EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000020210 (Gene tree)
Gene ID: 113168843
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 4667 bases
Position: chrOOHO01000006.1:21779907-21784573
Accession: 113168843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000029278	zf-U11-48K	PF05253.12	6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000029723	-	1938	XM_026369874	ENSATEP00000029278	333 (aa)	XP_026225659	UPI000E460483

Gene Model

Click here to download ENSATEG00000020210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000020210's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000020210	snrnp48	81	49.643	ENSG00000168566	SNRNP48	77	50.000	Homo_sapiens
ENSATEG00000020210	snrnp48	95	82.298	ENSAPOG00000021430	snrnp48	94	81.931	Acanthochromis_polyacanthus
ENSATEG00000020210	snrnp48	80	50.542	ENSAMEG00000017349	SNRNP48	78	50.554	Ailuropoda_melanoleuca
ENSATEG00000020210	snrnp48	94	73.968	ENSACIG00000002032	snrnp48	92	74.051	Amphilophus_citrinellus
ENSATEG00000020210	snrnp48	95	81.132	ENSAOCG00000010562	snrnp48	93	80.503	Amphiprion_ocellaris
ENSATEG00000020210	snrnp48	95	80.503	ENSAPEG00000003231	snrnp48	93	79.874	Amphiprion_percula
ENSATEG00000020210	snrnp48	84	49.301	ENSACAG00000002811	SNRNP48	62	56.219	Anolis_carolinensis
ENSATEG00000020210	snrnp48	81	49.286	ENSANAG00000033538	SNRNP48	77	49.632	Aotus_nancymaae
ENSATEG00000020210	snrnp48	95	58.750	ENSAMXG00000015309	snrnp48	95	59.062	Astyanax_mexicanus
ENSATEG00000020210	snrnp48	80	48.929	ENSBTAG00000001123	SNRNP48	82	49.310	Bos_taurus
ENSATEG00000020210	snrnp48	81	50.000	ENSCJAG00000021330	SNRNP48	77	50.368	Callithrix_jacchus
ENSATEG00000020210	snrnp48	84	48.311	ENSCAFG00000009574	SNRNP48	68	46.713	Canis_familiaris
ENSATEG00000020210	snrnp48	89	46.645	ENSCAFG00020013203	SNRNP48	82	47.405	Canis_lupus_dingo
ENSATEG00000020210	snrnp48	80	48.929	ENSCHIG00000015216	SNRNP48	82	49.655	Capra_hircus
ENSATEG00000020210	snrnp48	81	49.286	ENSTSYG00000000698	SNRNP48	77	49.632	Carlito_syrichta
ENSATEG00000020210	snrnp48	76	48.473	ENSCAPG00000006768	SNRNP48	79	48.819	Cavia_aperea
ENSATEG00000020210	snrnp48	81	50.000	ENSCPOG00000007910	SNRNP48	77	50.368	Cavia_porcellus
ENSATEG00000020210	snrnp48	81	49.643	ENSCCAG00000035652	SNRNP48	77	50.000	Cebus_capucinus
ENSATEG00000020210	snrnp48	84	49.324	ENSCATG00000033947	SNRNP48	77	50.000	Cercocebus_atys
ENSATEG00000020210	snrnp48	81	49.643	ENSCLAG00000003765	SNRNP48	77	50.000	Chinchilla_lanigera
ENSATEG00000020210	snrnp48	81	50.000	ENSCSAG00000007409	SNRNP48	77	50.368	Chlorocebus_sabaeus
ENSATEG00000020210	snrnp48	80	49.117	ENSCPBG00000019146	SNRNP48	75	51.867	Chrysemys_picta_bellii
ENSATEG00000020210	snrnp48	81	49.286	ENSCANG00000030017	SNRNP48	77	49.632	Colobus_angolensis_palliatus
ENSATEG00000020210	snrnp48	84	41.581	ENSCGRG00001008805	-	72	44.635	Cricetulus_griseus_chok1gshd
ENSATEG00000020210	snrnp48	81	48.214	ENSCGRG00001001076	-	77	48.529	Cricetulus_griseus_chok1gshd
ENSATEG00000020210	snrnp48	81	48.214	ENSCGRG00000007781	Snrnp48	77	48.529	Cricetulus_griseus_crigri
