EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000019181 (Gene tree)
Gene ID: 113172478
Gene Symbol: hfm1
Alias: si:ch211-83f14.5
Full Name: HFM1%2C ATP-dependent DNA helicase homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 10628 bases
Position: chrOOHO01000003.1:17876885-17887512
Accession: ZDB-GENE-061207-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000027835	ResIII	PF04851.15	5e-11	1	1
ENSATEP00000027835	DEAD	PF00270.29	4.5e-27	1	1
ENSATEP00000027747	DEAD	PF00270.29	2.2e-14	1	1
ENSATEP00000027788	DEAD	PF00270.29	2.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000028185	-	4727	-	ENSATEP00000027747	1138 (aa)	-	-
ENSATET00000028273	-	4241	-	ENSATEP00000027835	1241 (aa)	-	-
ENSATET00000028226	-	4374	-	ENSATEP00000027788	1176 (aa)	-	-

Gene Model

Click here to download ENSATEG00000019181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000019181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000019181	hfm1	53	32.238	ENSATEG00000024950	ascc3	57	32.238
ENSATEG00000019181	hfm1	67	31.533	ENSATEG00000022522	snrnp200	72	31.409

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000019181	hfm1	80	63.537	ENSG00000162669	HFM1	67	64.396	Homo_sapiens
ENSATEG00000019181	hfm1	72	90.634	ENSAPOG00000005304	hfm1	99	88.168	Acanthochromis_polyacanthus
ENSATEG00000019181	hfm1	80	63.716	ENSAMEG00000000432	HFM1	66	64.566	Ailuropoda_melanoleuca
ENSATEG00000019181	hfm1	94	74.064	ENSACIG00000021553	hfm1	95	75.067	Amphilophus_citrinellus
ENSATEG00000019181	hfm1	67	91.207	ENSAOCG00000022839	hfm1	96	91.414	Amphiprion_ocellaris
ENSATEG00000019181	hfm1	67	91.842	ENSAPEG00000014316	hfm1	96	92.025	Amphiprion_percula
ENSATEG00000019181	hfm1	81	62.299	ENSAPLG00000013639	HFM1	67	63.174	Anas_platyrhynchos
ENSATEG00000019181	hfm1	80	62.336	ENSANAG00000029513	HFM1	66	63.261	Aotus_nancymaae
ENSATEG00000019181	hfm1	93	72.710	ENSACLG00000009033	hfm1	96	82.992	Astatotilapia_calliptera
ENSATEG00000019181	hfm1	99	62.025	ENSAMXG00000006108	hfm1	84	62.025	Astyanax_mexicanus
ENSATEG00000019181	hfm1	80	64.176	ENSBTAG00000020856	HFM1	66	64.773	Bos_taurus
ENSATEG00000019181	hfm1	80	63.388	ENSCJAG00000001843	HFM1	67	64.256	Callithrix_jacchus
ENSATEG00000019181	hfm1	91	58.607	ENSCAFG00000020187	HFM1	72	59.598	Canis_familiaris
ENSATEG00000019181	hfm1	80	63.319	ENSTSYG00000014250	HFM1	67	64.050	Carlito_syrichta
ENSATEG00000019181	hfm1	80	62.295	ENSCPOG00000007421	HFM1	68	63.223	Cavia_porcellus
ENSATEG00000019181	hfm1	80	62.882	ENSCCAG00000033206	HFM1	67	63.740	Cebus_capucinus
