EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000020219 (Gene tree)
Gene ID: 113169249
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 10120 bases
Position: chrOOHO01000006.1:28891026-28901145
Accession: ZDB-GENE-010601-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000029387	tRNA-synt_1g	PF09334.11	1.4e-12	1	1
ENSATEP00000029387	Anticodon_1	PF08264.13	9.4e-31	1	1
ENSATEP00000029387	tRNA-synt_1	PF00133.22	7e-207	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000029833	-	3696	-	ENSATEP00000029387	1231 (aa)	-	-

Gene Model

Click here to download ENSATEG00000020219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000020219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000020219	vars	78	49.540	ENSATEG00000012291	vars2	90	49.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000020219	vars	100	64.145	ENSG00000204394	VARS	99	71.472	Homo_sapiens
ENSATEG00000020219	vars	98	88.788	ENSAPOG00000020921	vars	99	88.046	Acanthochromis_polyacanthus
ENSATEG00000020219	vars	98	88.788	ENSAPOG00000020691	vars	99	88.046	Acanthochromis_polyacanthus
ENSATEG00000020219	vars	100	64.567	ENSAMEG00000006417	VARS	100	64.724	Ailuropoda_melanoleuca
ENSATEG00000020219	vars	100	88.278	ENSACIG00000013752	vars	100	88.278	Amphilophus_citrinellus
ENSATEG00000020219	vars	100	89.807	ENSAOCG00000002447	vars	100	89.807	Amphiprion_ocellaris
ENSATEG00000020219	vars	100	88.016	ENSAPEG00000010638	vars	99	87.608	Amphiprion_percula
ENSATEG00000020219	vars	89	68.728	ENSACAG00000029133	-	99	69.852	Anolis_carolinensis
ENSATEG00000020219	vars	100	64.381	ENSANAG00000015453	VARS	100	64.618	Aotus_nancymaae
ENSATEG00000020219	vars	100	87.334	ENSACLG00000025699	vars	97	87.334	Astatotilapia_calliptera
ENSATEG00000020219	vars	96	81.948	ENSAMXG00000017716	vars	96	81.192	Astyanax_mexicanus
ENSATEG00000020219	vars	100	64.539	ENSBTAG00000005631	VARS	100	63.922	Bos_taurus
ENSATEG00000020219	vars	100	63.987	ENSCJAG00000002604	VARS	100	64.224	Callithrix_jacchus
ENSATEG00000020219	vars	100	64.381	ENSCAFG00000000636	VARS	100	63.608	Canis_familiaris
ENSATEG00000020219	vars	94	65.601	ENSCAFG00020020790	VARS	96	64.770	Canis_lupus_dingo
ENSATEG00000020219	vars	100	64.381	ENSCHIG00000011008	VARS	100	63.765	Capra_hircus
ENSATEG00000020219	vars	100	64.201	ENSTSYG00000001567	VARS	100	64.437	Carlito_syrichta
ENSATEG00000020219	vars	91	67.456	ENSCAPG00000013736	VARS	98	67.456	Cavia_aperea
ENSATEG00000020219	vars	100	64.016	ENSCPOG00000000870	VARS	100	64.016	Cavia_porcellus
ENSATEG00000020219	vars	100	64.224	ENSCCAG00000035656	VARS	100	64.539	Cebus_capucinus
ENSATEG00000020219	vars	100	64.409	ENSCATG00000022394	VARS	100	64.803	Cercocebus_atys
ENSATEG00000020219	vars	93	63.380	ENSCLAG00000009470	VARS	97	62.479	Chinchilla_lanigera
ENSATEG00000020219	vars	100	64.252	ENSCSAG00000008784	VARS	100	64.646	Chlorocebus_sabaeus
ENSATEG00000020219	vars	79	73.700	ENSCPBG00000007943	VARS	96	74.407	Chrysemys_picta_bellii
