EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000018475 (Gene tree)
Gene ID: 113164858
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 148962 bases
Position: chrOOHO01000004.1:44503347-44652308
Accession: ZDB-GENE-030131-3124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000026784	TUDOR	PF00567.24	6.2e-26	1	1
ENSATEP00000026784	SNase	PF00565.17	2.8e-64	1	4
ENSATEP00000026784	SNase	PF00565.17	2.8e-64	2	4
ENSATEP00000026784	SNase	PF00565.17	2.8e-64	3	4
ENSATEP00000026784	SNase	PF00565.17	2.8e-64	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000027210	-	5790	-	ENSATEP00000026784	1001 (aa)	-	-

Gene Model

Click here to download ENSATEG00000018475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000018475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000018475	snd1	88	84.036	ENSG00000197157	SND1	98	82.793	Homo_sapiens
ENSATEG00000018475	snd1	89	96.309	ENSAPOG00000017599	snd1	98	96.309	Acanthochromis_polyacanthus
ENSATEG00000018475	snd1	89	82.943	ENSAMEG00000004664	SND1	93	82.943	Ailuropoda_melanoleuca
ENSATEG00000018475	snd1	89	92.394	ENSACIG00000003551	snd1	98	92.394	Amphilophus_citrinellus
ENSATEG00000018475	snd1	89	96.309	ENSAOCG00000014166	snd1	98	96.309	Amphiprion_ocellaris
ENSATEG00000018475	snd1	89	96.309	ENSAPEG00000007067	snd1	98	96.309	Amphiprion_percula
ENSATEG00000018475	snd1	88	84.151	ENSANAG00000034463	SND1	97	84.120	Aotus_nancymaae
ENSATEG00000018475	snd1	89	94.407	ENSACLG00000022897	snd1	98	94.407	Astatotilapia_calliptera
ENSATEG00000018475	snd1	89	89.362	ENSAMXG00000016318	snd1	98	89.362	Astyanax_mexicanus
ENSATEG00000018475	snd1	88	84.379	ENSBTAG00000010692	SND1	98	83.128	Bos_taurus
ENSATEG00000018475	snd1	89	46.179	WBGene00006626	tsn-1	98	46.507	Caenorhabditis_elegans
ENSATEG00000018475	snd1	88	83.922	ENSCJAG00000017668	SND1	97	83.890	Callithrix_jacchus
ENSATEG00000018475	snd1	89	83.128	ENSCAFG00000001700	SND1	98	83.128	Canis_familiaris
ENSATEG00000018475	snd1	89	83.128	ENSCAFG00020021639	SND1	98	83.128	Canis_lupus_dingo
ENSATEG00000018475	snd1	88	84.265	ENSCHIG00000023390	SND1	98	83.017	Capra_hircus
ENSATEG00000018475	snd1	64	87.719	ENSTSYG00000004979	SND1	96	87.719	Carlito_syrichta
ENSATEG00000018475	snd1	87	73.938	ENSCAPG00000010677	SND1	95	73.938	Cavia_aperea
ENSATEG00000018475	snd1	88	84.036	ENSCPOG00000006251	SND1	98	82.793	Cavia_porcellus
ENSATEG00000018475	snd1	88	84.151	ENSCCAG00000036847	SND1	98	82.905	Cebus_capucinus
ENSATEG00000018475	snd1	88	84.265	ENSCATG00000035214	SND1	98	84.235	Cercocebus_atys
ENSATEG00000018475	snd1	88	84.265	ENSCLAG00000011796	SND1	98	85.570	Chinchilla_lanigera
ENSATEG00000018475	snd1	88	84.265	ENSCSAG00000010182	SND1	98	83.017	Chlorocebus_sabaeus
ENSATEG00000018475	snd1	71	77.228	ENSCHOG00000002218	SND1	86	77.228	Choloepus_hoffmanni
ENSATEG00000018475	snd1	89	83.333	ENSCPBG00000018094	SND1	98	83.333	Chrysemys_picta_bellii
ENSATEG00000018475	snd1	87	56.321	ENSCING00000000524	-	98	55.801	Ciona_intestinalis
ENSATEG00000018475	snd1	89	56.396	ENSCSAVG00000008807	-	98	56.396	Ciona_savignyi
ENSATEG00000018475	snd1	88	84.265	ENSCANG00000035119	SND1	98	83.017	Colobus_angolensis_palliatus
