EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000019877 (Gene tree)
Gene ID: 113157065
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 14799 bases
Position: chrOOHO01000015.1:4093335-4108133
Accession: 113157065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	1	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	2	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	3	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	4	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	5	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	6	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	7	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	8	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	9	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	10	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	11	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	12	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	13	14
ENSATEP00000028956	KH_1	PF00013.29	2.1e-186	14	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	1	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	2	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	3	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	4	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	5	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	6	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	7	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	8	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	9	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	10	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	11	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	12	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	13	14
ENSATEP00000028910	KH_1	PF00013.29	1.8e-185	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000029400	-	3735	-	ENSATEP00000028956	1244 (aa)	-	-
ENSATET00000029354	-	4026	-	ENSATEP00000028910	1268 (aa)	XP_026208089	UPI000E45D812

Gene Model

Click here to download ENSATEG00000019877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000019877's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000019877	hdlbpb	100	71.406	ENSATEG00000009748	hdlbpa	100	71.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000019877	hdlbpb	100	96.924	ENSAPOG00000006904	hdlbpb	100	96.924	Acanthochromis_polyacanthus
ENSATEG00000019877	hdlbpb	100	91.825	ENSACIG00000016154	hdlbpb	100	91.825	Amphilophus_citrinellus
ENSATEG00000019877	hdlbpb	100	97.476	ENSAOCG00000004083	hdlbpb	100	97.476	Amphiprion_ocellaris
ENSATEG00000019877	hdlbpb	100	97.397	ENSAPEG00000012270	hdlbpb	100	97.397	Amphiprion_percula
ENSATEG00000019877	hdlbpb	100	82.194	ENSACAG00000003606	-	100	82.194	Anolis_carolinensis
ENSATEG00000019877	hdlbpb	100	96.372	ENSACLG00000006618	hdlbpb	100	96.372	Astatotilapia_calliptera
ENSATEG00000019877	hdlbpb	100	77.953	ENSAMXG00000019946	hdlbpb	100	77.953	Astyanax_mexicanus
ENSATEG00000019877	hdlbpb	100	94.874	ENSCSEG00000000955	hdlbpb	100	94.874	Cynoglossus_semilaevis
ENSATEG00000019877	hdlbpb	100	95.505	ENSCVAG00000005345	hdlbpb	100	95.505	Cyprinodon_variegatus
ENSATEG00000019877	hdlbpb	99	85.635	ENSDARG00000061864	hdlbpb	99	85.635	Danio_rerio
ENSATEG00000019877	hdlbpb	97	68.495	ENSEBUG00000005304	hdlbpb	94	71.129	Eptatretus_burgeri
ENSATEG00000019877	hdlbpb	100	78.257	ENSELUG00000019925	hdlbpb	100	78.414	Esox_lucius
ENSATEG00000019877	hdlbpb	88	34.322	ENSFHEG00000001701	hdlbpb	100	90.379	Fundulus_heteroclitus
ENSATEG00000019877	hdlbpb	96	88.076	ENSGMOG00000004522	hdlbpb	78	88.076	Gadus_morhua
