011734	-	85	82.625
ENSATEG00000018006	-	97	47.751	ENSATEG00000004870	raly	91	46.429
ENSATEG00000018006	-	79	59.031	ENSATEG00000023356	-	95	54.386

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000018006	-	95	50.763	ENSG00000184672	RALYL	93	77.215	Homo_sapiens
ENSATEG00000018006	-	78	92.453	ENSAPOG00000006963	hnrnpc	85	81.955	Acanthochromis_polyacanthus
ENSATEG00000018006	-	100	87.546	ENSACIG00000016568	-	89	91.176	Amphilophus_citrinellus
ENSATEG00000018006	-	80	88.584	ENSACIG00000000270	-	83	86.301	Amphilophus_citrinellus
ENSATEG00000018006	-	100	88.720	ENSAOCG00000021616	-	100	80.449	Amphiprion_ocellaris
ENSATEG00000018006	-	78	92.453	ENSAOCG00000003896	-	85	81.579	Amphiprion_ocellaris
ENSATEG00000018006	-	100	81.081	ENSAPEG00000019962	-	85	95.131	Amphiprion_percula
ENSATEG00000018006	-	78	92.453	ENSAPEG00000001489	-	85	81.579	Amphiprion_percula
ENSATEG00000018006	-	95	48.905	ENSAPLG00000015574	RALYL	84	50.602	Anas_platyrhynchos
ENSATEG00000018006	-	99	47.552	ENSACAG00000028464	RALYL	80	53.361	Anolis_carolinensis
ENSATEG00000018006	-	99	47.183	ENSANAG00000023383	RALYL	83	52.743	Aotus_nancymaae
ENSATEG00000018006	-	76	87.981	ENSACLG00000013636	-	87	80.075	Astatotilapia_calliptera
ENSATEG00000018006	-	79	97.209	ENSACLG00000005707	-	90	92.565	Astatotilapia_calliptera
ENSATEG00000018006	-	81	85.650	ENSACLG00000000995	-	83	85.650	Astatotilapia_calliptera
ENSATEG00000018006	-	70	80.729	ENSAMXG00000042946	hnrnpc	98	75.393	Astyanax_mexicanus
ENSATEG00000018006	-	89	79.424	ENSAMXG00000034915	zgc:55733	91	77.068	Astyanax_mexicanus
ENSATEG00000018006	-	99	47.183	ENSCJAG00000000402	RALYL	74	58.491	Callithrix_jacchus
ENSATEG00000018006	-	99	47.719	ENSCPOG00000012314	RALYL	74	56.561	Cavia_porcellus
ENSATEG00000018006	-	96	50.368	ENSCCAG00000025003	RALYL	77	77.215	Cebus_capucinus
ENSATEG00000018006	-	95	50.763	ENSCATG00000042145	RALYL	83	52.743	Cercocebus_atys
ENSATEG00000018006	-	95	48.175	ENSCLAG00000005228	RALYL	75	56.054	Chinchilla_lanigera
ENSATEG00000018006	-	77	54.425	ENSCHOG00000013228	RALYL	75	51.948	Choloepus_hoffmanni
ENSATEG00000018006	-	95	50.763	ENSCANG00000039144	RALYL	83	52.743	Colobus_angolensis_palliatus
ENSATEG00000018006	-	97	47.183	ENSCGRG00001009241	Ralyl	75	55.357	Cricetulus_griseus_chok1gshd
ENSATEG00000018006	-	80	93.119	ENSCSEG00000021349	-	82	86.842	Cynoglossus_semilaevis
ENSATEG00000018006	-	81	77.679	ENSCSEG00000019769	-	75	75.446	Cynoglossus_semilaevis
ENSATEG00000018006	-	83	91.011	ENSCVAG00000016981	-	81	91.011	Cyprinodon_variegatus
ENSATEG00000018006	-	85	67.509	ENSCVAG00000002797	-	86	66.923	Cyprinodon_variegatus
ENSATEG00000018006	-	79	88.785	ENSDARG00000103845	zgc:55733	93	76.336	Danio_rerio
ENSATEG00000018006	-	79	83.028	ENSDARG00000053810	hnrnpc	84	73.684	Danio_rerio
ENSATEG00000018006	-	95	49.091	ENSDORG00000003721	Ralyl	80	52.941	Dipodomys_ordii
ENSATEG00000018006	-	60	55.747	ENSETEG00000014028	RALYL	82	59.877	Echinops_telfairi
ENSATEG00000018006	-	76	50.235	ENSEBUG00000006049	RALYL	74	47.867	Eptatretus_burgeri
