EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSATEG00000018573 (Gene tree)
Gene ID
113172893
Gene Symbol
RBMS1 (1 of many)
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Anabas_testudineus
Status
putative
Strand
Plus strand
Length
16101 bases
Position
chrOOHO01000008.1:13494446-13510546
Accession
113172893
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSATEP00000026881RRM_1PF00076.222.5e-3112
ENSATEP00000026881RRM_1PF00076.222.5e-3122
ENSATEP00000026894RRM_1PF00076.222.5e-3112
ENSATEP00000026894RRM_1PF00076.222.5e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSATET00000027320RBMS1 (1 of many)-2022319-ENSATEP00000026894392 (aa)-UPI000E4646B3
ENSATET00000027307RBMS1 (1 of many)-2013826XM_026375957ENSATEP00000026881392 (aa)XP_026231742UPI000E4646B3
Gene Model
Click here to download ENSATEG00000018573's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000018573's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSATEG00000018573RBMS18867.204ENSATEG00000024295rbms38667.473
ENSATEG00000018573RBMS19070.704ENSATEG00000022569rbms2b10067.164
ENSATEG00000018573RBMS19066.842ENSATEG00000008433-9765.375
ENSATEG00000018573RBMS19964.433ENSATEG00000015450rbms1a9964.433
ENSATEG00000018573RBMS19970.229ENSATEG00000024715rbms2a9670.229
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSATEG00000018573RBMS18977.841ENSG00000153250RBMS110087.402Homo_sapiens
ENSATEG00000018573RBMS110088.636ENSAPOG00000024437-10089.394Acanthochromis_polyacanthus
ENSATEG00000018573RBMS19966.237ENSAPOG00000013761rbms1a9966.237Acanthochromis_polyacanthus
ENSATEG00000018573RBMS18976.124ENSAMEG00000012661RBMS19875.000Ailuropoda_melanoleuca
ENSATEG00000018573RBMS19588.267ENSACIG00000021498RBMS19588.800Amphilophus_citrinellus
ENSATEG00000018573RBMS19960.309ENSACIG00000000113rbms1a9960.567Amphilophus_citrinellus
ENSATEG00000018573RBMS110088.861ENSAOCG00000014482-10089.114Amphiprion_ocellaris
ENSATEG00000018573RBMS19966.237ENSAOCG00000010066rbms1a9966.237Amphiprion_ocellaris
ENSATEG00000018573RBMS110088.608ENSAPEG00000018371-10088.861Amphiprion_percula
ENSATEG00000018573RBMS19966.237ENSAPEG00000023563rbms1a9966.237Amphiprion_percula
ENSATEG00000018573RBMS18979.261ENSAPLG00000007282RBMS19776.166Anas_platyrhynchos
ENSATEG00000018573RBMS19775.385ENSACAG00000011984RBMS18275.063Anolis_carolinensis
ENSATEG00000018573RBMS18176.398ENSANAG00000024424RBMS110076.398Aotus_nancymaae
ENSATEG00000018573RBMS110085.316ENSACLG00000013048RBMS110085.316Astatotilapia_calliptera
ENSATEG00000018573RBMS19965.206ENSACLG00000021512rbms1a9965.464Astatotilapia_calliptera
ENSATEG00000018573RBMS110079.798ENSAMXG00000009969RBMS110079.545Astyanax_mexicanus
ENSATEG00000018573RBMS110070.707ENSAMXG00000002146rbms1a9971.212Astyanax_mexicanus
