EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000018683 (Gene tree)
Gene ID: 113162334
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 7084 bases
Position: chrOOHO01000002.1:19771999-19779082
Accession: 113162334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000027037	EXOSC1	PF10447.9	1.6e-15	1	1
ENSATEP00000027049	ECR1_N	PF14382.6	1.3e-11	1	1
ENSATEP00000027037	ECR1_N	PF14382.6	1.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000027466	-	4839	-	ENSATEP00000027037	194 (aa)	XP_026216194	UPI000E465280
ENSATET00000027477	-	465	-	ENSATEP00000027049	154 (aa)	-	-

Gene Model

Click here to download ENSATEG00000018683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000018683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000018683	exosc1	98	79.581	ENSG00000171311	EXOSC1	98	79.581	Homo_sapiens
ENSATEG00000018683	exosc1	100	98.969	ENSAPOG00000007822	exosc1	100	98.969	Acanthochromis_polyacanthus
ENSATEG00000018683	exosc1	98	80.105	ENSAMEG00000000129	EXOSC1	98	80.105	Ailuropoda_melanoleuca
ENSATEG00000018683	exosc1	95	97.838	ENSACIG00000018956	exosc1	91	97.838	Amphilophus_citrinellus
ENSATEG00000018683	exosc1	100	98.969	ENSAOCG00000010699	exosc1	100	98.969	Amphiprion_ocellaris
ENSATEG00000018683	exosc1	93	87.222	ENSAPEG00000012690	exosc1	97	87.222	Amphiprion_percula
ENSATEG00000018683	exosc1	96	77.540	ENSACAG00000002101	EXOSC1	96	77.540	Anolis_carolinensis
ENSATEG00000018683	exosc1	98	79.581	ENSANAG00000034669	EXOSC1	98	79.581	Aotus_nancymaae
ENSATEG00000018683	exosc1	100	98.454	ENSACLG00000021243	exosc1	100	98.454	Astatotilapia_calliptera
ENSATEG00000018683	exosc1	100	94.330	ENSAMXG00000011116	exosc1	100	94.330	Astyanax_mexicanus
ENSATEG00000018683	exosc1	98	80.105	ENSBTAG00000012699	EXOSC1	98	80.105	Bos_taurus
ENSATEG00000018683	exosc1	94	36.126	WBGene00012966	exos-1	92	36.126	Caenorhabditis_elegans
ENSATEG00000018683	exosc1	98	79.058	ENSCJAG00000016586	EXOSC1	98	79.058	Callithrix_jacchus
ENSATEG00000018683	exosc1	98	79.581	ENSCAFG00000009068	EXOSC1	92	79.581	Canis_familiaris
ENSATEG00000018683	exosc1	98	79.581	ENSCAFG00020006002	EXOSC1	92	79.581	Canis_lupus_dingo
ENSATEG00000018683	exosc1	98	80.105	ENSCHIG00000015253	EXOSC1	98	80.105	Capra_hircus
ENSATEG00000018683	exosc1	98	78.534	ENSTSYG00000000760	EXOSC1	98	78.534	Carlito_syrichta
ENSATEG00000018683	exosc1	98	79.581	ENSCPOG00000001173	EXOSC1	98	79.581	Cavia_porcellus
ENSATEG00000018683	exosc1	98	42.487	ENSCCAG00000023986	EXOSC1	98	42.487	Cebus_capucinus
ENSATEG00000018683	exosc1	98	79.581	ENSCATG00000034114	EXOSC1	98	79.581	Cercocebus_atys
ENSATEG00000018683	exosc1	98	79.581	ENSCLAG00000002463	EXOSC1	98	79.581	Chinchilla_lanigera
ENSATEG00000018683	exosc1	98	79.058	ENSCSAG00000005870	EXOSC1	98	79.058	Chlorocebus_sabaeus
ENSATEG00000018683	exosc1	95	66.848	ENSCHOG00000006477	EXOSC1	98	66.848	Choloepus_hoffmanni
