EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000018400 (Gene tree)
Gene ID: 113162431
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 25881 bases
Position: chrOOHO01000002.1:12478131-12504011
Accession: 113162431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000026553	RRM_1	PF00076.22	8.2e-39	1	3
ENSATEP00000026553	RRM_1	PF00076.22	8.2e-39	2	3
ENSATEP00000026553	RRM_1	PF00076.22	8.2e-39	3	3
ENSATEP00000026548	RRM_1	PF00076.22	9e-39	1	3
ENSATEP00000026548	RRM_1	PF00076.22	9e-39	2	3
ENSATEP00000026548	RRM_1	PF00076.22	9e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000026972	-	4955	XM_026360554	ENSATEP00000026548	613 (aa)	XP_026216337	UPI000E459397
ENSATET00000026977	-	4931	XM_026360561	ENSATEP00000026553	605 (aa)	XP_026216346	UPI000E460163

Gene Model

Click here to download ENSATEG00000018400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000018400's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000018400	rbm47	76	52.652	ENSATEG00000013720	a1cf	91	51.906
ENSATEG00000018400	rbm47	50	54.426	ENSATEG00000008698	hnrnpr	68	45.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000018400	rbm47	94	85.028	ENSG00000163694	RBM47	100	82.564	Homo_sapiens
ENSATEG00000018400	rbm47	100	96.915	ENSAPOG00000011062	rbm47	100	96.915	Acanthochromis_polyacanthus
ENSATEG00000018400	rbm47	94	76.248	ENSAMEG00000009672	RBM47	100	75.772	Ailuropoda_melanoleuca
ENSATEG00000018400	rbm47	100	92.739	ENSACIG00000011531	rbm47	100	92.904	Amphilophus_citrinellus
ENSATEG00000018400	rbm47	100	97.172	ENSAOCG00000022245	rbm47	100	97.172	Amphiprion_ocellaris
ENSATEG00000018400	rbm47	100	97.172	ENSAPEG00000018304	rbm47	100	97.172	Amphiprion_percula
ENSATEG00000018400	rbm47	100	75.654	ENSAPLG00000013974	RBM47	100	75.817	Anas_platyrhynchos
ENSATEG00000018400	rbm47	100	74.715	ENSACAG00000011833	RBM47	100	75.896	Anolis_carolinensis
ENSATEG00000018400	rbm47	100	81.234	ENSANAG00000029440	RBM47	100	82.519	Aotus_nancymaae
ENSATEG00000018400	rbm47	100	95.090	ENSACLG00000016902	rbm47	100	95.090	Astatotilapia_calliptera
ENSATEG00000018400	rbm47	100	82.651	ENSAMXG00000021794	rbm47	100	82.815	Astyanax_mexicanus
ENSATEG00000018400	rbm47	100	75.777	ENSBTAG00000002356	RBM47	100	77.705	Bos_taurus
ENSATEG00000018400	rbm47	94	85.915	ENSCJAG00000019385	RBM47	100	82.519	Callithrix_jacchus
ENSATEG00000018400	rbm47	94	77.526	ENSCAFG00000015898	RBM47	100	76.557	Canis_familiaris
ENSATEG00000018400	rbm47	80	79.837	ENSCAFG00020010558	RBM47	94	80.720	Canis_lupus_dingo
ENSATEG00000018400	rbm47	100	75.777	ENSCHIG00000026214	RBM47	100	77.705	Capra_hircus
ENSATEG00000018400	rbm47	84	86.099	ENSTSYG00000033612	RBM47	93	84.956	Carlito_syrichta
ENSATEG00000018400	rbm47	100	71.429	ENSCAPG00000008426	RBM47	100	71.757	Cavia_aperea
ENSATEG00000018400	rbm47	100	80.563	ENSCPOG00000014100	RBM47	100	77.213	Cavia_porcellus
ENSATEG00000018400	rbm47	100	82.262	ENSCCAG00000030129	-	100	82.262	Cebus_capucinus