ENSATEG00000020210	snrnp48	75	74.603	ENSCSEG00000000722	snrnp48	86	71.287	Cynoglossus_semilaevis
ENSATEG00000020210	snrnp48	99	72.917	ENSCVAG00000019829	snrnp48	73	79.505	Cyprinodon_variegatus
ENSATEG00000020210	snrnp48	95	51.818	ENSDARG00000039989	snrnp48	81	54.417	Danio_rerio
ENSATEG00000020210	snrnp48	81	49.123	ENSDNOG00000014978	SNRNP48	95	44.214	Dasypus_novemcinctus
ENSATEG00000020210	snrnp48	92	44.807	ENSDORG00000015140	Snrnp48	77	49.817	Dipodomys_ordii
ENSATEG00000020210	snrnp48	82	48.944	ENSEASG00005012021	SNRNP48	78	49.275	Equus_asinus_asinus
ENSATEG00000020210	snrnp48	87	45.574	ENSECAG00000026937	SNRNP48	83	47.902	Equus_caballus
ENSATEG00000020210	snrnp48	81	33.452	ENSEEUG00000015437	SNRNP48	71	33.333	Erinaceus_europaeus
ENSATEG00000020210	snrnp48	84	63.732	ENSELUG00000009766	snrnp48	77	64.286	Esox_lucius
ENSATEG00000020210	snrnp48	81	48.929	ENSFCAG00000018853	SNRNP48	77	49.265	Felis_catus
ENSATEG00000020210	snrnp48	71	56.017	ENSFALG00000007797	SNRNP48	64	58.911	Ficedula_albicollis
ENSATEG00000020210	snrnp48	81	50.000	ENSFDAG00000009231	SNRNP48	91	45.171	Fukomys_damarensis
ENSATEG00000020210	snrnp48	67	80.973	ENSFHEG00000014647	snrnp48	94	80.741	Fundulus_heteroclitus
ENSATEG00000020210	snrnp48	91	62.975	ENSGMOG00000018599	-	78	72.177	Gadus_morhua
ENSATEG00000020210	snrnp48	86	49.495	ENSGALG00000013005	SNRNP48	70	57.416	Gallus_gallus
ENSATEG00000020210	snrnp48	94	75.078	ENSGAFG00000021639	snrnp48	93	74.143	Gambusia_affinis
ENSATEG00000020210	snrnp48	74	79.518	ENSGACG00000017756	-	96	73.684	Gasterosteus_aculeatus
ENSATEG00000020210	snrnp48	80	48.410	ENSGAGG00000000865	SNRNP48	67	54.589	Gopherus_agassizii
ENSATEG00000020210	snrnp48	81	50.000	ENSGGOG00000013220	SNRNP48	77	50.368	Gorilla_gorilla
ENSATEG00000020210	snrnp48	94	79.683	ENSHBUG00000017066	snrnp48	90	81.029	Haplochromis_burtoni
ENSATEG00000020210	snrnp48	81	49.643	ENSHGLG00000015241	SNRNP48	77	50.000	Heterocephalus_glaber_female
ENSATEG00000020210	snrnp48	81	49.643	ENSHGLG00100010027	SNRNP48	77	50.000	Heterocephalus_glaber_male
ENSATEG00000020210	snrnp48	81	71.014	ENSHCOG00000014066	snrnp48	93	69.375	Hippocampus_comes
ENSATEG00000020210	snrnp48	81	50.000	ENSSTOG00000014635	SNRNP48	77	49.632	Ictidomys_tridecemlineatus
ENSATEG00000020210	snrnp48	82	48.592	ENSJJAG00000011495	Snrnp48	72	52.033	Jaculus_jaculus
ENSATEG00000020210	snrnp48	92	79.153	ENSKMAG00000016514	snrnp48	91	78.641	Kryptolebias_marmoratus
ENSATEG00000020210	snrnp48	82	78.909	ENSLBEG00000026249	snrnp48	93	79.365	Labrus_bergylta
ENSATEG00000020210	snrnp48	99	47.989	ENSLACG00000003958	SNRNP48	74	52.778	Latimeria_chalumnae
ENSATEG00000020210	snrnp48	84	60.702	ENSLOCG00000004187	snrnp48	93	56.740	Lepisosteus_oculatus
ENSATEG00000020210	snrnp48	81	48.043	ENSLAFG00000011152	SNRNP48	71	51.029	Loxodonta_africana
ENSATEG00000020210	snrnp48	81	50.000	ENSMFAG00000045216	SNRNP48	77	50.368	Macaca_fascicularis
ENSATEG00000020210	snrnp48	81	50.000	ENSMMUG00000014785	SNRNP48	77	50.368	Macaca_mulatta