ENSATEG00000018573RBMS19775.064ENSBTAG00000005180RBMS110074.321Bos_taurus
ENSATEG00000018573RBMS18977.557ENSCJAG00000014861-9576.064Callithrix_jacchus
ENSATEG00000018573RBMS19873.333ENSCJAG00000012871-9973.810Callithrix_jacchus
ENSATEG00000018573RBMS19869.330ENSCJAG00000022465-10070.000Callithrix_jacchus
ENSATEG00000018573RBMS19774.807ENSCAFG00000009922RBMS110074.074Canis_familiaris
ENSATEG00000018573RBMS19771.605ENSCAFG00020006120RBMS110071.021Canis_lupus_dingo
ENSATEG00000018573RBMS18977.273ENSCHIG00000023380RBMS19574.352Capra_hircus
ENSATEG00000018573RBMS18977.841ENSTSYG00000005584RBMS19577.337Carlito_syrichta
ENSATEG00000018573RBMS18977.557ENSCPOG00000012310RBMS19972.959Cavia_porcellus
ENSATEG00000018573RBMS18977.557ENSCCAG00000033841RBMS19776.330Cebus_capucinus
ENSATEG00000018573RBMS19774.611ENSCATG00000043032RBMS110075.389Cercocebus_atys
ENSATEG00000018573RBMS18977.273ENSCLAG00000003031RBMS19476.064Chinchilla_lanigera
ENSATEG00000018573RBMS18977.841ENSCSAG00000015687RBMS19574.870Chlorocebus_sabaeus
ENSATEG00000018573RBMS110076.675ENSCPBG00000026455RBMS110077.171Chrysemys_picta_bellii
ENSATEG00000018573RBMS19774.611ENSCANG00000042152RBMS110075.130Colobus_angolensis_palliatus
ENSATEG00000018573RBMS110070.309ENSCGRG00001022833Rbms110070.784Cricetulus_griseus_chok1gshd
ENSATEG00000018573RBMS18976.989ENSCGRG00000008824Rbms19972.704Cricetulus_griseus_crigri
ENSATEG00000018573RBMS19963.918ENSCSEG00000000889rbms1a9963.918Cynoglossus_semilaevis
ENSATEG00000018573RBMS110084.383ENSCSEG00000010652RBMS110084.635Cynoglossus_semilaevis
ENSATEG00000018573RBMS19965.464ENSCVAG00000014698rbms1a9965.464Cyprinodon_variegatus
ENSATEG00000018573RBMS110083.929ENSCVAG00000002027RBMS110083.929Cyprinodon_variegatus
ENSATEG00000018573RBMS110070.101ENSDARG00000074023rbms1a9970.854Danio_rerio
ENSATEG00000018573RBMS18974.185ENSDNOG00000040691RBMS19573.984Dasypus_novemcinctus
ENSATEG00000018573RBMS18977.557ENSDORG00000007103Rbms19476.330Dipodomys_ordii
ENSATEG00000018573RBMS18967.330ENSETEG00000012135RBMS19966.755Echinops_telfairi
ENSATEG00000018573RBMS19775.064ENSEASG00005023132RBMS110074.321Equus_asinus_asinus
ENSATEG00000018573RBMS19771.852ENSECAG00000019894RBMS110071.259Equus_caballus
ENSATEG00000018573RBMS16793.878ENSEEUG00000005628RBMS17473.494Erinaceus_europaeus
ENSATEG00000018573RBMS19671.240ENSELUG00000019328RBMS19471.504Esox_lucius
ENSATEG00000018573RBMS110067.513ENSELUG00000018923rbms1a10068.750Esox_lucius
ENSATEG00000018573RBMS18977.273ENSFCAG00000012524RBMS19576.771Felis_catus
ENSATEG00000018573RBMS18979.261ENSFALG00000004440RBMS19579.037Ficedula_albicollis
ENSATEG00000018573RBMS19873.604ENSFDAG00000015692RBMS19972.959Fukomys_damarensis
ENSATEG00000018573RBMS110084.184ENSFHEG00000000720RBMS110084.949Fundulus_heteroclitus