ENSATEG00000020219	vars	100	64.409	ENSCANG00000033570	VARS	100	64.803	Colobus_angolensis_palliatus
ENSATEG00000020219	vars	100	64.224	ENSCGRG00001005686	Vars	100	64.539	Cricetulus_griseus_chok1gshd
ENSATEG00000020219	vars	93	62.239	ENSCGRG00000013352	Vars	78	62.573	Cricetulus_griseus_crigri
ENSATEG00000020219	vars	100	83.894	ENSCSEG00000019652	vars	100	83.974	Cynoglossus_semilaevis
ENSATEG00000020219	vars	100	86.005	ENSCVAG00000022398	vars	100	86.396	Cyprinodon_variegatus
ENSATEG00000020219	vars	100	80.893	ENSDARG00000044575	vars	100	80.893	Danio_rerio
ENSATEG00000020219	vars	84	69.216	ENSDORG00000016433	Vars	93	68.476	Dipodomys_ordii
ENSATEG00000020219	vars	65	74.453	ENSETEG00000003824	VARS	76	74.453	Echinops_telfairi
ENSATEG00000020219	vars	52	72.855	ENSEBUG00000007086	vars	81	72.855	Eptatretus_burgeri
ENSATEG00000020219	vars	58	64.883	ENSEBUG00000004637	vars	100	64.883	Eptatretus_burgeri
ENSATEG00000020219	vars	100	65.012	ENSEASG00005015673	VARS	100	65.248	Equus_asinus_asinus
ENSATEG00000020219	vars	100	65.091	ENSECAG00000014620	VARS	100	65.354	Equus_caballus
ENSATEG00000020219	vars	71	71.429	ENSEEUG00000004116	VARS	73	71.429	Erinaceus_europaeus
ENSATEG00000020219	vars	100	81.060	ENSELUG00000006550	vars	97	81.060	Esox_lucius
ENSATEG00000020219	vars	100	64.618	ENSFCAG00000004510	VARS	100	63.843	Felis_catus
ENSATEG00000020219	vars	82	70.370	ENSFDAG00000011401	VARS	100	69.121	Fukomys_damarensis
ENSATEG00000020219	vars	100	86.742	ENSFHEG00000010672	vars	100	86.742	Fundulus_heteroclitus
ENSATEG00000020219	vars	100	77.838	ENSGMOG00000014908	vars	100	78.227	Gadus_morhua
ENSATEG00000020219	vars	100	85.748	ENSGAFG00000021630	vars	100	86.061	Gambusia_affinis
ENSATEG00000020219	vars	93	86.745	ENSGACG00000009601	vars	100	83.099	Gasterosteus_aculeatus
ENSATEG00000020219	vars	100	64.066	ENSGGOG00000011364	VARS	100	64.488	Gorilla_gorilla
ENSATEG00000020219	vars	100	87.334	ENSHBUG00000017151	vars	97	87.334	Haplochromis_burtoni
ENSATEG00000020219	vars	100	63.830	ENSHGLG00000011646	VARS	100	63.137	Heterocephalus_glaber_female
ENSATEG00000020219	vars	94	60.770	ENSHGLG00100018062	VARS	99	60.348	Heterocephalus_glaber_male
ENSATEG00000020219	vars	99	81.897	ENSHCOG00000012198	vars	99	81.975	Hippocampus_comes
ENSATEG00000020219	vars	100	81.315	ENSIPUG00000005218	vars	100	81.395	Ictalurus_punctatus
ENSATEG00000020219	vars	100	64.724	ENSSTOG00000013112	VARS	100	65.039	Ictidomys_tridecemlineatus
ENSATEG00000020219	vars	100	64.516	ENSJJAG00000019749	-	100	64.516	Jaculus_jaculus
ENSATEG00000020219	vars	100	52.782	ENSJJAG00000015343	-	98	55.012	Jaculus_jaculus
ENSATEG00000020219	vars	100	86.667	ENSKMAG00000009455	vars	100	86.667	Kryptolebias_marmoratus
ENSATEG00000020219	vars	100	88.350	ENSLBEG00000010341	vars	100	88.350	Labrus_bergylta
ENSATEG00000020219	vars	94	62.975	ENSLACG00000015232	VARS	99	64.327	Latimeria_chalumnae
ENSATEG00000020219	vars	100	72.598	ENSLOCG00000004240	vars	100	72.756	Lepisosteus_oculatus