ENSATEG00000018475	snd1	88	83.808	ENSCGRG00001022514	Snd1	98	85.403	Cricetulus_griseus_chok1gshd
ENSATEG00000018475	snd1	87	83.774	ENSCGRG00000012277	Snd1	98	83.774	Cricetulus_griseus_crigri
ENSATEG00000018475	snd1	89	93.512	ENSCSEG00000008661	snd1	99	93.829	Cynoglossus_semilaevis
ENSATEG00000018475	snd1	89	95.302	ENSCVAG00000010316	snd1	98	95.302	Cyprinodon_variegatus
ENSATEG00000018475	snd1	89	89.062	ENSDARG00000006766	snd1	99	91.228	Danio_rerio
ENSATEG00000018475	snd1	87	81.995	ENSDNOG00000006795	SND1	98	81.995	Dasypus_novemcinctus
ENSATEG00000018475	snd1	88	84.036	ENSDORG00000000336	Snd1	98	82.793	Dipodomys_ordii
ENSATEG00000018475	snd1	88	50.000	FBgn0035121	Tudor-SN	98	49.457	Drosophila_melanogaster
ENSATEG00000018475	snd1	78	66.880	ENSETEG00000000375	SND1	88	66.880	Echinops_telfairi
ENSATEG00000018475	snd1	55	65.000	ENSEBUG00000014201	-	84	76.630	Eptatretus_burgeri
ENSATEG00000018475	snd1	88	84.361	ENSEASG00005008513	SND1	98	81.648	Equus_asinus_asinus
ENSATEG00000018475	snd1	88	84.036	ENSECAG00000011451	SND1	98	82.793	Equus_caballus
ENSATEG00000018475	snd1	86	77.040	ENSEEUG00000014737	SND1	96	75.858	Erinaceus_europaeus
ENSATEG00000018475	snd1	89	88.939	ENSELUG00000001805	snd1	95	88.939	Esox_lucius
ENSATEG00000018475	snd1	89	83.017	ENSFCAG00000008289	SND1	98	83.017	Felis_catus
ENSATEG00000018475	snd1	88	83.808	ENSFDAG00000015881	SND1	98	82.570	Fukomys_damarensis
ENSATEG00000018475	snd1	87	94.971	ENSFHEG00000004093	snd1	99	94.971	Fundulus_heteroclitus
ENSATEG00000018475	snd1	66	82.196	ENSGMOG00000018932	snd1	64	82.196	Gadus_morhua
ENSATEG00000018475	snd1	89	95.638	ENSGAFG00000008421	snd1	98	96.092	Gambusia_affinis
ENSATEG00000018475	snd1	89	59.735	ENSGACG00000019793	snd1	98	59.735	Gasterosteus_aculeatus
ENSATEG00000018475	snd1	88	84.265	ENSGGOG00000009614	SND1	97	84.235	Gorilla_gorilla
ENSATEG00000018475	snd1	89	94.519	ENSHBUG00000019135	snd1	98	94.519	Haplochromis_burtoni
ENSATEG00000018475	snd1	88	83.808	ENSHGLG00000003618	SND1	98	85.403	Heterocephalus_glaber_female
ENSATEG00000018475	snd1	88	83.808	ENSHGLG00100012449	SND1	97	83.808	Heterocephalus_glaber_male
ENSATEG00000018475	snd1	89	91.834	ENSHCOG00000005266	snd1	98	91.834	Hippocampus_comes
ENSATEG00000018475	snd1	89	88.702	ENSIPUG00000013279	snd1	98	88.702	Ictalurus_punctatus
ENSATEG00000018475	snd1	88	84.036	ENSSTOG00000002140	SND1	98	82.793	Ictidomys_tridecemlineatus
ENSATEG00000018475	snd1	88	84.151	ENSJJAG00000009561	Snd1	98	82.905	Jaculus_jaculus
ENSATEG00000018475	snd1	89	95.749	ENSKMAG00000016997	snd1	98	95.749	Kryptolebias_marmoratus
ENSATEG00000018475	snd1	89	95.966	ENSLBEG00000013563	snd1	98	93.501	Labrus_bergylta
ENSATEG00000018475	snd1	88	88.162	ENSLOCG00000015537	snd1	98	87.251	Lepisosteus_oculatus
ENSATEG00000018475	snd1	89	83.128	ENSLAFG00000009696	SND1	98	83.128	Loxodonta_africana
ENSATEG00000018475	snd1	88	84.265	ENSMFAG00000038114	SND1	98	84.235	Macaca_fascicularis
ENSATEG00000018475	snd1	88	84.265	ENSMMUG00000015432	SND1	97	85.835	Macaca_mulatta
ENSATEG00000018475	snd1	88	84.265	ENSMNEG00000039808	SND1	97	87.831	Macaca_nemestrina
ENSATEG00000018475	snd1	88	84.151	ENSMLEG00000029040	SND1	97	87.831	Mandrillus_leucophaeus
