EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000019026 (Gene tree)
Gene ID: 113171320
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 3861 bases
Position: chrOOHO01000003.1:17853037-17856897
Accession: 113171320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000027533	zf-C2H2	PF00096.26	1.7e-24	1	5
ENSATEP00000027533	zf-C2H2	PF00096.26	1.7e-24	2	5
ENSATEP00000027533	zf-C2H2	PF00096.26	1.7e-24	3	5
ENSATEP00000027533	zf-C2H2	PF00096.26	1.7e-24	4	5
ENSATEP00000027533	zf-C2H2	PF00096.26	1.7e-24	5	5
ENSATEP00000027512	zf-C2H2	PF00096.26	4.1e-21	1	5
ENSATEP00000027512	zf-C2H2	PF00096.26	4.1e-21	2	5
ENSATEP00000027512	zf-C2H2	PF00096.26	4.1e-21	3	5
ENSATEP00000027512	zf-C2H2	PF00096.26	4.1e-21	4	5
ENSATEP00000027512	zf-C2H2	PF00096.26	4.1e-21	5	5
ENSATEP00000027520	zf-C2H2	PF00096.26	4.1e-21	1	5
ENSATEP00000027520	zf-C2H2	PF00096.26	4.1e-21	2	5
ENSATEP00000027520	zf-C2H2	PF00096.26	4.1e-21	3	5
ENSATEP00000027520	zf-C2H2	PF00096.26	4.1e-21	4	5
ENSATEP00000027520	zf-C2H2	PF00096.26	4.1e-21	5	5
ENSATEP00000027533	zf-met	PF12874.7	8.1e-06	1	1
ENSATEP00000027512	zf-met	PF12874.7	2.9e-05	1	1
ENSATEP00000027520	zf-met	PF12874.7	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000027966	-	966	-	ENSATEP00000027533	321 (aa)	-	-
ENSATET00000027953	-	2038	-	ENSATEP00000027520	400 (aa)	XP_026229395	UPI000E4622D7
ENSATET00000027945	-	1798	XM_026373609	ENSATEP00000027512	400 (aa)	XP_026229394	UPI000E4622D7

Gene Model

Click here to download ENSATEG00000019026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000019026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000019026	gfi1aa	53	35.829	ENSATEG00000022022	-	93	35.294
ENSATEG00000019026	gfi1aa	56	42.029	ENSATEG00000008683	si:ch211-241b2.1	81	42.029
ENSATEG00000019026	gfi1aa	59	41.935	ENSATEG00000005519	-	96	44.444
ENSATEG00000019026	gfi1aa	79	43.976	ENSATEG00000018051	-	95	47.887
ENSATEG00000019026	gfi1aa	55	44.928	ENSATEG00000008761	-	59	44.928
ENSATEG00000019026	gfi1aa	52	45.399	ENSATEG00000015695	-	89	45.399
ENSATEG00000019026	gfi1aa	52	43.119	ENSATEG00000008649	-	74	43.119
ENSATEG00000019026	gfi1aa	53	45.000	ENSATEG00000014684	-	90	40.800
ENSATEG00000019026	gfi1aa	60	38.346	ENSATEG00000018374	GZF1	88	41.250
ENSATEG00000019026	gfi1aa	68	40.146	ENSATEG00000023044	-	97	44.578
ENSATEG00000019026	gfi1aa	55	44.375	ENSATEG00000008674	-	51	44.375
ENSATEG00000019026	gfi1aa	52	40.625	ENSATEG00000013871	-	54	40.625
ENSATEG00000019026	gfi1aa	53	44.853	ENSATEG00000024551	-	66	44.853
ENSATEG00000019026	gfi1aa	54	34.375	ENSATEG00000024492	znf407	60	34.375
ENSATEG00000019026	gfi1aa	79	36.508	ENSATEG00000014755	-	65	36.310
ENSATEG00000019026	gfi1aa	60	41.912	ENSATEG00000022839	ZNF319	93	41.912
ENSATEG00000019026	gfi1aa	53	33.036	ENSATEG00000004944	-	56	33.036
ENSATEG00000019026	gfi1aa	63	38.728	ENSATEG00000011212	-	66	38.728
ENSATEG00000019026	gfi1aa	54	40.719	ENSATEG00000013829	prdm5	78	40.719
ENSATEG00000019026	gfi1aa	55	43.119	ENSATEG00000018931	-	87	43.119
ENSATEG00000019026	gfi1aa	53	48.305	ENSATEG00000014239	-	87	48.305
ENSATEG00000019026	gfi1aa	65	37.267	ENSATEG00000024549	-	53	37.267
ENSATEG00000019026	gfi1aa	57	41.104	ENSATEG00000006085	-	83	41.104
ENSATEG00000019026	gfi1aa	100	57.402	ENSATEG00000002534	gfi1b	100	57.402
ENSATEG00000019026	gfi1aa	56	40.310	ENSATEG00000019378	-	59	40.310
ENSATEG00000019026	gfi1aa	52	45.342	ENSATEG00000003344	-	70	45.342
ENSATEG00000019026	gfi1aa	68	41.304	ENSATEG00000019718	znf526	53	41.304
ENSATEG00000019026	gfi1aa	60	40.000	ENSATEG00000015206	znf646	59	40.000
ENSATEG00000019026	gfi1aa	54	44.720	ENSATEG00000009436	-	84	44.720
ENSATEG00000019026	gfi1aa	53	46.753	ENSATEG00000002726	-	72	46.753
ENSATEG00000019026	gfi1aa	52	44.828	ENSATEG00000007658	-	67	44.828
ENSATEG00000019026	gfi1aa	61	42.667	ENSATEG00000010859	-	86	42.667
ENSATEG00000019026	gfi1aa	62	45.455	ENSATEG00000024503	znf236	59	45.455
ENSATEG00000019026	gfi1aa	55	39.259	ENSATEG00000002302	scrt1b	52	39.259
ENSATEG00000019026	gfi1aa	100	36.441	ENSATEG00000006892	snai2	98	36.441
ENSATEG00000019026	gfi1aa	74	46.914	ENSATEG00000015238	-	71	46.914
ENSATEG00000019026	gfi1aa	55	39.394	ENSATEG00000000589	znf652	77	39.394
ENSATEG00000019026	gfi1aa	53	39.583	ENSATEG00000019261	-	81	39.735
ENSATEG00000019026	gfi1aa	62	41.905	ENSATEG00000011221	-	55	41.905
ENSATEG00000019026	gfi1aa	54	44.248	ENSATEG00000021602	-	67	44.248
ENSATEG00000019026	gfi1aa	76	43.590	ENSATEG00000010560	-	86	42.857
ENSATEG00000019026	gfi1aa	61	44.048	ENSATEG00000008320	-	86	44.048
ENSATEG00000019026	gfi1aa	52	35.354	ENSATEG00000015828	-	65	35.354
ENSATEG00000019026	gfi1aa	55	41.912	ENSATEG00000009345	znf319b	84	41.912
ENSATEG00000019026	gfi1aa	88	41.875	ENSATEG00000011195	-	67	41.875
ENSATEG00000019026	gfi1aa	77	40.964	ENSATEG00000004127	-	96	41.259
ENSATEG00000019026	gfi1aa	63	43.704	ENSATEG00000011202	-	57	43.704
ENSATEG00000019026	gfi1aa	100	39.286	ENSATEG00000023998	scrt2	95	39.286
ENSATEG00000019026	gfi1aa	62	46.358	ENSATEG00000001815	-	97	46.358
ENSATEG00000019026	gfi1aa	53	39.634	ENSATEG00000007325	-	80	40.580
ENSATEG00000019026	gfi1aa	53	44.025	ENSATEG00000018195	-	93	42.857
ENSATEG00000019026	gfi1aa	52	43.750	ENSATEG00000011115	-	98	44.304
ENSATEG00000019026	gfi1aa	62	43.972	ENSATEG00000022064	-	100	43.452
ENSATEG00000019026	gfi1aa	88	72.428	ENSATEG00000009167	gfi1ab	89	59.406
ENSATEG00000019026	gfi1aa	52	45.399	ENSATEG00000017618	-	89	45.399
ENSATEG00000019026	gfi1aa	96	38.509	ENSATEG00000011235	-	86	38.509