ENSATEG00000018573RBMS19965.722ENSFHEG00000005662rbms1a9773.134Fundulus_heteroclitus
ENSATEG00000018573RBMS18865.352ENSGMOG00000000525rbms1a9965.352Gadus_morhua
ENSATEG00000018573RBMS19776.607ENSGALG00000011132RBMS110075.434Gallus_gallus
ENSATEG00000018573RBMS110084.264ENSGAFG00000007708RBMS110084.010Gambusia_affinis
ENSATEG00000018573RBMS18868.314ENSGAFG00000011633rbms1a9966.213Gambusia_affinis
ENSATEG00000018573RBMS19263.564ENSGACG00000015174rbms1a9168.308Gasterosteus_aculeatus
ENSATEG00000018573RBMS110089.286ENSGACG00000005671RBMS110089.286Gasterosteus_aculeatus
ENSATEG00000018573RBMS110077.916ENSGAGG00000007866RBMS110077.171Gopherus_agassizii
ENSATEG00000018573RBMS19675.131ENSGGOG00000001264RBMS19875.654Gorilla_gorilla
ENSATEG00000018573RBMS19773.196ENSGGOG00000043756-10072.346Gorilla_gorilla
ENSATEG00000018573RBMS19965.206ENSHBUG00000004802rbms1a9965.464Haplochromis_burtoni
ENSATEG00000018573RBMS19485.215ENSHBUG00000004516RBMS19885.484Haplochromis_burtoni
ENSATEG00000018573RBMS18977.273ENSHGLG00000010387RBMS19973.604Heterocephalus_glaber_female
ENSATEG00000018573RBMS18977.273ENSHGLG00100014105RBMS19873.604Heterocephalus_glaber_male
ENSATEG00000018573RBMS110081.266ENSHCOG00000016668RBMS110081.772Hippocampus_comes
ENSATEG00000018573RBMS19964.433ENSHCOG00000020097rbms1a9964.433Hippocampus_comes
ENSATEG00000018573RBMS110071.212ENSIPUG00000010131RBMS19971.717Ictalurus_punctatus
ENSATEG00000018573RBMS110080.253ENSIPUG00000014677RBMS110079.747Ictalurus_punctatus
ENSATEG00000018573RBMS18977.841ENSSTOG00000012501RBMS19973.214Ictidomys_tridecemlineatus
ENSATEG00000018573RBMS18976.705ENSJJAG00000016543Rbms19573.834Jaculus_jaculus
ENSATEG00000018573RBMS110084.051ENSKMAG00000013911RBMS110084.304Kryptolebias_marmoratus
ENSATEG00000018573RBMS19963.660ENSKMAG00000011839-9963.660Kryptolebias_marmoratus
ENSATEG00000018573RBMS110089.873ENSLBEG00000005787RBMS110090.127Labrus_bergylta
ENSATEG00000018573RBMS19965.464ENSLBEG00000025962rbms1a9965.464Labrus_bergylta
ENSATEG00000018573RBMS110076.427ENSLACG00000004324RBMS19976.179Latimeria_chalumnae
ENSATEG00000018573RBMS110079.747ENSLOCG00000008622rbms1a10079.747Lepisosteus_oculatus
ENSATEG00000018573RBMS18976.705ENSLAFG00000017217RBMS19875.532Loxodonta_africana
ENSATEG00000018573RBMS18977.841ENSMFAG00000000274RBMS110075.389Macaca_fascicularis
ENSATEG00000018573RBMS19772.099ENSMMUG00000016825RBMS110075.389Macaca_mulatta
ENSATEG00000018573RBMS18977.841ENSMNEG00000039425RBMS110075.389Macaca_nemestrina
ENSATEG00000018573RBMS19774.352ENSMLEG00000031517RBMS110075.130Mandrillus_leucophaeus
ENSATEG00000018573RBMS110088.579ENSMAMG00000003159-10089.340Mastacembelus_armatus
ENSATEG00000018573RBMS19964.175ENSMAMG00000005018rbms1a9964.175Mastacembelus_armatus
ENSATEG00000018573RBMS18487.273ENSMZEG00005007313RBMS19782.659Maylandia_zebra