ENSATEG00000018006	-	93	43.396	ENSEBUG00000012363	hnrnpc	69	44.726	Eptatretus_burgeri
ENSATEG00000018006	-	99	47.018	ENSEEUG00000007202	RALYL	76	56.054	Erinaceus_europaeus
ENSATEG00000018006	-	79	83.478	ENSELUG00000007714	-	93	77.617	Esox_lucius
ENSATEG00000018006	-	96	78.457	ENSELUG00000004132	-	91	79.412	Esox_lucius
ENSATEG00000018006	-	95	47.810	ENSFALG00000008647	RALYL	97	57.944	Ficedula_albicollis
ENSATEG00000018006	-	80	88.412	ENSFHEG00000007278	-	82	86.347	Fundulus_heteroclitus
ENSATEG00000018006	-	94	72.932	ENSFHEG00000003605	-	86	76.404	Fundulus_heteroclitus
ENSATEG00000018006	-	76	59.624	ENSGALG00000036938	RALYL	83	50.602	Gallus_gallus
ENSATEG00000018006	-	100	82.918	ENSGAFG00000020992	-	85	89.394	Gambusia_affinis
ENSATEG00000018006	-	80	84.475	ENSGAFG00000020486	-	82	80.734	Gambusia_affinis
ENSATEG00000018006	-	80	76.037	ENSGACG00000018932	-	88	69.545	Gasterosteus_aculeatus
ENSATEG00000018006	-	100	80.363	ENSGACG00000017772	-	98	90.196	Gasterosteus_aculeatus
ENSATEG00000018006	-	95	50.763	ENSGGOG00000000841	RALYL	83	52.743	Gorilla_gorilla
ENSATEG00000018006	-	76	88.462	ENSHBUG00000018342	-	85	80.827	Haplochromis_burtoni
ENSATEG00000018006	-	100	88.037	ENSHBUG00000010527	-	84	92.193	Haplochromis_burtoni
ENSATEG00000018006	-	95	47.810	ENSHGLG00000004866	RALYL	75	55.605	Heterocephalus_glaber_female
ENSATEG00000018006	-	95	47.810	ENSHGLG00100017480	RALYL	75	55.605	Heterocephalus_glaber_male
ENSATEG00000018006	-	79	89.474	ENSHCOG00000012333	hnrnpc	91	86.022	Hippocampus_comes
ENSATEG00000018006	-	80	85.780	ENSIPUG00000008666	zgc:55733	95	80.184	Ictalurus_punctatus
ENSATEG00000018006	-	89	78.279	ENSIPUG00000011271	hnrnpc	98	79.736	Ictalurus_punctatus
ENSATEG00000018006	-	95	48.727	ENSSTOG00000012583	RALYL	81	52.521	Ictidomys_tridecemlineatus
ENSATEG00000018006	-	95	69.884	ENSKMAG00000011170	-	84	79.848	Kryptolebias_marmoratus
ENSATEG00000018006	-	100	84.472	ENSKMAG00000018265	-	83	92.135	Kryptolebias_marmoratus
ENSATEG00000018006	-	86	73.868	ENSLBEG00000024418	-	86	72.830	Labrus_bergylta
ENSATEG00000018006	-	78	85.915	ENSLBEG00000006979	-	85	76.494	Labrus_bergylta
ENSATEG00000018006	-	100	88.199	ENSLBEG00000006193	-	84	93.609	Labrus_bergylta
ENSATEG00000018006	-	82	71.111	ENSLOCG00000002560	hnrnpc	91	70.111	Lepisosteus_oculatus
ENSATEG00000018006	-	95	50.763	ENSMNEG00000033288	RALYL	83	52.743	Macaca_nemestrina
ENSATEG00000018006	-	95	50.763	ENSMLEG00000038284	RALYL	83	52.743	Mandrillus_leucophaeus
ENSATEG00000018006	-	79	89.352	ENSMAMG00000012236	-	84	83.083	Mastacembelus_armatus
ENSATEG00000018006	-	83	96.992	ENSMAMG00000008033	-	90	96.992	Mastacembelus_armatus
ENSATEG00000018006	-	100	88.344	ENSMZEG00005024249	-	84	92.565	Maylandia_zebra
ENSATEG00000018006	-	80	86.425	ENSMZEG00005020460	-	88	79.771	Maylandia_zebra
ENSATEG00000018006	-	97	47.183	ENSMAUG00000015149	Ralyl	75	55.357	Mesocricetus_auratus
ENSATEG00000018006	-	99	46.667	ENSMICG00000005558	RALYL	80	77.215	Microcebus_murinus