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000019026	gfi1aa	99	91.892	ENSAPOG00000005043	gfi1aa	100	87.250	Acanthochromis_polyacanthus
ENSATEG00000019026	gfi1aa	98	87.900	ENSACIG00000021378	gfi1aa	100	83.000	Amphilophus_citrinellus
ENSATEG00000019026	gfi1aa	99	91.892	ENSAOCG00000022957	gfi1aa	100	86.500	Amphiprion_ocellaris
ENSATEG00000019026	gfi1aa	99	91.892	ENSAPEG00000014539	gfi1aa	100	86.750	Amphiprion_percula
ENSATEG00000019026	gfi1aa	100	87.018	ENSACLG00000008641	gfi1aa	100	84.250	Astatotilapia_calliptera
ENSATEG00000019026	gfi1aa	100	63.184	ENSDARG00000020746	gfi1aa	100	63.184	Danio_rerio
ENSATEG00000019026	gfi1aa	100	87.018	ENSHBUG00000007389	gfi1aa	100	81.500	Haplochromis_burtoni
ENSATEG00000019026	gfi1aa	99	82.051	ENSKMAG00000002148	gfi1aa	100	76.750	Kryptolebias_marmoratus
ENSATEG00000019026	gfi1aa	99	84.099	ENSLBEG00000006603	gfi1aa	100	79.353	Labrus_bergylta
ENSATEG00000019026	gfi1aa	99	88.571	ENSMAMG00000004896	gfi1aa	100	81.250	Mastacembelus_armatus
ENSATEG00000019026	gfi1aa	100	87.018	ENSMZEG00005004578	gfi1aa	100	84.250	Maylandia_zebra
ENSATEG00000019026	gfi1aa	100	77.177	ENSMMOG00000006167	gfi1aa	99	79.592	Mola_mola
ENSATEG00000019026	gfi1aa	99	87.900	ENSNBRG00000002673	gfi1aa	100	84.000	Neolamprologus_brichardi
ENSATEG00000019026	gfi1aa	99	87.544	ENSPNYG00000002189	gfi1aa	100	81.750	Pundamilia_nyererei
ENSATEG00000019026	gfi1aa	99	83.681	ENSSMAG00000006797	gfi1aa	100	80.098	Scophthalmus_maximus
ENSATEG00000019026	gfi1aa	99	89.046	ENSSDUG00000011654	gfi1aa	100	85.821	Seriola_dumerili
ENSATEG00000019026	gfi1aa	99	88.732	ENSSLDG00000016512	gfi1aa	100	82.878	Seriola_lalandi_dorsalis
ENSATEG00000019026	gfi1aa	81	91.892	ENSSPAG00000000927	gfi1aa	94	84.211	Stegastes_partitus
ENSATEG00000019026	gfi1aa	100	81.560	ENSTRUG00000004744	gfi1aa	100	77.556	Takifugu_rubripes