ENSATEG00000018573RBMS19965.206ENSMZEG00005005661rbms1a9965.464Maylandia_zebra
ENSATEG00000018573RBMS18979.545ENSMGAG00000011054RBMS110078.419Meleagris_gallopavo
ENSATEG00000018573RBMS110070.546ENSMAUG00000008550Rbms110071.021Mesocricetus_auratus
ENSATEG00000018573RBMS18976.989ENSMICG00000008325RBMS19875.798Microcebus_murinus
ENSATEG00000018573RBMS110069.834ENSMOCG00000022617Rbms110070.309Microtus_ochrogaster
ENSATEG00000018573RBMS19961.856ENSMMOG00000018249rbms1a9961.856Mola_mola
ENSATEG00000018573RBMS110088.861ENSMMOG00000003707RBMS110088.861Mola_mola
ENSATEG00000018573RBMS18979.545ENSMODG00000005250RBMS19576.166Monodelphis_domestica
ENSATEG00000018573RBMS19687.302ENSMALG00000015715-10088.010Monopterus_albus
ENSATEG00000018573RBMS19964.433ENSMALG00000014235rbms1a9964.433Monopterus_albus
ENSATEG00000018573RBMS19970.264MGP_CAROLIEiJ_G0023586Rbms110070.309Mus_caroli
ENSATEG00000018573RBMS19970.504ENSMUSG00000026970Rbms110070.784Mus_musculus
ENSATEG00000018573RBMS110072.346MGP_PahariEiJ_G0025037Rbms110072.840Mus_pahari
ENSATEG00000018573RBMS19970.504MGP_SPRETEiJ_G0024508Rbms110070.784Mus_spretus
ENSATEG00000018573RBMS18973.641ENSMPUG00000000539RBMS19571.144Mustela_putorius_furo
ENSATEG00000018573RBMS18972.973ENSMLUG00000008762RBMS19472.081Myotis_lucifugus
ENSATEG00000018573RBMS110069.834ENSNGAG00000013636Rbms110070.309Nannospalax_galili
ENSATEG00000018573RBMS18984.241ENSNBRG00000015151RBMS110083.198Neolamprologus_brichardi
ENSATEG00000018573RBMS18866.377ENSNBRG00000020217rbms1a9566.667Neolamprologus_brichardi
ENSATEG00000018573RBMS19774.807ENSNLEG00000001667RBMS19975.321Nomascus_leucogenys
ENSATEG00000018573RBMS18167.391ENSMEUG00000000746RBMS110067.391Notamacropus_eugenii
ENSATEG00000018573RBMS18970.739ENSOPRG00000012431RBMS19568.394Ochotona_princeps
ENSATEG00000018573RBMS18976.989ENSODEG00000013934RBMS19574.093Octodon_degus
ENSATEG00000018573RBMS110086.329ENSONIG00000008934RBMS110086.582Oreochromis_niloticus
ENSATEG00000018573RBMS19965.464ENSONIG00000003329rbms1a9965.722Oreochromis_niloticus
ENSATEG00000018573RBMS19676.702ENSOANG00000006166RBMS19677.225Ornithorhynchus_anatinus
ENSATEG00000018573RBMS15552.675ENSOANG00000004477-9952.869Ornithorhynchus_anatinus
ENSATEG00000018573RBMS18977.557ENSOCUG00000017365RBMS18876.330Oryctolagus_cuniculus
ENSATEG00000018573RBMS19963.402ENSORLG00000003917rbms1a9963.402Oryzias_latipes
ENSATEG00000018573RBMS110079.644ENSORLG00000016818RBMS19980.407Oryzias_latipes
ENSATEG00000018573RBMS19963.496ENSORLG00020018663rbms1a9963.496Oryzias_latipes_hni
ENSATEG00000018573RBMS110079.644ENSORLG00020022335RBMS19980.407Oryzias_latipes_hni
ENSATEG00000018573RBMS110080.153ENSORLG00015018208RBMS19980.916Oryzias_latipes_hsok
ENSATEG00000018573RBMS19963.753ENSORLG00015016556rbms1a9963.753Oryzias_latipes_hsok