ENSATEG00000018006	-	97	47.183	ENSMOCG00000017371	Ralyl	75	54.911	Microtus_ochrogaster
ENSATEG00000018006	-	79	88.889	ENSMMOG00000021465	-	92	80.755	Mola_mola
ENSATEG00000018006	-	99	83.704	ENSMMOG00000019520	-	83	93.488	Mola_mola
ENSATEG00000018006	-	83	92.135	ENSMALG00000014623	-	84	92.509	Monopterus_albus
ENSATEG00000018006	-	99	69.858	ENSMALG00000007520	-	99	70.567	Monopterus_albus
ENSATEG00000018006	-	96	46.996	ENSMUSG00000039717	Ralyl	93	75.949	Mus_musculus
ENSATEG00000018006	-	77	56.637	ENSMPUG00000010724	RALYL	75	55.357	Mustela_putorius_furo
ENSATEG00000018006	-	97	47.535	ENSNGAG00000013375	Ralyl	80	52.101	Nannospalax_galili
ENSATEG00000018006	-	78	88.679	ENSNBRG00000004912	-	94	81.579	Neolamprologus_brichardi
ENSATEG00000018006	-	100	88.037	ENSNBRG00000015676	-	83	92.193	Neolamprologus_brichardi
ENSATEG00000018006	-	95	50.763	ENSNLEG00000002702	RALYL	79	52.743	Nomascus_leucogenys
ENSATEG00000018006	-	65	50.777	ENSOPRG00000013650	-	98	49.215	Ochotona_princeps
ENSATEG00000018006	-	95	47.810	ENSODEG00000001012	RALYL	75	55.605	Octodon_degus
ENSATEG00000018006	-	76	89.423	ENSONIG00000007859	-	93	81.752	Oreochromis_niloticus
ENSATEG00000018006	-	100	88.344	ENSONIG00000018350	-	84	92.565	Oreochromis_niloticus
ENSATEG00000018006	-	78	76.995	ENSORLG00000009999	-	85	70.896	Oryzias_latipes
ENSATEG00000018006	-	100	87.048	ENSORLG00000003144	-	82	90.146	Oryzias_latipes
ENSATEG00000018006	-	78	76.526	ENSORLG00020018228	hnrnpc	85	70.522	Oryzias_latipes_hni
ENSATEG00000018006	-	78	76.995	ENSORLG00015019755	-	85	70.896	Oryzias_latipes_hsok
ENSATEG00000018006	-	100	86.905	ENSORLG00015009460	-	82	90.146	Oryzias_latipes_hsok
ENSATEG00000018006	-	100	92.570	ENSOMEG00000022665	-	83	94.382	Oryzias_melastigma
ENSATEG00000018006	-	78	78.404	ENSOMEG00000020488	-	85	72.388	Oryzias_melastigma
ENSATEG00000018006	-	95	50.763	ENSPPAG00000038705	RALYL	83	52.743	Pan_paniscus
ENSATEG00000018006	-	99	49.306	ENSPPRG00000018612	RALYL	74	58.879	Panthera_pardus
ENSATEG00000018006	-	99	49.306	ENSPTIG00000020331	RALYL	74	58.879	Panthera_tigris_altaica
ENSATEG00000018006	-	95	50.763	ENSPTRG00000020381	RALYL	83	52.743	Pan_troglodytes
ENSATEG00000018006	-	95	50.763	ENSPANG00000029305	RALYL	83	52.743	Papio_anubis
ENSATEG00000018006	-	92	75.581	ENSPKIG00000008592	-	85	80.147	Paramormyrops_kingsleyae
ENSATEG00000018006	-	79	85.780	ENSPKIG00000022837	-	84	83.521	Paramormyrops_kingsleyae
ENSATEG00000018006	-	95	49.270	ENSPSIG00000011135	RALYL	79	52.743	Pelodiscus_sinensis
ENSATEG00000018006	-	83	73.894	ENSPMGG00000017774	-	96	63.636	Periophthalmus_magnuspinnatus
ENSATEG00000018006	-	99	83.395	ENSPMGG00000013144	-	89	84.874	Periophthalmus_magnuspinnatus
ENSATEG00000018006	-	97	47.183	ENSPEMG00000016447	Ralyl	75	55.357	Peromyscus_maniculatus_bairdii
ENSATEG00000018006	-	77	52.863	ENSPMAG00000002407	RALYL	97	52.000	Petromyzon_marinus
ENSATEG00000018006	-	100	86.239	ENSPFOG00000002643	-	84	90.000	Poecilia_formosa