ENSATEG00000018400	rbm47	99	55.428	ENSCCAG00000024397	-	99	55.428	Cebus_capucinus
ENSATEG00000018400	rbm47	94	85.028	ENSCATG00000042064	RBM47	100	82.564	Cercocebus_atys
ENSATEG00000018400	rbm47	94	85.915	ENSCLAG00000001684	RBM47	100	77.907	Chinchilla_lanigera
ENSATEG00000018400	rbm47	94	77.163	ENSCSAG00000017060	RBM47	100	77.199	Chlorocebus_sabaeus
ENSATEG00000018400	rbm47	83	77.069	ENSCHOG00000011731	RBM47	88	75.764	Choloepus_hoffmanni
ENSATEG00000018400	rbm47	100	77.941	ENSCPBG00000013831	RBM47	100	78.793	Chrysemys_picta_bellii
ENSATEG00000018400	rbm47	94	86.236	ENSCANG00000019997	RBM47	100	82.564	Colobus_angolensis_palliatus
ENSATEG00000018400	rbm47	100	81.282	ENSCGRG00001000623	-	100	76.098	Cricetulus_griseus_chok1gshd
ENSATEG00000018400	rbm47	100	76.471	ENSCGRG00001020102	-	100	78.005	Cricetulus_griseus_chok1gshd
ENSATEG00000018400	rbm47	100	74.472	ENSCGRG00000007762	-	100	77.907	Cricetulus_griseus_crigri
ENSATEG00000018400	rbm47	100	76.215	ENSCGRG00000014760	-	100	77.749	Cricetulus_griseus_crigri
ENSATEG00000018400	rbm47	94	91.958	ENSCSEG00000004545	rbm47	100	88.962	Cynoglossus_semilaevis
ENSATEG00000018400	rbm47	100	91.269	ENSCVAG00000020144	rbm47	100	93.830	Cyprinodon_variegatus
ENSATEG00000018400	rbm47	100	83.087	ENSDARG00000061985	rbm47	100	84.072	Danio_rerio
ENSATEG00000018400	rbm47	94	78.223	ENSDNOG00000046854	RBM47	100	77.138	Dasypus_novemcinctus
ENSATEG00000018400	rbm47	100	75.162	ENSDORG00000010144	Rbm47	100	76.786	Dipodomys_ordii
ENSATEG00000018400	rbm47	94	77.414	ENSETEG00000009194	RBM47	100	76.384	Echinops_telfairi
ENSATEG00000018400	rbm47	93	59.828	ENSEBUG00000011912	rbm47	95	60.243	Eptatretus_burgeri
ENSATEG00000018400	rbm47	94	78.472	ENSEASG00005008443	RBM47	100	77.377	Equus_asinus_asinus
ENSATEG00000018400	rbm47	94	78.472	ENSECAG00000004400	RBM47	100	77.377	Equus_caballus
ENSATEG00000018400	rbm47	70	89.048	ENSEEUG00000001194	RBM47	75	81.967	Erinaceus_europaeus
ENSATEG00000018400	rbm47	100	89.141	ENSELUG00000006148	rbm47	100	89.340	Esox_lucius
ENSATEG00000018400	rbm47	94	78.397	ENSFCAG00000012399	RBM47	100	77.632	Felis_catus
ENSATEG00000018400	rbm47	100	77.451	ENSFALG00000002861	RBM47	100	78.431	Ficedula_albicollis
ENSATEG00000018400	rbm47	100	79.949	ENSFDAG00000016326	RBM47	100	79.949	Fukomys_damarensis
ENSATEG00000018400	rbm47	100	91.028	ENSFHEG00000007938	rbm47	100	90.865	Fundulus_heteroclitus
ENSATEG00000018400	rbm47	100	84.142	ENSGMOG00000014802	rbm47	100	84.142	Gadus_morhua
ENSATEG00000018400	rbm47	64	83.590	ENSGALG00000014267	RBM47	100	83.632	Gallus_gallus
ENSATEG00000018400	rbm47	64	89.406	ENSGAFG00000020571	rbm47	98	89.433	Gambusia_affinis
ENSATEG00000018400	rbm47	100	91.269	ENSGACG00000016223	rbm47	100	92.802	Gasterosteus_aculeatus
ENSATEG00000018400	rbm47	100	78.431	ENSGAGG00000020051	RBM47	100	79.282	Gopherus_agassizii
ENSATEG00000018400	rbm47	94	85.028	ENSGGOG00000001367	RBM47	100	82.564	Gorilla_gorilla