ENSATEG00000018573RBMS110081.122ENSOMEG00000002394RBMS19982.143Oryzias_melastigma
ENSATEG00000018573RBMS18976.836ENSOGAG00000002900RBMS19576.620Otolemur_garnettii
ENSATEG00000018573RBMS18977.273ENSOARG00000006870RBMS19574.352Ovis_aries
ENSATEG00000018573RBMS19675.131ENSPPAG00000040083RBMS19876.596Pan_paniscus
ENSATEG00000018573RBMS18974.432ENSPPAG00000036520-9973.670Pan_paniscus
ENSATEG00000018573RBMS18977.273ENSPPRG00000005040RBMS19576.771Panthera_pardus
ENSATEG00000018573RBMS18977.273ENSPTIG00000021240RBMS19576.771Panthera_tigris_altaica
ENSATEG00000018573RBMS19675.131ENSPTRG00000052304RBMS19876.596Pan_troglodytes
ENSATEG00000018573RBMS18975.000ENSPTRG00000039358-9773.936Pan_troglodytes
ENSATEG00000018573RBMS18977.841ENSPANG00000001383RBMS110075.389Papio_anubis
ENSATEG00000018573RBMS110077.078ENSPKIG00000001498rbms1a10077.834Paramormyrops_kingsleyae
ENSATEG00000018573RBMS110077.411ENSPKIG00000012818rbms1a10077.157Paramormyrops_kingsleyae
ENSATEG00000018573RBMS18979.261ENSPSIG00000010240RBMS19875.567Pelodiscus_sinensis
ENSATEG00000018573RBMS19961.082ENSPMGG00000004341rbms1a9961.340Periophthalmus_magnuspinnatus
ENSATEG00000018573RBMS18682.738ENSPMGG00000006310RBMS19677.937Periophthalmus_magnuspinnatus
ENSATEG00000018573RBMS19771.358ENSPEMG00000009449Rbms19575.798Peromyscus_maniculatus_bairdii
ENSATEG00000018573RBMS110075.556ENSPCIG00000018405RBMS110075.802Phascolarctos_cinereus
ENSATEG00000018573RBMS19965.722ENSPFOG00000016116rbms1a9965.722Poecilia_formosa
ENSATEG00000018573RBMS110084.304ENSPFOG00000017483RBMS110084.557Poecilia_formosa
ENSATEG00000018573RBMS110084.772ENSPLAG00000000920RBMS110084.518Poecilia_latipinna
ENSATEG00000018573RBMS19965.722ENSPLAG00000013864rbms1a9965.722Poecilia_latipinna
ENSATEG00000018573RBMS19965.722ENSPMEG00000016185rbms1a9965.722Poecilia_mexicana
ENSATEG00000018573RBMS110084.304ENSPMEG00000015838RBMS110084.557Poecilia_mexicana
ENSATEG00000018573RBMS110085.063ENSPREG00000008146RBMS110084.810Poecilia_reticulata
ENSATEG00000018573RBMS19965.722ENSPREG00000020161rbms1a9965.722Poecilia_reticulata
ENSATEG00000018573RBMS18974.185ENSPPYG00000012879-9571.642Pongo_abelii
ENSATEG00000018573RBMS18971.591ENSPCAG00000009673RBMS19569.171Procavia_capensis
ENSATEG00000018573RBMS18976.989ENSPCOG00000027294RBMS19576.487Propithecus_coquereli
ENSATEG00000018573RBMS18966.193ENSPVAG00000010429RBMS19564.249Pteropus_vampyrus
ENSATEG00000018573RBMS110085.316ENSPNYG00000002643RBMS110085.570Pundamilia_nyererei
ENSATEG00000018573RBMS110081.313ENSPNAG00000023479RBMS110081.061Pygocentrus_nattereri
ENSATEG00000018573RBMS18973.851ENSPNAG00000010225rbms1a9672.105Pygocentrus_nattereri
ENSATEG00000018573RBMS18876.437ENSRNOG00000008482Rbms19672.165Rattus_norvegicus