ENSATEG00000018006	-	85	77.061	ENSPFOG00000001583	-	86	77.903	Poecilia_formosa
ENSATEG00000018006	-	100	86.544	ENSPLAG00000000061	-	82	91.353	Poecilia_latipinna
ENSATEG00000018006	-	76	83.732	ENSPLAG00000015305	-	86	75.472	Poecilia_latipinna
ENSATEG00000018006	-	94	73.208	ENSPMEG00000004802	-	86	77.903	Poecilia_mexicana
ENSATEG00000018006	-	100	85.627	ENSPMEG00000016524	-	82	90.602	Poecilia_mexicana
ENSATEG00000018006	-	83	91.353	ENSPREG00000001852	-	89	90.602	Poecilia_reticulata
ENSATEG00000018006	-	76	83.732	ENSPREG00000007928	-	86	76.779	Poecilia_reticulata
ENSATEG00000018006	-	95	42.857	ENSPPYG00000018710	-	75	72.115	Pongo_abelii
ENSATEG00000018006	-	99	46.667	ENSPVAG00000010821	RALYL	78	53.617	Pteropus_vampyrus
ENSATEG00000018006	-	78	89.151	ENSPNYG00000020293	-	87	81.154	Pundamilia_nyererei
ENSATEG00000018006	-	99	83.972	ENSPNYG00000003747	-	90	92.193	Pundamilia_nyererei
ENSATEG00000018006	-	79	84.332	ENSPNAG00000015686	hnrnpc	89	79.775	Pygocentrus_nattereri
ENSATEG00000018006	-	83	76.015	ENSPNAG00000019200	zgc:55733	86	76.015	Pygocentrus_nattereri
ENSATEG00000018006	-	95	50.763	ENSRROG00000023925	RALYL	82	75.309	Rhinopithecus_roxellana
ENSATEG00000018006	-	79	85.780	ENSSFOG00015012924	-	80	96.203	Scleropages_formosus
ENSATEG00000018006	-	96	72.524	ENSSFOG00015012015	-	83	85.185	Scleropages_formosus
ENSATEG00000018006	-	79	83.645	ENSSMAG00000013592	-	96	67.893	Scophthalmus_maximus
ENSATEG00000018006	-	100	86.810	ENSSMAG00000011147	-	100	88.957	Scophthalmus_maximus
ENSATEG00000018006	-	100	94.099	ENSSDUG00000006730	-	100	94.099	Seriola_dumerili
ENSATEG00000018006	-	95	76.154	ENSSDUG00000001723	-	85	83.083	Seriola_dumerili
ENSATEG00000018006	-	88	94.737	ENSSLDG00000007474	-	98	94.737	Seriola_lalandi_dorsalis
ENSATEG00000018006	-	78	89.151	ENSSLDG00000007454	-	86	82.707	Seriola_lalandi_dorsalis
ENSATEG00000018006	-	55	72.115	ENSSARG00000002374	RALYL	81	45.259	Sorex_araneus
ENSATEG00000018006	-	94	75.665	ENSSPAG00000023204	-	85	83.083	Stegastes_partitus
ENSATEG00000018006	-	100	90.343	ENSSPAG00000013996	-	84	97.368	Stegastes_partitus
ENSATEG00000018006	-	95	47.842	ENSTGUG00000011689	RALYL	80	54.506	Taeniopygia_guttata
ENSATEG00000018006	-	85	85.652	ENSTRUG00000020158	-	92	74.286	Takifugu_rubripes
ENSATEG00000018006	-	77	84.507	ENSTNIG00000007427	-	84	80.460	Tetraodon_nigroviridis
ENSATEG00000018006	-	79	82.028	ENSTNIG00000000334	-	94	78.707	Tetraodon_nigroviridis
ENSATEG00000018006	-	77	50.000	ENSTBEG00000005551	RALYL	87	50.450	Tupaia_belangeri
ENSATEG00000018006	-	77	52.402	ENSTTRG00000015762	RALYL	74	54.587	Tursiops_truncatus
ENSATEG00000018006	-	77	54.673	ENSVPAG00000008501	RALYL	74	54.976	Vicugna_pacos
ENSATEG00000018006	-	84	72.263	ENSXCOG00000006552	-	82	71.206	Xiphophorus_couchianus
ENSATEG00000018006	-	57	90.798	ENSXCOG00000019434	-	69	89.571	Xiphophorus_couchianus
ENSATEG00000018006	-	83	91.353	ENSXMAG00000022849	-	86	90.602	Xiphophorus_maculatus
ENSATEG00000018006	-	78	85.446	ENSXMAG00000009333	-	86	76.030	Xiphophorus_maculatus