ENSATEG00000018400	rbm47	100	93.548	ENSHBUG00000003520	rbm47	100	95.090	Haplochromis_burtoni
ENSATEG00000018400	rbm47	84	63.333	ENSHGLG00000016914	RBM47	100	76.744	Heterocephalus_glaber_female
ENSATEG00000018400	rbm47	100	80.977	ENSHGLG00100014028	-	100	76.744	Heterocephalus_glaber_male
ENSATEG00000018400	rbm47	100	68.801	ENSHGLG00100003071	-	100	68.637	Heterocephalus_glaber_male
ENSATEG00000018400	rbm47	99	95.373	ENSHCOG00000002074	rbm47	99	95.373	Hippocampus_comes
ENSATEG00000018400	rbm47	100	84.236	ENSIPUG00000004743	rbm47	100	84.893	Ictalurus_punctatus
ENSATEG00000018400	rbm47	94	83.754	ENSSTOG00000004727	RBM47	100	81.748	Ictidomys_tridecemlineatus
ENSATEG00000018400	rbm47	94	77.547	ENSJJAG00000013823	Rbm47	100	76.020	Jaculus_jaculus
ENSATEG00000018400	rbm47	100	91.475	ENSKMAG00000000084	rbm47	100	93.590	Kryptolebias_marmoratus
ENSATEG00000018400	rbm47	100	92.422	ENSLBEG00000008436	rbm47	100	93.199	Labrus_bergylta
ENSATEG00000018400	rbm47	94	80.522	ENSLACG00000007196	RBM47	100	78.197	Latimeria_chalumnae
ENSATEG00000018400	rbm47	94	85.166	ENSLOCG00000012966	rbm47	95	82.237	Lepisosteus_oculatus
ENSATEG00000018400	rbm47	100	74.959	ENSLAFG00000011998	RBM47	100	76.634	Loxodonta_africana
ENSATEG00000018400	rbm47	94	85.028	ENSMFAG00000037967	RBM47	100	82.564	Macaca_fascicularis
ENSATEG00000018400	rbm47	94	77.163	ENSMMUG00000012036	RBM47	100	78.744	Macaca_mulatta
ENSATEG00000018400	rbm47	94	84.746	ENSMNEG00000040774	RBM47	100	82.564	Macaca_nemestrina
ENSATEG00000018400	rbm47	94	87.415	ENSMLEG00000041432	RBM47	100	82.371	Mandrillus_leucophaeus
ENSATEG00000018400	rbm47	100	94.959	ENSMAMG00000019143	rbm47	100	96.401	Mastacembelus_armatus
ENSATEG00000018400	rbm47	100	95.090	ENSMZEG00005023659	rbm47	99	95.090	Maylandia_zebra
ENSATEG00000018400	rbm47	100	77.362	ENSMGAG00000012226	RBM47	100	78.211	Meleagris_gallopavo
ENSATEG00000018400	rbm47	100	80.818	ENSMAUG00000006493	Rbm47	100	82.097	Mesocricetus_auratus
ENSATEG00000018400	rbm47	94	82.621	ENSMICG00000026417	RBM47	100	79.949	Microcebus_murinus
ENSATEG00000018400	rbm47	100	81.026	ENSMOCG00000021170	Rbm47	100	82.051	Microtus_ochrogaster
ENSATEG00000018400	rbm47	100	94.050	ENSMMOG00000007260	rbm47	100	94.050	Mola_mola
ENSATEG00000018400	rbm47	51	78.165	ENSMODG00000015426	-	98	78.165	Monodelphis_domestica
ENSATEG00000018400	rbm47	100	77.578	ENSMODG00000007003	RBM47	100	78.232	Monodelphis_domestica
ENSATEG00000018400	rbm47	100	72.817	ENSMODG00000020561	-	100	72.982	Monodelphis_domestica
ENSATEG00000018400	rbm47	100	94.617	ENSMALG00000005167	rbm47	100	96.124	Monopterus_albus
ENSATEG00000018400	rbm47	100	81.026	MGP_CAROLIEiJ_G0027258	Rbm47	100	82.308	Mus_caroli
ENSATEG00000018400	rbm47	100	80.769	ENSMUSG00000070780	Rbm47	100	82.051	Mus_musculus
ENSATEG00000018400	rbm47	100	81.282	MGP_PahariEiJ_G0017040	Rbm47	100	82.564	Mus_pahari