ENSATEG00000018573RBMS19774.160ENSRBIG00000044262RBMS110074.935Rhinopithecus_bieti
ENSATEG00000018573RBMS19774.611ENSRROG00000043108RBMS110075.389Rhinopithecus_roxellana
ENSATEG00000018573RBMS18977.557ENSSBOG00000034705RBMS19874.869Saimiri_boliviensis_boliviensis
ENSATEG00000018573RBMS18979.261ENSSHAG00000012271RBMS110073.913Sarcophilus_harrisii
ENSATEG00000018573RBMS18976.724ENSSFOG00015014493rbms1a10076.087Scleropages_formosus
ENSATEG00000018573RBMS110078.734ENSSFOG00015022929rbms110078.987Scleropages_formosus
ENSATEG00000018573RBMS110088.579ENSSMAG00000012152RBMS19689.340Scophthalmus_maximus
ENSATEG00000018573RBMS18866.860ENSSMAG00000012722rbms1a9566.860Scophthalmus_maximus
ENSATEG00000018573RBMS110089.367ENSSDUG00000018803RBMS110089.620Seriola_dumerili
ENSATEG00000018573RBMS19965.722ENSSDUG00000020602rbms1a9965.722Seriola_dumerili
ENSATEG00000018573RBMS19965.722ENSSLDG00000009495rbms1a9965.722Seriola_lalandi_dorsalis
ENSATEG00000018573RBMS110089.620ENSSLDG00000016556RBMS110089.873Seriola_lalandi_dorsalis
ENSATEG00000018573RBMS18952.707ENSSARG00000011085RBMS19552.208Sorex_araneus
ENSATEG00000018573RBMS18979.545ENSSPUG00000017163RBMS19479.320Sphenodon_punctatus
ENSATEG00000018573RBMS19965.979ENSSPAG00000005371rbms1a9965.979Stegastes_partitus
ENSATEG00000018573RBMS110089.620ENSSPAG00000000059RBMS110089.873Stegastes_partitus
ENSATEG00000018573RBMS18977.273ENSSSCG00000015888RBMS110073.827Sus_scrofa
ENSATEG00000018573RBMS18979.261ENSTGUG00000006606RBMS19576.166Taeniopygia_guttata
ENSATEG00000018573RBMS19964.194ENSTRUG00000017155rbms1a9964.194Takifugu_rubripes
ENSATEG00000018573RBMS110082.872ENSTRUG00000005466-10084.383Takifugu_rubripes
ENSATEG00000018573RBMS18865.407ENSTNIG00000009477rbms1a9963.385Tetraodon_nigroviridis
ENSATEG00000018573RBMS19486.450ENSTNIG00000016496RBMS19986.179Tetraodon_nigroviridis
ENSATEG00000018573RBMS18969.886ENSTBEG00000016156RBMS19969.149Tupaia_belangeri
ENSATEG00000018573RBMS18976.989ENSTTRG00000011058RBMS19975.798Tursiops_truncatus
ENSATEG00000018573RBMS18976.989ENSUAMG00000022331RBMS19574.674Ursus_americanus
ENSATEG00000018573RBMS18976.989ENSUMAG00000008605RBMS19775.798Ursus_maritimus
ENSATEG00000018573RBMS19176.177ENSVPAG00000002716RBMS19576.731Vicugna_pacos
ENSATEG00000018573RBMS18976.989ENSVVUG00000018682RBMS19576.771Vulpes_vulpes
ENSATEG00000018573RBMS19472.340ENSXETG00000016204rbms19872.414Xenopus_tropicalis
ENSATEG00000018573RBMS18986.246ENSXCOG00000000211RBMS110084.511Xiphophorus_couchianus
ENSATEG00000018573RBMS19962.887ENSXCOG00000001659rbms1a9962.887Xiphophorus_couchianus
ENSATEG00000018573RBMS19965.722ENSXMAG00000001802rbms1a9965.722Xiphophorus_maculatus
ENSATEG00000018573RBMS110083.544ENSXMAG00000011405RBMS110083.797Xiphophorus_maculatus

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