ENSATEG00000019877	hdlbpb	100	95.584	ENSGAFG00000005278	hdlbpb	100	95.584	Gambusia_affinis
ENSATEG00000019877	hdlbpb	99	92.265	ENSGACG00000019361	hdlbpb	100	92.502	Gasterosteus_aculeatus
ENSATEG00000019877	hdlbpb	100	96.215	ENSHBUG00000018434	hdlbpb	100	96.215	Haplochromis_burtoni
ENSATEG00000019877	hdlbpb	100	84.791	ENSIPUG00000003291	HDLBP	100	85.340	Ictalurus_punctatus
ENSATEG00000019877	hdlbpb	100	95.899	ENSKMAG00000016562	hdlbpb	100	95.899	Kryptolebias_marmoratus
ENSATEG00000019877	hdlbpb	100	96.530	ENSLBEG00000027855	hdlbpb	100	96.530	Labrus_bergylta
ENSATEG00000019877	hdlbpb	100	85.189	ENSLACG00000007661	hdlbpb	90	85.189	Latimeria_chalumnae
ENSATEG00000019877	hdlbpb	100	83.002	ENSLOCG00000013909	hdlbpb	100	83.002	Lepisosteus_oculatus
ENSATEG00000019877	hdlbpb	100	96.767	ENSMAMG00000003035	hdlbpb	100	96.767	Mastacembelus_armatus
ENSATEG00000019877	hdlbpb	100	96.372	ENSMZEG00005021465	hdlbpb	100	96.372	Maylandia_zebra
ENSATEG00000019877	hdlbpb	100	95.032	ENSMMOG00000012525	hdlbpb	100	95.347	Mola_mola
ENSATEG00000019877	hdlbpb	100	94.401	ENSMALG00000008938	hdlbpb	100	94.401	Monopterus_albus
ENSATEG00000019877	hdlbpb	100	96.451	ENSNBRG00000002236	hdlbpb	100	96.451	Neolamprologus_brichardi
ENSATEG00000019877	hdlbpb	100	96.136	ENSONIG00000009211	hdlbpb	100	96.136	Oreochromis_niloticus
ENSATEG00000019877	hdlbpb	100	94.558	ENSORLG00000006581	hdlbpb	100	94.558	Oryzias_latipes
ENSATEG00000019877	hdlbpb	100	94.637	ENSORLG00020010012	hdlbpb	100	94.637	Oryzias_latipes_hni
ENSATEG00000019877	hdlbpb	100	94.874	ENSORLG00015006863	hdlbpb	100	94.874	Oryzias_latipes_hsok
ENSATEG00000019877	hdlbpb	100	95.426	ENSOMEG00000011131	hdlbpb	100	95.426	Oryzias_melastigma
ENSATEG00000019877	hdlbpb	100	88.880	ENSPKIG00000005966	hdlbpb	100	88.959	Paramormyrops_kingsleyae
ENSATEG00000019877	hdlbpb	86	93.056	ENSPMGG00000019853	hdlbpb	99	93.056	Periophthalmus_magnuspinnatus
ENSATEG00000019877	hdlbpb	93	67.808	ENSPMAG00000000249	-	99	67.763	Petromyzon_marinus
ENSATEG00000019877	hdlbpb	95	74.342	ENSPMAG00000002131	hdlbpb	100	74.452	Petromyzon_marinus
ENSATEG00000019877	hdlbpb	100	94.852	ENSPFOG00000008755	hdlbpb	100	94.852	Poecilia_formosa
ENSATEG00000019877	hdlbpb	100	95.899	ENSPLAG00000007055	hdlbpb	100	95.899	Poecilia_latipinna
ENSATEG00000019877	hdlbpb	100	95.820	ENSPMEG00000001952	hdlbpb	100	95.820	Poecilia_mexicana
ENSATEG00000019877	hdlbpb	100	95.741	ENSPREG00000012848	hdlbpb	100	95.741	Poecilia_reticulata
ENSATEG00000019877	hdlbpb	100	96.215	ENSPNYG00000022467	hdlbpb	100	96.215	Pundamilia_nyererei
ENSATEG00000019877	hdlbpb	100	87.382	ENSPNAG00000011104	hdlbpb	100	87.382	Pygocentrus_nattereri
ENSATEG00000019877	hdlbpb	100	87.855	ENSSFOG00015023199	hdlbpb	100	87.855	Scleropages_formosus
ENSATEG00000019877	hdlbpb	100	96.372	ENSSMAG00000008790	hdlbpb	100	96.372	Scophthalmus_maximus
ENSATEG00000019877	hdlbpb	100	97.082	ENSSDUG00000020694	hdlbpb	100	97.082	Seriola_dumerili
ENSATEG00000019877	hdlbpb	100	96.609	ENSSLDG00000020807	hdlbpb	100	96.609	Seriola_lalandi_dorsalis
ENSATEG00000019877	hdlbpb	100	82.671	ENSSPUG00000018688	-	100	82.671	Sphenodon_punctatus
ENSATEG00000019877	hdlbpb	100	97.161	ENSSPAG00000016969	hdlbpb	100	97.161	Stegastes_partitus
ENSATEG00000019877	hdlbpb	98	92.716	ENSTRUG00000012888	hdlbpb	99	92.637	Takifugu_rubripes
ENSATEG00000019877	hdlbpb	99	93.657	ENSTNIG00000002555	hdlbpb	100	93.657	Tetraodon_nigroviridis
ENSATEG00000019877	hdlbpb	100	84.110	ENSXCOG00000001797	hdlbpb	100	84.110	Xiphophorus_couchianus
ENSATEG00000019877	hdlbpb	100	95.268	ENSXMAG00000015633	hdlbpb	100	95.268	Xiphophorus_maculatus