ENSATEG00000018683	exosc1	55	66.355	ENSCPBG00000011949	EXOSC1	88	66.355	Chrysemys_picta_bellii
ENSATEG00000018683	exosc1	99	50.777	ENSCING00000022734	-	92	50.777	Ciona_intestinalis
ENSATEG00000018683	exosc1	99	54.404	ENSCSAVG00000010865	-	98	54.404	Ciona_savignyi
ENSATEG00000018683	exosc1	98	79.581	ENSCANG00000034159	EXOSC1	98	79.581	Colobus_angolensis_palliatus
ENSATEG00000018683	exosc1	98	78.534	ENSCGRG00001000335	Exosc1	98	78.534	Cricetulus_griseus_chok1gshd
ENSATEG00000018683	exosc1	98	78.534	ENSCGRG00000011602	Exosc1	98	78.534	Cricetulus_griseus_crigri
ENSATEG00000018683	exosc1	100	82.474	ENSCSEG00000007895	exosc1	97	82.474	Cynoglossus_semilaevis
ENSATEG00000018683	exosc1	100	88.144	ENSCVAG00000016748	exosc1	100	88.144	Cyprinodon_variegatus
ENSATEG00000018683	exosc1	100	94.330	ENSDARG00000059841	exosc1	100	94.330	Danio_rerio
ENSATEG00000018683	exosc1	74	75.862	ENSDNOG00000007983	EXOSC1	98	75.862	Dasypus_novemcinctus
ENSATEG00000018683	exosc1	98	79.058	ENSDORG00000016528	Exosc1	98	79.058	Dipodomys_ordii
ENSATEG00000018683	exosc1	95	47.895	FBgn0032346	Csl4	92	47.895	Drosophila_melanogaster
ENSATEG00000018683	exosc1	98	78.010	ENSETEG00000002469	-	98	78.010	Echinops_telfairi
ENSATEG00000018683	exosc1	97	66.146	ENSEBUG00000008164	exosc1	96	66.146	Eptatretus_burgeri
ENSATEG00000018683	exosc1	98	70.681	ENSEASG00005008684	EXOSC1	98	70.681	Equus_asinus_asinus
ENSATEG00000018683	exosc1	60	55.172	ENSECAG00000010621	EXOSC1	69	55.172	Equus_caballus
ENSATEG00000018683	exosc1	98	78.534	ENSEEUG00000005647	EXOSC1	98	78.534	Erinaceus_europaeus
ENSATEG00000018683	exosc1	99	91.371	ENSELUG00000017369	exosc1	87	91.371	Esox_lucius
ENSATEG00000018683	exosc1	98	80.105	ENSFCAG00000040563	EXOSC1	92	80.105	Felis_catus
ENSATEG00000018683	exosc1	98	78.010	ENSFALG00000008450	EXOSC1	98	78.010	Ficedula_albicollis
ENSATEG00000018683	exosc1	98	80.105	ENSFDAG00000000846	EXOSC1	98	80.105	Fukomys_damarensis
ENSATEG00000018683	exosc1	100	88.660	ENSFHEG00000009154	exosc1	100	88.660	Fundulus_heteroclitus
ENSATEG00000018683	exosc1	100	95.361	ENSGMOG00000008993	exosc1	100	95.361	Gadus_morhua
ENSATEG00000018683	exosc1	98	65.969	ENSGALG00000039917	EXOSC1	99	84.138	Gallus_gallus
ENSATEG00000018683	exosc1	100	88.660	ENSGAFG00000010265	exosc1	95	88.660	Gambusia_affinis
ENSATEG00000018683	exosc1	100	93.814	ENSGACG00000018936	exosc1	100	93.814	Gasterosteus_aculeatus
ENSATEG00000018683	exosc1	98	76.963	ENSGAGG00000019192	EXOSC1	98	76.963	Gopherus_agassizii
ENSATEG00000018683	exosc1	98	68.586	ENSGGOG00000003099	EXOSC1	98	68.586	Gorilla_gorilla
ENSATEG00000018683	exosc1	100	98.454	ENSHBUG00000017857	exosc1	100	98.454	Haplochromis_burtoni
ENSATEG00000018683	exosc1	98	80.105	ENSHGLG00000016927	EXOSC1	98	80.105	Heterocephalus_glaber_female