ENSATEG00000020210	snrnp48	81	50.000	ENSMNEG00000042269	SNRNP48	77	50.368	Macaca_nemestrina
ENSATEG00000020210	snrnp48	81	50.000	ENSMLEG00000034004	SNRNP48	77	50.368	Mandrillus_leucophaeus
ENSATEG00000020210	snrnp48	93	80.707	ENSMAMG00000018673	snrnp48	80	80.386	Mastacembelus_armatus
ENSATEG00000020210	snrnp48	81	50.338	ENSMGAG00000006037	SNRNP48	67	58.911	Meleagris_gallopavo
ENSATEG00000020210	snrnp48	81	48.929	ENSMAUG00000011944	Snrnp48	71	51.240	Mesocricetus_auratus
ENSATEG00000020210	snrnp48	80	49.821	ENSMICG00000012497	SNRNP48	91	44.720	Microcebus_murinus
ENSATEG00000020210	snrnp48	81	49.822	ENSMOCG00000015555	Snrnp48	71	52.263	Microtus_ochrogaster
ENSATEG00000020210	snrnp48	56	84.737	ENSMMOG00000003072	-	60	84.737	Mola_mola
ENSATEG00000020210	snrnp48	85	46.780	ENSMODG00000009996	SNRNP48	78	46.713	Monodelphis_domestica
ENSATEG00000020210	snrnp48	94	82.911	ENSMALG00000005725	snrnp48	93	82.278	Monopterus_albus
ENSATEG00000020210	snrnp48	81	48.571	MGP_CAROLIEiJ_G0018441	Snrnp48	77	48.897	Mus_caroli
ENSATEG00000020210	snrnp48	84	47.797	ENSMUSG00000021431	Snrnp48	82	48.084	Mus_musculus
ENSATEG00000020210	snrnp48	81	50.357	MGP_PahariEiJ_G0019509	Snrnp48	77	49.632	Mus_pahari
ENSATEG00000020210	snrnp48	81	49.643	MGP_SPRETEiJ_G0019321	Snrnp48	77	49.265	Mus_spretus
ENSATEG00000020210	snrnp48	92	44.940	ENSNGAG00000004849	Snrnp48	71	52.479	Nannospalax_galili
ENSATEG00000020210	snrnp48	94	79.683	ENSNBRG00000012127	snrnp48	90	81.029	Neolamprologus_brichardi
ENSATEG00000020210	snrnp48	81	50.000	ENSNLEG00000011667	SNRNP48	77	50.368	Nomascus_leucogenys
ENSATEG00000020210	snrnp48	80	47.826	ENSOPRG00000015471	SNRNP48	88	46.853	Ochotona_princeps
ENSATEG00000020210	snrnp48	94	80.317	ENSONIG00000001520	snrnp48	90	81.672	Oreochromis_niloticus
ENSATEG00000020210	snrnp48	52	38.693	ENSOANG00000019888	-	96	39.303	Ornithorhynchus_anatinus
ENSATEG00000020210	snrnp48	80	48.921	ENSOCUG00000005168	SNRNP48	87	49.638	Oryctolagus_cuniculus
ENSATEG00000020210	snrnp48	88	79.661	ENSORLG00000015654	snrnp48	91	80.063	Oryzias_latipes
ENSATEG00000020210	snrnp48	88	78.571	ENSORLG00020015976	snrnp48	78	79.114	Oryzias_latipes_hni
ENSATEG00000020210	snrnp48	88	79.252	ENSORLG00015022379	snrnp48	79	79.747	Oryzias_latipes_hsok
ENSATEG00000020210	snrnp48	94	78.344	ENSOMEG00000022007	snrnp48	92	77.460	Oryzias_melastigma
ENSATEG00000020210	snrnp48	80	49.462	ENSOGAG00000005275	SNRNP48	82	48.410	Otolemur_garnettii
ENSATEG00000020210	snrnp48	72	50.204	ENSOARG00000017319	SNRNP48	71	53.623	Ovis_aries
ENSATEG00000020210	snrnp48	81	50.000	ENSPPAG00000032873	SNRNP48	77	50.368	Pan_paniscus
ENSATEG00000020210	snrnp48	81	48.929	ENSPPRG00000004283	SNRNP48	77	49.265	Panthera_pardus
ENSATEG00000020210	snrnp48	71	50.628	ENSPTIG00000013502	SNRNP48	77	51.082	Panthera_tigris_altaica
ENSATEG00000020210	snrnp48	81	50.000	ENSPTRG00000017703	SNRNP48	77	50.368	Pan_troglodytes
ENSATEG00000020210	snrnp48	81	50.000	ENSPANG00000000771	SNRNP48	77	50.368	Papio_anubis
ENSATEG00000020210	snrnp48	93	55.193	ENSPKIG00000013703	snrnp48	58	62.868	Paramormyrops_kingsleyae