ENSATEG00000020219	vars	100	63.909	ENSLAFG00000023090	VARS	100	64.409	Loxodonta_africana
ENSATEG00000020219	vars	100	64.409	ENSMFAG00000001032	VARS	100	64.803	Macaca_fascicularis
ENSATEG00000020219	vars	100	64.409	ENSMMUG00000006828	VARS	100	64.803	Macaca_mulatta
ENSATEG00000020219	vars	100	64.409	ENSMNEG00000042072	VARS	100	64.803	Macaca_nemestrina
ENSATEG00000020219	vars	100	64.331	ENSMLEG00000039307	VARS	100	64.724	Mandrillus_leucophaeus
ENSATEG00000020219	vars	100	88.763	ENSMAMG00000003949	vars	100	88.763	Mastacembelus_armatus
ENSATEG00000020219	vars	100	87.334	ENSMZEG00005018327	vars	100	87.318	Maylandia_zebra
ENSATEG00000020219	vars	100	63.987	ENSMAUG00000006715	Vars	100	64.303	Mesocricetus_auratus
ENSATEG00000020219	vars	100	64.145	ENSMICG00000003548	VARS	100	64.303	Microcebus_murinus
ENSATEG00000020219	vars	100	63.262	ENSMOCG00000015404	Vars	100	63.737	Microtus_ochrogaster
ENSATEG00000020219	vars	100	86.273	ENSMMOG00000015801	vars	100	86.273	Mola_mola
ENSATEG00000020219	vars	100	64.483	ENSMODG00000015204	-	100	64.697	Monodelphis_domestica
ENSATEG00000020219	vars	99	88.808	ENSMALG00000022532	vars	99	88.808	Monopterus_albus
ENSATEG00000020219	vars	100	64.539	MGP_CAROLIEiJ_G0021491	Vars	100	65.039	Mus_caroli
ENSATEG00000020219	vars	100	64.381	ENSMUSG00000007029	Vars	100	64.882	Mus_musculus
ENSATEG00000020219	vars	100	64.224	MGP_PahariEiJ_G0020486	Vars	100	64.539	Mus_pahari
ENSATEG00000020219	vars	100	64.460	MGP_SPRETEiJ_G0022396	Vars	100	64.961	Mus_spretus
ENSATEG00000020219	vars	100	64.539	ENSMPUG00000010821	VARS	100	64.697	Mustela_putorius_furo
ENSATEG00000020219	vars	78	67.104	ENSMLUG00000013126	VARS	100	67.104	Myotis_lucifugus
ENSATEG00000020219	vars	100	64.303	ENSNGAG00000012151	Vars	100	64.724	Nannospalax_galili
ENSATEG00000020219	vars	100	87.379	ENSNBRG00000020520	vars	100	87.379	Neolamprologus_brichardi
ENSATEG00000020219	vars	100	64.224	ENSNLEG00000006351	VARS	100	64.460	Nomascus_leucogenys
ENSATEG00000020219	vars	100	62.451	ENSMEUG00000011378	VARS	100	62.904	Notamacropus_eugenii
ENSATEG00000020219	vars	100	64.618	ENSOPRG00000003607	VARS	100	64.854	Ochotona_princeps
ENSATEG00000020219	vars	100	63.615	ENSODEG00000017681	VARS	100	63.830	Octodon_degus
ENSATEG00000020219	vars	100	88.031	ENSONIG00000013064	vars	100	88.271	Oreochromis_niloticus
ENSATEG00000020219	vars	76	66.507	ENSOANG00000005400	VARS	98	66.507	Ornithorhynchus_anatinus
ENSATEG00000020219	vars	100	63.241	ENSOCUG00000022463	VARS	100	63.162	Oryctolagus_cuniculus
ENSATEG00000020219	vars	100	84.227	ENSORLG00000013063	vars	100	84.382	Oryzias_latipes
ENSATEG00000020219	vars	100	84.387	ENSORLG00020003504	vars	100	84.856	Oryzias_latipes_hni
ENSATEG00000020219	vars	100	84.297	ENSORLG00015009001	vars	100	85.000	Oryzias_latipes_hsok
ENSATEG00000020219	vars	100	84.688	ENSOMEG00000015016	vars	100	85.000	Oryzias_melastigma
ENSATEG00000020219	vars	100	64.331	ENSOGAG00000007515	VARS	100	63.558	Otolemur_garnettii