ENSATEG00000018683	exosc1	98	80.105	ENSHGLG00100012208	EXOSC1	98	80.105	Heterocephalus_glaber_male
ENSATEG00000018683	exosc1	100	95.361	ENSHCOG00000019882	exosc1	100	95.361	Hippocampus_comes
ENSATEG00000018683	exosc1	100	92.268	ENSIPUG00000007685	exosc1	100	92.268	Ictalurus_punctatus
ENSATEG00000018683	exosc1	61	63.025	ENSSTOG00000029860	-	91	63.025	Ictidomys_tridecemlineatus
ENSATEG00000018683	exosc1	98	79.058	ENSSTOG00000006615	EXOSC1	98	79.058	Ictidomys_tridecemlineatus
ENSATEG00000018683	exosc1	98	79.581	ENSJJAG00000013311	Exosc1	98	79.581	Jaculus_jaculus
ENSATEG00000018683	exosc1	100	94.330	ENSKMAG00000001202	exosc1	82	94.330	Kryptolebias_marmoratus
ENSATEG00000018683	exosc1	100	98.454	ENSLBEG00000011448	exosc1	100	98.454	Labrus_bergylta
ENSATEG00000018683	exosc1	99	83.648	ENSLOCG00000003776	exosc1	100	83.648	Lepisosteus_oculatus
ENSATEG00000018683	exosc1	98	79.581	ENSLAFG00000015983	EXOSC1	98	79.581	Loxodonta_africana
ENSATEG00000018683	exosc1	98	79.581	ENSMFAG00000001493	EXOSC1	98	79.581	Macaca_fascicularis
ENSATEG00000018683	exosc1	98	79.581	ENSMMUG00000020028	EXOSC1	97	78.000	Macaca_mulatta
ENSATEG00000018683	exosc1	98	79.581	ENSMNEG00000029816	EXOSC1	98	79.581	Macaca_nemestrina
ENSATEG00000018683	exosc1	97	78.000	ENSMLEG00000027643	EXOSC1	97	78.000	Mandrillus_leucophaeus
ENSATEG00000018683	exosc1	100	97.423	ENSMAMG00000012200	exosc1	100	97.423	Mastacembelus_armatus
ENSATEG00000018683	exosc1	100	98.454	ENSMZEG00005007042	exosc1	100	98.454	Maylandia_zebra
ENSATEG00000018683	exosc1	98	68.586	ENSMAUG00000020462	-	98	68.586	Mesocricetus_auratus
ENSATEG00000018683	exosc1	98	79.581	ENSMICG00000007664	EXOSC1	97	77.333	Microcebus_murinus
ENSATEG00000018683	exosc1	98	78.534	ENSMOCG00000006004	-	98	78.534	Microtus_ochrogaster
ENSATEG00000018683	exosc1	97	74.074	ENSMOCG00000017124	-	96	74.074	Microtus_ochrogaster
ENSATEG00000018683	exosc1	99	93.464	ENSMMOG00000021403	exosc1	100	93.464	Mola_mola
ENSATEG00000018683	exosc1	98	80.729	ENSMODG00000004213	EXOSC1	98	80.729	Monodelphis_domestica
ENSATEG00000018683	exosc1	95	97.297	ENSMALG00000007061	exosc1	93	97.297	Monopterus_albus
ENSATEG00000018683	exosc1	98	78.010	MGP_CAROLIEiJ_G0022959	Exosc1	98	78.010	Mus_caroli
ENSATEG00000018683	exosc1	98	78.010	ENSMUSG00000034321	Exosc1	98	78.010	Mus_musculus
ENSATEG00000018683	exosc1	98	78.534	MGP_PahariEiJ_G0014449	Exosc1	98	78.534	Mus_pahari
ENSATEG00000018683	exosc1	98	78.010	MGP_SPRETEiJ_G0023880	Exosc1	98	78.010	Mus_spretus
ENSATEG00000018683	exosc1	98	80.105	ENSMPUG00000017044	EXOSC1	98	80.105	Mustela_putorius_furo
ENSATEG00000018683	exosc1	98	79.581	ENSMLUG00000009228	EXOSC1	98	79.581	Myotis_lucifugus
ENSATEG00000018683	exosc1	98	76.963	ENSNGAG00000022033	Exosc1	98	76.963	Nannospalax_galili
ENSATEG00000018683	exosc1	100	98.701	ENSNBRG00000024007	exosc1	100	98.701	Neolamprologus_brichardi