ENSATEG00000019181	hfm1	84	60.825	ENSCATG00000030987	HFM1	70	61.779	Cercocebus_atys
ENSATEG00000019181	hfm1	91	57.799	ENSCLAG00000005173	HFM1	71	58.652	Chinchilla_lanigera
ENSATEG00000019181	hfm1	58	52.906	ENSCSAVG00000005094	-	100	52.507	Ciona_savignyi
ENSATEG00000019181	hfm1	80	60.022	ENSCGRG00001016995	Hfm1	67	60.379	Cricetulus_griseus_chok1gshd
ENSATEG00000019181	hfm1	80	61.538	ENSCGRG00000017181	Hfm1	67	62.243	Cricetulus_griseus_crigri
ENSATEG00000019181	hfm1	87	79.758	ENSCSEG00000017659	hfm1	96	80.309	Cynoglossus_semilaevis
ENSATEG00000019181	hfm1	62	83.404	ENSCVAG00000005075	hfm1	86	83.404	Cyprinodon_variegatus
ENSATEG00000019181	hfm1	71	71.552	ENSDARG00000104288	hfm1	78	72.486	Danio_rerio
ENSATEG00000019181	hfm1	91	58.142	ENSDNOG00000004776	HFM1	81	52.590	Dasypus_novemcinctus
ENSATEG00000019181	hfm1	80	62.065	ENSDORG00000014661	Hfm1	68	61.111	Dipodomys_ordii
ENSATEG00000019181	hfm1	91	57.005	ENSEASG00005015424	HFM1	96	57.782	Equus_asinus_asinus
ENSATEG00000019181	hfm1	99	54.603	ENSECAG00000024039	HFM1	82	54.603	Equus_caballus
ENSATEG00000019181	hfm1	75	76.834	ENSELUG00000018944	hfm1	97	78.060	Esox_lucius
ENSATEG00000019181	hfm1	80	63.716	ENSFCAG00000029116	HFM1	66	64.463	Felis_catus
ENSATEG00000019181	hfm1	80	63.198	ENSFALG00000001781	HFM1	66	64.041	Ficedula_albicollis
ENSATEG00000019181	hfm1	99	54.452	ENSFDAG00000020816	HFM1	82	54.452	Fukomys_damarensis
ENSATEG00000019181	hfm1	80	73.465	ENSGMOG00000017436	hfm1	100	74.404	Gadus_morhua
ENSATEG00000019181	hfm1	90	78.330	ENSGAFG00000018093	hfm1	99	78.936	Gambusia_affinis
ENSATEG00000019181	hfm1	80	80.832	ENSGACG00000015686	hfm1	100	81.573	Gasterosteus_aculeatus
ENSATEG00000019181	hfm1	80	63.428	ENSGGOG00000038524	HFM1	67	64.293	Gorilla_gorilla
ENSATEG00000019181	hfm1	93	73.654	ENSHBUG00000007309	hfm1	97	74.686	Haplochromis_burtoni
ENSATEG00000019181	hfm1	67	80.577	ENSHCOG00000019632	hfm1	97	81.227	Hippocampus_comes
ENSATEG00000019181	hfm1	85	67.835	ENSIPUG00000017020	hfm1	92	73.333	Ictalurus_punctatus
ENSATEG00000019181	hfm1	80	61.530	ENSJJAG00000017198	Hfm1	68	62.500	Jaculus_jaculus
ENSATEG00000019181	hfm1	74	79.484	ENSKMAG00000002282	hfm1	91	79.912	Kryptolebias_marmoratus
ENSATEG00000019181	hfm1	86	81.623	ENSLBEG00000006759	hfm1	95	85.783	Labrus_bergylta
ENSATEG00000019181	hfm1	82	64.643	ENSLACG00000010698	HFM1	99	61.735	Latimeria_chalumnae
ENSATEG00000019181	hfm1	91	65.150	ENSLOCG00000004931	hfm1	94	66.206	Lepisosteus_oculatus
ENSATEG00000019181	hfm1	54	70.492	ENSLAFG00000015903	-	90	70.492	Loxodonta_africana