ENSATEG00000018475	snd1	90	95.759	ENSMAMG00000011739	snd1	98	95.759	Mastacembelus_armatus
ENSATEG00000018475	snd1	89	94.407	ENSMZEG00005005681	snd1	98	94.527	Maylandia_zebra
ENSATEG00000018475	snd1	88	84.151	ENSMICG00000000097	SND1	98	82.905	Microcebus_murinus
ENSATEG00000018475	snd1	88	84.379	ENSMOCG00000005040	Snd1	98	83.128	Microtus_ochrogaster
ENSATEG00000018475	snd1	89	94.966	ENSMMOG00000001795	snd1	98	94.966	Mola_mola
ENSATEG00000018475	snd1	88	83.580	ENSMODG00000015182	SND1	98	82.235	Monodelphis_domestica
ENSATEG00000018475	snd1	89	94.743	ENSMALG00000012071	snd1	98	95.108	Monopterus_albus
ENSATEG00000018475	snd1	88	83.922	MGP_CAROLIEiJ_G0028159	Snd1	99	85.210	Mus_caroli
ENSATEG00000018475	snd1	88	83.694	ENSMUSG00000001424	Snd1	99	83.553	Mus_musculus
ENSATEG00000018475	snd1	88	83.922	MGP_PahariEiJ_G0021917	Snd1	100	85.210	Mus_pahari
ENSATEG00000018475	snd1	88	83.922	MGP_SPRETEiJ_G0029159	Snd1	99	83.882	Mus_spretus
ENSATEG00000018475	snd1	89	82.905	ENSMPUG00000006545	SND1	98	82.905	Mustela_putorius_furo
ENSATEG00000018475	snd1	87	82.955	ENSMLUG00000017130	SND1	98	82.955	Myotis_lucifugus
ENSATEG00000018475	snd1	88	84.036	ENSNGAG00000011186	Snd1	98	82.793	Nannospalax_galili
ENSATEG00000018475	snd1	90	94.352	ENSNBRG00000006681	snd1	98	94.631	Neolamprologus_brichardi
ENSATEG00000018475	snd1	89	83.017	ENSNLEG00000012263	SND1	96	87.868	Nomascus_leucogenys
ENSATEG00000018475	snd1	79	76.456	ENSOPRG00000013405	SND1	88	75.248	Ochotona_princeps
ENSATEG00000018475	snd1	88	84.265	ENSODEG00000011502	SND1	98	82.998	Octodon_degus
ENSATEG00000018475	snd1	89	94.631	ENSONIG00000011481	snd1	96	94.631	Oreochromis_niloticus
ENSATEG00000018475	snd1	87	83.391	ENSOANG00000000817	SND1	96	83.391	Ornithorhynchus_anatinus
ENSATEG00000018475	snd1	89	82.235	ENSOCUG00000001620	SND1	98	82.235	Oryctolagus_cuniculus
ENSATEG00000018475	snd1	89	94.494	ENSORLG00000015201	snd1	100	94.190	Oryzias_latipes
ENSATEG00000018475	snd1	89	94.719	ENSORLG00020013991	snd1	99	94.719	Oryzias_latipes_hni
ENSATEG00000018475	snd1	89	94.295	ENSORLG00015012436	snd1	98	94.295	Oryzias_latipes_hsok
ENSATEG00000018475	snd1	89	93.736	ENSOMEG00000006406	snd1	98	93.736	Oryzias_melastigma
ENSATEG00000018475	snd1	88	84.073	ENSOGAG00000013356	SND1	93	82.832	Otolemur_garnettii
ENSATEG00000018475	snd1	87	81.839	ENSOARG00000002149	SND1	98	81.839	Ovis_aries
ENSATEG00000018475	snd1	88	84.151	ENSPPAG00000042947	SND1	97	84.120	Pan_paniscus
ENSATEG00000018475	snd1	89	83.017	ENSPPRG00000004494	SND1	98	83.017	Panthera_pardus
ENSATEG00000018475	snd1	89	83.110	ENSPTIG00000014214	SND1	99	83.110	Panthera_tigris_altaica
ENSATEG00000018475	snd1	88	84.151	ENSPTRG00000023911	SND1	97	84.120	Pan_troglodytes
ENSATEG00000018475	snd1	87	84.235	ENSPANG00000011997	SND1	98	84.235	Papio_anubis
ENSATEG00000018475	snd1	88	86.292	ENSPKIG00000023494	snd1	98	85.889	Paramormyrops_kingsleyae
ENSATEG00000018475	snd1	84	94.617	ENSPMGG00000003629	snd1	100	94.617	Periophthalmus_magnuspinnatus
ENSATEG00000018475	snd1	88	84.151	ENSPEMG00000010240	Snd1	98	82.905	Peromyscus_maniculatus_bairdii
ENSATEG00000018475	snd1	87	74.032	ENSPMAG00000007915	-	99	74.032	Petromyzon_marinus