ENSATEG00000018400	rbm47	100	80.769	MGP_SPRETEiJ_G0028253	Rbm47	100	82.051	Mus_spretus
ENSATEG00000018400	rbm47	94	76.990	ENSMPUG00000006177	RBM47	94	76.144	Mustela_putorius_furo
ENSATEG00000018400	rbm47	100	75.902	ENSMLUG00000000889	RBM47	100	76.885	Myotis_lucifugus
ENSATEG00000018400	rbm47	100	74.756	ENSNGAG00000003325	Rbm47	100	76.059	Nannospalax_galili
ENSATEG00000018400	rbm47	100	94.108	ENSNBRG00000015092	rbm47	100	94.108	Neolamprologus_brichardi
ENSATEG00000018400	rbm47	94	85.028	ENSNLEG00000017151	RBM47	100	82.564	Nomascus_leucogenys
ENSATEG00000018400	rbm47	70	80.896	ENSMEUG00000009516	-	99	80.896	Notamacropus_eugenii
ENSATEG00000018400	rbm47	76	85.892	ENSOPRG00000016507	-	75	85.892	Ochotona_princeps
ENSATEG00000018400	rbm47	94	77.739	ENSODEG00000004873	RBM47	100	77.011	Octodon_degus
ENSATEG00000018400	rbm47	100	93.421	ENSONIG00000009061	rbm47	100	93.421	Oreochromis_niloticus
ENSATEG00000018400	rbm47	100	76.112	ENSOANG00000008978	RBM47	100	77.924	Ornithorhynchus_anatinus
ENSATEG00000018400	rbm47	100	75.246	ENSOCUG00000012034	RBM47	100	77.176	Oryctolagus_cuniculus
ENSATEG00000018400	rbm47	100	91.419	ENSORLG00000005847	rbm47	100	93.814	Oryzias_latipes
ENSATEG00000018400	rbm47	100	91.584	ENSORLG00020005154	rbm47	100	93.814	Oryzias_latipes_hni
ENSATEG00000018400	rbm47	100	91.419	ENSORLG00015000066	rbm47	100	94.072	Oryzias_latipes_hsok
ENSATEG00000018400	rbm47	100	91.405	ENSOMEG00000010730	rbm47	100	91.240	Oryzias_melastigma
ENSATEG00000018400	rbm47	94	71.951	ENSOGAG00000025193	-	100	70.888	Otolemur_garnettii
ENSATEG00000018400	rbm47	94	77.163	ENSOGAG00000029367	-	100	76.307	Otolemur_garnettii
ENSATEG00000018400	rbm47	100	68.085	ENSOARG00000012711	RBM47	100	70.000	Ovis_aries
ENSATEG00000018400	rbm47	94	77.972	ENSPPAG00000029763	RBM47	100	77.796	Pan_paniscus
ENSATEG00000018400	rbm47	94	84.401	ENSPPRG00000012873	RBM47	100	81.234	Panthera_pardus
ENSATEG00000018400	rbm47	83	76.389	ENSPTIG00000017046	RBM47	100	77.183	Panthera_tigris_altaica
ENSATEG00000018400	rbm47	94	85.028	ENSPTRG00000016006	RBM47	100	82.564	Pan_troglodytes
ENSATEG00000018400	rbm47	94	85.028	ENSPANG00000005980	RBM47	100	82.564	Papio_anubis
ENSATEG00000018400	rbm47	95	87.744	ENSPKIG00000005037	rbm47	100	78.947	Paramormyrops_kingsleyae
ENSATEG00000018400	rbm47	100	84.238	ENSPKIG00000013431	RBM47	98	84.238	Paramormyrops_kingsleyae
ENSATEG00000018400	rbm47	89	78.821	ENSPSIG00000017516	RBM47	97	79.006	Pelodiscus_sinensis
ENSATEG00000018400	rbm47	94	93.310	ENSPMGG00000018540	rbm47	100	89.421	Periophthalmus_magnuspinnatus
ENSATEG00000018400	rbm47	100	80.769	ENSPEMG00000011088	Rbm47	100	82.051	Peromyscus_maniculatus_bairdii
ENSATEG00000018400	rbm47	100	89.379	ENSPFOG00000007997	rbm47	100	89.379	Poecilia_formosa
ENSATEG00000018400	rbm47	100	89.362	ENSPLAG00000002072	rbm47	100	89.362	Poecilia_latipinna
ENSATEG00000018400	rbm47	100	89.839	ENSPMEG00000017492	rbm47	100	91.517	Poecilia_mexicana