ENSATEG00000019181	hfm1	80	60.152	ENSMFAG00000003649	HFM1	67	61.191	Macaca_fascicularis
ENSATEG00000019181	hfm1	80	63.169	ENSMMUG00000006819	HFM1	67	64.050	Macaca_mulatta
ENSATEG00000019181	hfm1	68	91.299	ENSMAMG00000004623	hfm1	93	91.299	Mastacembelus_armatus
ENSATEG00000019181	hfm1	93	72.710	ENSMZEG00005004679	hfm1	96	82.992	Maylandia_zebra
ENSATEG00000019181	hfm1	68	66.968	ENSMGAG00000008437	HFM1	96	66.968	Meleagris_gallopavo
ENSATEG00000019181	hfm1	80	61.768	ENSMAUG00000018858	Hfm1	81	52.381	Mesocricetus_auratus
ENSATEG00000019181	hfm1	80	63.210	ENSMICG00000037935	HFM1	66	64.087	Microcebus_murinus
ENSATEG00000019181	hfm1	84	59.649	ENSMOCG00000014812	Hfm1	71	60.665	Microtus_ochrogaster
ENSATEG00000019181	hfm1	73	82.747	ENSMMOG00000006148	hfm1	93	85.919	Mola_mola
ENSATEG00000019181	hfm1	87	83.352	ENSMALG00000002401	hfm1	98	83.962	Monopterus_albus
ENSATEG00000019181	hfm1	82	74.576	MGP_CAROLIEiJ_G0027496	Hfm1	69	74.576	Mus_caroli
ENSATEG00000019181	hfm1	80	61.900	ENSMUSG00000043410	Hfm1	67	62.436	Mus_musculus
ENSATEG00000019181	hfm1	91	57.461	MGP_PahariEiJ_G0017268	Hfm1	73	58.249	Mus_pahari
ENSATEG00000019181	hfm1	93	55.335	MGP_SPRETEiJ_G0028495	Hfm1	67	63.223	Mus_spretus
ENSATEG00000019181	hfm1	99	54.016	ENSMPUG00000004594	HFM1	82	54.016	Mustela_putorius_furo
ENSATEG00000019181	hfm1	84	60.451	ENSMLUG00000010200	HFM1	70	61.419	Myotis_lucifugus
ENSATEG00000019181	hfm1	92	70.465	ENSNBRG00000002910	hfm1	97	84.102	Neolamprologus_brichardi
ENSATEG00000019181	hfm1	80	60.501	ENSNLEG00000010285	HFM1	67	61.523	Nomascus_leucogenys
ENSATEG00000019181	hfm1	73	58.071	ENSMEUG00000015788	HFM1	61	59.459	Notamacropus_eugenii
ENSATEG00000019181	hfm1	68	61.282	ENSOPRG00000013916	HFM1	58	62.260	Ochotona_princeps
ENSATEG00000019181	hfm1	89	77.112	ENSONIG00000010590	hfm1	98	78.189	Oreochromis_niloticus
ENSATEG00000019181	hfm1	67	81.053	ENSORLG00000026844	hfm1	99	81.897	Oryzias_latipes
ENSATEG00000019181	hfm1	79	69.103	ENSORLG00020002951	hfm1	77	69.650	Oryzias_latipes_hni
ENSATEG00000019181	hfm1	99	67.093	ENSOMEG00000016474	hfm1	83	67.093	Oryzias_melastigma
ENSATEG00000019181	hfm1	80	63.348	ENSOGAG00000032369	HFM1	78	64.426	Otolemur_garnettii
ENSATEG00000019181	hfm1	80	63.497	ENSOARG00000015812	HFM1	67	64.463	Ovis_aries
ENSATEG00000019181	hfm1	80	63.755	ENSPPAG00000024582	HFM1	72	64.603	Pan_paniscus
ENSATEG00000019181	hfm1	80	63.607	ENSPPRG00000003270	HFM1	66	64.153	Panthera_pardus
ENSATEG00000019181	hfm1	80	63.716	ENSPTIG00000018881	HFM1	66	64.463	Panthera_tigris_altaica