ENSATEG00000018475	snd1	90	82.398	ENSPCIG00000011561	SND1	98	82.793	Phascolarctos_cinereus
ENSATEG00000018475	snd1	89	95.190	ENSPFOG00000001557	snd1	98	95.190	Poecilia_formosa
ENSATEG00000018475	snd1	89	95.190	ENSPLAG00000018459	snd1	95	95.190	Poecilia_latipinna
ENSATEG00000018475	snd1	89	95.414	ENSPMEG00000006803	snd1	98	95.414	Poecilia_mexicana
ENSATEG00000018475	snd1	89	95.190	ENSPREG00000002189	snd1	98	95.190	Poecilia_reticulata
ENSATEG00000018475	snd1	79	85.443	ENSPPYG00000017972	SND1	96	84.035	Pongo_abelii
ENSATEG00000018475	snd1	88	74.002	ENSPCAG00000011305	SND1	98	72.900	Procavia_capensis
ENSATEG00000018475	snd1	88	84.265	ENSPCOG00000026791	SND1	98	84.253	Propithecus_coquereli
ENSATEG00000018475	snd1	88	81.984	ENSPVAG00000013945	SND1	98	80.782	Pteropus_vampyrus
ENSATEG00000018475	snd1	89	94.295	ENSPNYG00000000932	snd1	98	94.295	Pundamilia_nyererei
ENSATEG00000018475	snd1	89	90.258	ENSPNAG00000001206	snd1	98	90.258	Pygocentrus_nattereri
ENSATEG00000018475	snd1	88	83.808	ENSRNOG00000031173	Snd1	98	82.874	Rattus_norvegicus
ENSATEG00000018475	snd1	63	88.258	ENSRBIG00000027782	-	93	88.258	Rhinopithecus_bieti
ENSATEG00000018475	snd1	88	84.265	ENSRROG00000033020	SND1	98	83.017	Rhinopithecus_roxellana
ENSATEG00000018475	snd1	88	84.036	ENSSBOG00000032461	SND1	96	85.739	Saimiri_boliviensis_boliviensis
ENSATEG00000018475	snd1	87	80.641	ENSSHAG00000015359	SND1	98	80.641	Sarcophilus_harrisii
ENSATEG00000018475	snd1	88	88.362	ENSSFOG00015001103	snd1	98	87.680	Scleropages_formosus
ENSATEG00000018475	snd1	89	94.295	ENSSMAG00000001932	snd1	93	94.295	Scophthalmus_maximus
ENSATEG00000018475	snd1	89	96.085	ENSSDUG00000002699	snd1	92	96.085	Seriola_dumerili
ENSATEG00000018475	snd1	89	88.479	ENSSLDG00000001950	snd1	98	88.479	Seriola_lalandi_dorsalis
ENSATEG00000018475	snd1	78	80.118	ENSSARG00000004877	SND1	92	80.118	Sorex_araneus
ENSATEG00000018475	snd1	64	80.936	ENSSPUG00000017586	SND1	96	80.936	Sphenodon_punctatus
ENSATEG00000018475	snd1	66	96.108	ENSSPAG00000021398	snd1	99	96.108	Stegastes_partitus
ENSATEG00000018475	snd1	88	84.036	ENSSSCG00000016590	SND1	98	82.793	Sus_scrofa
ENSATEG00000018475	snd1	89	92.573	ENSTRUG00000014067	snd1	98	91.834	Takifugu_rubripes
ENSATEG00000018475	snd1	89	92.170	ENSTNIG00000011019	snd1	98	93.792	Tetraodon_nigroviridis
ENSATEG00000018475	snd1	85	78.824	ENSTBEG00000003999	SND1	100	78.824	Tupaia_belangeri
ENSATEG00000018475	snd1	88	79.704	ENSTTRG00000006059	SND1	98	78.547	Tursiops_truncatus
ENSATEG00000018475	snd1	62	76.501	ENSUAMG00000002820	-	89	76.501	Ursus_americanus
ENSATEG00000018475	snd1	78	82.318	ENSUAMG00000005604	-	90	82.318	Ursus_americanus
ENSATEG00000018475	snd1	89	83.017	ENSUMAG00000005960	SND1	98	83.017	Ursus_maritimus
ENSATEG00000018475	snd1	67	80.328	ENSVPAG00000008302	SND1	70	80.328	Vicugna_pacos
ENSATEG00000018475	snd1	89	83.128	ENSVVUG00000007226	SND1	98	83.128	Vulpes_vulpes
ENSATEG00000018475	snd1	87	81.933	ENSXETG00000023043	snd1	100	80.708	Xenopus_tropicalis
ENSATEG00000018475	snd1	84	93.468	ENSXCOG00000013629	snd1	99	93.468	Xiphophorus_couchianus
ENSATEG00000018475	snd1	89	95.973	ENSXMAG00000011469	snd1	98	95.973	Xiphophorus_maculatus