ENSATEG00000020210	snrnp48	84	47.079	ENSPSIG00000002213	SNRNP48	65	53.810	Pelodiscus_sinensis
ENSATEG00000020210	snrnp48	80	62.774	ENSPMGG00000008120	snrnp48	91	65.759	Periophthalmus_magnuspinnatus
ENSATEG00000020210	snrnp48	92	46.057	ENSPEMG00000008872	Snrnp48	77	50.000	Peromyscus_maniculatus_bairdii
ENSATEG00000020210	snrnp48	94	76.324	ENSPFOG00000003578	snrnp48	93	75.701	Poecilia_formosa
ENSATEG00000020210	snrnp48	69	81.466	ENSPLAG00000002290	snrnp48	91	75.479	Poecilia_latipinna
ENSATEG00000020210	snrnp48	94	76.324	ENSPMEG00000018033	snrnp48	93	75.701	Poecilia_mexicana
ENSATEG00000020210	snrnp48	74	81.124	ENSPREG00000018541	snrnp48	93	75.078	Poecilia_reticulata
ENSATEG00000020210	snrnp48	81	49.643	ENSPPYG00000016209	SNRNP48	77	50.000	Pongo_abelii
ENSATEG00000020210	snrnp48	72	37.255	ENSPCAG00000011991	SNRNP48	91	40.081	Procavia_capensis
ENSATEG00000020210	snrnp48	84	48.611	ENSPVAG00000002854	SNRNP48	80	48.214	Pteropus_vampyrus
ENSATEG00000020210	snrnp48	92	80.323	ENSPNYG00000015399	snrnp48	97	81.639	Pundamilia_nyererei
ENSATEG00000020210	snrnp48	92	44.643	ENSRNOG00000013756	Snrnp48	77	50.000	Rattus_norvegicus
ENSATEG00000020210	snrnp48	81	50.000	ENSRBIG00000043856	SNRNP48	83	50.368	Rhinopithecus_bieti
ENSATEG00000020210	snrnp48	81	50.000	ENSRROG00000043229	SNRNP48	77	50.368	Rhinopithecus_roxellana
ENSATEG00000020210	snrnp48	81	50.357	ENSSBOG00000019486	SNRNP48	77	50.735	Saimiri_boliviensis_boliviensis
ENSATEG00000020210	snrnp48	84	47.458	ENSSHAG00000014483	SNRNP48	82	47.569	Sarcophilus_harrisii
ENSATEG00000020210	snrnp48	73	62.055	ENSSFOG00015006610	snrnp48	69	60.345	Scleropages_formosus
ENSATEG00000020210	snrnp48	88	81.757	ENSSDUG00000014953	snrnp48	92	81.847	Seriola_dumerili
ENSATEG00000020210	snrnp48	88	81.757	ENSSLDG00000005989	snrnp48	92	81.847	Seriola_lalandi_dorsalis
ENSATEG00000020210	snrnp48	83	50.352	ENSSPUG00000006257	SNRNP48	68	52.479	Sphenodon_punctatus
ENSATEG00000020210	snrnp48	93	83.067	ENSSPAG00000006454	snrnp48	92	83.067	Stegastes_partitus
ENSATEG00000020210	snrnp48	78	50.530	ENSTGUG00000007575	SNRNP48	64	59.204	Taeniopygia_guttata
ENSATEG00000020210	snrnp48	74	76.190	ENSTRUG00000007031	snrnp48	92	71.698	Takifugu_rubripes
ENSATEG00000020210	snrnp48	98	66.970	ENSTNIG00000012977	-	92	67.913	Tetraodon_nigroviridis
ENSATEG00000020210	snrnp48	71	51.613	ENSTBEG00000015620	SNRNP48	72	51.639	Tupaia_belangeri
ENSATEG00000020210	snrnp48	80	49.462	ENSTTRG00000016715	SNRNP48	72	53.036	Tursiops_truncatus
ENSATEG00000020210	snrnp48	81	49.821	ENSUAMG00000003690	SNRNP48	77	50.185	Ursus_americanus
ENSATEG00000020210	snrnp48	71	49.794	ENSVPAG00000003557	SNRNP48	71	53.140	Vicugna_pacos
ENSATEG00000020210	snrnp48	81	48.929	ENSVVUG00000004996	SNRNP48	77	49.265	Vulpes_vulpes
ENSATEG00000020210	snrnp48	90	46.865	ENSXETG00000020447	snrnp48	71	50.420	Xenopus_tropicalis
ENSATEG00000020210	snrnp48	69	81.116	ENSXCOG00000004478	snrnp48	93	69.876	Xiphophorus_couchianus
ENSATEG00000020210	snrnp48	94	76.087	ENSXMAG00000013595	snrnp48	93	75.466	Xiphophorus_maculatus