ENSATEG00000018683	exosc1	98	79.058	ENSNLEG00000013872	EXOSC1	98	79.058	Nomascus_leucogenys
ENSATEG00000018683	exosc1	58	71.429	ENSMEUG00000002246	EXOSC1	97	71.429	Notamacropus_eugenii
ENSATEG00000018683	exosc1	98	80.105	ENSOPRG00000005065	EXOSC1	98	80.105	Ochotona_princeps
ENSATEG00000018683	exosc1	98	80.105	ENSODEG00000016709	EXOSC1	98	80.105	Octodon_degus
ENSATEG00000018683	exosc1	100	97.938	ENSONIG00000017683	exosc1	99	97.938	Oreochromis_niloticus
ENSATEG00000018683	exosc1	59	90.351	ENSOANG00000006563	EXOSC1	98	86.992	Ornithorhynchus_anatinus
ENSATEG00000018683	exosc1	98	73.822	ENSOCUG00000026461	-	98	73.822	Oryctolagus_cuniculus
ENSATEG00000018683	exosc1	98	78.125	ENSOCUG00000011898	-	98	78.125	Oryctolagus_cuniculus
ENSATEG00000018683	exosc1	100	90.769	ENSORLG00000011595	exosc1	100	90.769	Oryzias_latipes
ENSATEG00000018683	exosc1	100	90.769	ENSORLG00020005831	exosc1	100	90.769	Oryzias_latipes_hni
ENSATEG00000018683	exosc1	100	90.256	ENSORLG00015004317	exosc1	100	90.256	Oryzias_latipes_hsok
ENSATEG00000018683	exosc1	100	80.226	ENSOMEG00000013907	exosc1	100	80.226	Oryzias_melastigma
ENSATEG00000018683	exosc1	98	79.058	ENSOGAG00000016259	EXOSC1	98	79.058	Otolemur_garnettii
ENSATEG00000018683	exosc1	98	80.105	ENSOARG00000010136	EXOSC1	98	80.105	Ovis_aries
ENSATEG00000018683	exosc1	97	78.000	ENSPPAG00000039842	EXOSC1	97	78.000	Pan_paniscus
ENSATEG00000018683	exosc1	98	80.105	ENSPPRG00000023366	EXOSC1	98	80.105	Panthera_pardus
ENSATEG00000018683	exosc1	98	80.105	ENSPTIG00000017701	EXOSC1	98	80.105	Panthera_tigris_altaica
ENSATEG00000018683	exosc1	98	79.581	ENSPTRG00000002808	EXOSC1	98	79.581	Pan_troglodytes
ENSATEG00000018683	exosc1	98	79.581	ENSPANG00000021324	EXOSC1	98	79.581	Papio_anubis
ENSATEG00000018683	exosc1	100	91.753	ENSPKIG00000016037	exosc1	100	91.753	Paramormyrops_kingsleyae
ENSATEG00000018683	exosc1	91	66.316	ENSPSIG00000013571	EXOSC1	98	80.165	Pelodiscus_sinensis
ENSATEG00000018683	exosc1	100	83.505	ENSPMGG00000014002	exosc1	100	83.505	Periophthalmus_magnuspinnatus
ENSATEG00000018683	exosc1	98	78.534	ENSPEMG00000010710	-	98	78.534	Peromyscus_maniculatus_bairdii
ENSATEG00000018683	exosc1	95	71.505	ENSPMAG00000000195	exosc1	95	71.505	Petromyzon_marinus
ENSATEG00000018683	exosc1	98	79.581	ENSPCIG00000002210	EXOSC1	97	79.581	Phascolarctos_cinereus
ENSATEG00000018683	exosc1	100	88.144	ENSPFOG00000006755	exosc1	95	88.144	Poecilia_formosa
ENSATEG00000018683	exosc1	100	88.144	ENSPLAG00000005880	exosc1	100	88.144	Poecilia_latipinna
ENSATEG00000018683	exosc1	100	88.144	ENSPMEG00000015598	exosc1	95	88.144	Poecilia_mexicana
ENSATEG00000018683	exosc1	100	76.804	ENSPREG00000000405	exosc1	94	76.804	Poecilia_reticulata
ENSATEG00000018683	exosc1	98	79.581	ENSPPYG00000002531	EXOSC1	98	79.581	Pongo_abelii
ENSATEG00000018683	exosc1	98	78.534	ENSPCAG00000009135	EXOSC1	98	78.534	Procavia_capensis