ENSATEG00000019181	hfm1	80	63.646	ENSPTRG00000000948	HFM1	67	64.499	Pan_troglodytes
ENSATEG00000019181	hfm1	80	63.060	ENSPANG00000009838	HFM1	67	63.946	Papio_anubis
ENSATEG00000019181	hfm1	74	71.682	ENSPKIG00000003810	hfm1	95	72.960	Paramormyrops_kingsleyae
ENSATEG00000019181	hfm1	68	78.913	ENSPMGG00000011059	hfm1	100	79.419	Periophthalmus_magnuspinnatus
ENSATEG00000019181	hfm1	84	59.649	ENSPEMG00000022852	Hfm1	70	60.665	Peromyscus_maniculatus_bairdii
ENSATEG00000019181	hfm1	99	53.676	ENSPCIG00000014233	HFM1	82	53.676	Phascolarctos_cinereus
ENSATEG00000019181	hfm1	91	72.814	ENSPFOG00000017194	hfm1	99	73.822	Poecilia_formosa
ENSATEG00000019181	hfm1	85	79.955	ENSPLAG00000000571	hfm1	92	80.573	Poecilia_latipinna
ENSATEG00000019181	hfm1	85	79.553	ENSPMEG00000019475	hfm1	93	80.190	Poecilia_mexicana
ENSATEG00000019181	hfm1	87	79.402	ENSPREG00000007803	hfm1	96	80.063	Poecilia_reticulata
ENSATEG00000019181	hfm1	80	63.428	ENSPPYG00000001163	HFM1	67	64.293	Pongo_abelii
ENSATEG00000019181	hfm1	79	57.650	ENSPVAG00000009713	HFM1	67	58.848	Pteropus_vampyrus
ENSATEG00000019181	hfm1	93	72.521	ENSPNYG00000001795	hfm1	96	83.112	Pundamilia_nyererei
ENSATEG00000019181	hfm1	69	74.122	ENSPNAG00000010865	hfm1	85	74.122	Pygocentrus_nattereri
ENSATEG00000019181	hfm1	80	61.894	ENSRNOG00000023299	Hfm1	66	62.955	Rattus_norvegicus
ENSATEG00000019181	hfm1	80	63.169	ENSRROG00000045569	HFM1	67	64.050	Rhinopithecus_roxellana
ENSATEG00000019181	hfm1	80	63.319	ENSSBOG00000027456	HFM1	68	64.190	Saimiri_boliviensis_boliviensis
ENSATEG00000019181	hfm1	99	62.441	ENSSFOG00015020129	hfm1	83	62.441	Scleropages_formosus
ENSATEG00000019181	hfm1	74	86.588	ENSSMAG00000006907	hfm1	89	86.255	Scophthalmus_maximus
ENSATEG00000019181	hfm1	68	88.357	ENSSDUG00000011424	hfm1	93	88.554	Seriola_dumerili
ENSATEG00000019181	hfm1	68	87.984	ENSSLDG00000016386	hfm1	92	88.634	Seriola_lalandi_dorsalis
ENSATEG00000019181	hfm1	93	70.538	ENSSPAG00000001023	hfm1	93	87.167	Stegastes_partitus
ENSATEG00000019181	hfm1	91	58.863	ENSSSCG00000006912	HFM1	77	59.853	Sus_scrofa
ENSATEG00000019181	hfm1	80	62.664	ENSTGUG00000006172	HFM1	99	63.533	Taeniopygia_guttata
ENSATEG00000019181	hfm1	80	62.842	ENSTTRG00000013933	HFM1	67	63.843	Tursiops_truncatus
ENSATEG00000019181	hfm1	80	61.530	ENSVPAG00000011331	HFM1	67	62.397	Vicugna_pacos
ENSATEG00000019181	hfm1	91	56.963	ENSVVUG00000020760	HFM1	98	57.743	Vulpes_vulpes
ENSATEG00000019181	hfm1	67	81.842	ENSXMAG00000004178	hfm1	91	81.630	Xiphophorus_maculatus