ENSATEG00000018400	rbm47	100	89.661	ENSPREG00000008456	rbm47	100	91.774	Poecilia_reticulata
ENSATEG00000018400	rbm47	94	68.268	ENSPPYG00000014688	RBM47	98	69.573	Pongo_abelii
ENSATEG00000018400	rbm47	82	79.710	ENSPCAG00000011879	RBM47	81	82.367	Procavia_capensis
ENSATEG00000018400	rbm47	94	84.986	ENSPCOG00000023451	RBM47	100	80.977	Propithecus_coquereli
ENSATEG00000018400	rbm47	94	77.029	ENSPVAG00000003812	RBM47	100	76.672	Pteropus_vampyrus
ENSATEG00000018400	rbm47	100	93.312	ENSPNYG00000022868	rbm47	100	93.312	Pundamilia_nyererei
ENSATEG00000018400	rbm47	100	83.797	ENSPNAG00000007940	rbm47	100	84.615	Pygocentrus_nattereri
ENSATEG00000018400	rbm47	100	75.163	ENSRNOG00000002408	Rbm47	100	77.124	Rattus_norvegicus
ENSATEG00000018400	rbm47	94	86.236	ENSRBIG00000039601	RBM47	100	82.564	Rhinopithecus_bieti
ENSATEG00000018400	rbm47	94	86.236	ENSRROG00000044696	RBM47	100	82.564	Rhinopithecus_roxellana
ENSATEG00000018400	rbm47	100	73.806	ENSSBOG00000028475	RBM47	100	79.960	Saimiri_boliviensis_boliviensis
ENSATEG00000018400	rbm47	100	77.176	ENSSHAG00000017576	RBM47	100	78.325	Sarcophilus_harrisii
ENSATEG00000018400	rbm47	98	79.933	ENSSFOG00015024101	RBM47	99	79.933	Scleropages_formosus
ENSATEG00000018400	rbm47	100	79.077	ENSSFOG00015012445	rbm47	100	79.572	Scleropages_formosus
ENSATEG00000018400	rbm47	100	93.638	ENSSMAG00000009744	rbm47	100	94.937	Scophthalmus_maximus
ENSATEG00000018400	rbm47	100	95.315	ENSSDUG00000022684	rbm47	100	95.315	Seriola_dumerili
ENSATEG00000018400	rbm47	100	94.830	ENSSLDG00000003109	rbm47	100	94.830	Seriola_lalandi_dorsalis
ENSATEG00000018400	rbm47	85	77.754	ENSSARG00000001735	RBM47	84	80.130	Sorex_araneus
ENSATEG00000018400	rbm47	100	82.308	ENSSPUG00000007515	RBM47	100	82.308	Sphenodon_punctatus
ENSATEG00000018400	rbm47	100	97.172	ENSSPAG00000001257	rbm47	100	97.172	Stegastes_partitus
ENSATEG00000018400	rbm47	94	84.916	ENSSSCG00000008796	RBM47	100	77.213	Sus_scrofa
ENSATEG00000018400	rbm47	100	76.923	ENSTGUG00000008705	RBM47	100	77.905	Taeniopygia_guttata
ENSATEG00000018400	rbm47	100	89.091	ENSTRUG00000014050	rbm47	100	88.926	Takifugu_rubripes
ENSATEG00000018400	rbm47	100	91.736	ENSTNIG00000006127	rbm47	100	91.570	Tetraodon_nigroviridis
ENSATEG00000018400	rbm47	72	83.051	ENSTBEG00000001607	RBM47	76	79.434	Tupaia_belangeri
ENSATEG00000018400	rbm47	94	79.443	ENSTTRG00000002839	RBM47	100	77.632	Tursiops_truncatus
ENSATEG00000018400	rbm47	94	77.855	ENSUAMG00000021346	RBM47	100	76.471	Ursus_americanus
ENSATEG00000018400	rbm47	52	84.921	ENSVPAG00000000641	-	56	74.214	Vicugna_pacos
ENSATEG00000018400	rbm47	94	77.875	ENSVVUG00000014774	RBM47	100	76.683	Vulpes_vulpes
ENSATEG00000018400	rbm47	100	75.980	ENSXETG00000012802	rbm47	100	76.307	Xenopus_tropicalis
ENSATEG00000018400	rbm47	100	89.406	ENSXCOG00000000780	rbm47	100	89.406	Xiphophorus_couchianus
ENSATEG00000018400	rbm47	100	92.443	ENSXMAG00000009874	rbm47	100	92.443	Xiphophorus_maculatus