ENSATEG00000018683	exosc1	98	73.298	ENSPCOG00000027539	EXOSC1	98	73.298	Propithecus_coquereli
ENSATEG00000018683	exosc1	98	79.581	ENSPVAG00000003372	EXOSC1	98	79.581	Pteropus_vampyrus
ENSATEG00000018683	exosc1	100	98.454	ENSPNYG00000021745	exosc1	100	98.454	Pundamilia_nyererei
ENSATEG00000018683	exosc1	100	93.299	ENSPNAG00000001944	exosc1	100	93.299	Pygocentrus_nattereri
ENSATEG00000018683	exosc1	98	78.534	ENSRNOG00000048708	Exosc1	98	78.534	Rattus_norvegicus
ENSATEG00000018683	exosc1	98	79.581	ENSRBIG00000035618	EXOSC1	98	79.581	Rhinopithecus_bieti
ENSATEG00000018683	exosc1	98	79.581	ENSRROG00000032589	EXOSC1	97	78.000	Rhinopithecus_roxellana
ENSATEG00000018683	exosc1	64	38.125	YNL232W	CSL4	54	38.125	Saccharomyces_cerevisiae
ENSATEG00000018683	exosc1	98	79.581	ENSSBOG00000000359	EXOSC1	98	79.581	Saimiri_boliviensis_boliviensis
ENSATEG00000018683	exosc1	75	89.041	ENSSHAG00000018219	EXOSC1	99	89.041	Sarcophilus_harrisii
ENSATEG00000018683	exosc1	100	91.237	ENSSFOG00015009069	exosc1	100	91.237	Scleropages_formosus
ENSATEG00000018683	exosc1	100	89.175	ENSSFOG00015016289	-	100	89.175	Scleropages_formosus
ENSATEG00000018683	exosc1	100	98.701	ENSSMAG00000003721	exosc1	100	98.701	Scophthalmus_maximus
ENSATEG00000018683	exosc1	100	97.423	ENSSDUG00000002993	exosc1	100	97.423	Seriola_dumerili
ENSATEG00000018683	exosc1	100	97.423	ENSSLDG00000025181	exosc1	100	97.423	Seriola_lalandi_dorsalis
ENSATEG00000018683	exosc1	98	68.063	ENSSARG00000000162	EXOSC1	98	68.063	Sorex_araneus
ENSATEG00000018683	exosc1	98	74.869	ENSSPUG00000012263	EXOSC1	98	74.869	Sphenodon_punctatus
ENSATEG00000018683	exosc1	100	89.691	ENSSPAG00000016792	exosc1	83	89.691	Stegastes_partitus
ENSATEG00000018683	exosc1	98	79.058	ENSSSCG00000010518	EXOSC1	89	79.058	Sus_scrofa
ENSATEG00000018683	exosc1	98	77.487	ENSTGUG00000009692	EXOSC1	98	77.487	Taeniopygia_guttata
ENSATEG00000018683	exosc1	98	82.632	ENSTRUG00000007706	exosc1	98	82.632	Takifugu_rubripes
ENSATEG00000018683	exosc1	98	82.383	ENSTNIG00000014079	exosc1	97	82.383	Tetraodon_nigroviridis
ENSATEG00000018683	exosc1	98	73.822	ENSTBEG00000006011	EXOSC1	98	73.822	Tupaia_belangeri
ENSATEG00000018683	exosc1	94	81.421	ENSTTRG00000009887	EXOSC1	99	81.421	Tursiops_truncatus
ENSATEG00000018683	exosc1	98	67.045	ENSUAMG00000010266	EXOSC1	98	67.045	Ursus_americanus
ENSATEG00000018683	exosc1	98	67.045	ENSUMAG00000022002	EXOSC1	98	67.045	Ursus_maritimus
ENSATEG00000018683	exosc1	98	79.581	ENSVVUG00000023192	EXOSC1	62	79.581	Vulpes_vulpes
ENSATEG00000018683	exosc1	99	77.202	ENSXETG00000003434	exosc1	99	77.202	Xenopus_tropicalis
ENSATEG00000018683	exosc1	62	89.256	ENSXCOG00000014499	exosc1	93	89.256	Xiphophorus_couchianus
ENSATEG00000018683	exosc1	100	76.804	ENSXMAG00000023382	exosc1	94	76.804	Xiphophorus_maculatus