ENSATEG00000020219	vars	100	64.224	ENSPPAG00000034012	VARS	100	64.460	Pan_paniscus
ENSATEG00000020219	vars	100	64.697	ENSPPRG00000014855	VARS	100	63.922	Panthera_pardus
ENSATEG00000020219	vars	85	68.721	ENSPTIG00000010462	VARS	97	65.408	Panthera_tigris_altaica
ENSATEG00000020219	vars	100	64.145	ENSPTRG00000017985	VARS	100	64.381	Pan_troglodytes
ENSATEG00000020219	vars	100	62.833	ENSPANG00000014565	VARS	100	63.224	Papio_anubis
ENSATEG00000020219	vars	100	77.933	ENSPKIG00000016304	vars	100	77.933	Paramormyrops_kingsleyae
ENSATEG00000020219	vars	100	84.683	ENSPMGG00000023909	vars	100	84.763	Periophthalmus_magnuspinnatus
ENSATEG00000020219	vars	100	63.830	ENSPEMG00000006639	Vars	100	64.145	Peromyscus_maniculatus_bairdii
ENSATEG00000020219	vars	100	64.246	ENSPCIG00000018553	VARS	100	64.460	Phascolarctos_cinereus
ENSATEG00000020219	vars	100	85.513	ENSPFOG00000015690	vars	100	85.826	Poecilia_formosa
ENSATEG00000020219	vars	100	85.600	ENSPLAG00000009590	vars	100	85.748	Poecilia_latipinna
ENSATEG00000020219	vars	100	85.435	ENSPMEG00000004708	vars	100	85.748	Poecilia_mexicana
ENSATEG00000020219	vars	100	86.151	ENSPREG00000013264	vars	100	86.071	Poecilia_reticulata
ENSATEG00000020219	vars	100	63.112	ENSPPYG00000016460	VARS	100	63.220	Pongo_abelii
ENSATEG00000020219	vars	85	66.667	ENSPCAG00000013565	VARS	86	66.667	Procavia_capensis
ENSATEG00000020219	vars	100	64.224	ENSPCOG00000010942	VARS	100	64.488	Propithecus_coquereli
ENSATEG00000020219	vars	100	61.781	ENSPVAG00000012403	VARS	100	62.362	Pteropus_vampyrus
ENSATEG00000020219	vars	100	87.412	ENSPNYG00000022511	vars	100	87.412	Pundamilia_nyererei
ENSATEG00000020219	vars	100	81.206	ENSPNAG00000020962	vars	100	81.206	Pygocentrus_nattereri
ENSATEG00000020219	vars	100	64.280	ENSRNOG00000000867	Vars	100	64.673	Rattus_norvegicus
ENSATEG00000020219	vars	100	64.331	ENSRBIG00000041669	VARS	100	64.724	Rhinopithecus_bieti
ENSATEG00000020219	vars	100	64.331	ENSRROG00000045490	VARS	100	64.724	Rhinopithecus_roxellana
ENSATEG00000020219	vars	100	64.303	ENSSBOG00000035402	VARS	100	64.539	Saimiri_boliviensis_boliviensis
ENSATEG00000020219	vars	100	62.839	ENSSHAG00000006937	VARS	100	63.887	Sarcophilus_harrisii
ENSATEG00000020219	vars	100	77.510	ENSSFOG00015014272	vars	100	77.510	Scleropages_formosus
ENSATEG00000020219	vars	100	84.922	ENSSMAG00000009596	vars	99	84.922	Scophthalmus_maximus
ENSATEG00000020219	vars	100	88.516	ENSSDUG00000014177	vars	100	88.750	Seriola_dumerili
ENSATEG00000020219	vars	100	87.891	ENSSLDG00000025316	vars	100	88.125	Seriola_lalandi_dorsalis
ENSATEG00000020219	vars	100	90.276	ENSSPAG00000017068	vars	100	90.276	Stegastes_partitus
ENSATEG00000020219	vars	100	63.909	ENSSSCG00000038950	VARS	100	64.173	Sus_scrofa
ENSATEG00000020219	vars	82	82.066	ENSTRUG00000012307	vars	98	82.039	Takifugu_rubripes
ENSATEG00000020219	vars	100	83.491	ENSTNIG00000008011	vars	100	83.570	Tetraodon_nigroviridis
ENSATEG00000020219	vars	100	59.432	ENSTTRG00000014128	VARS	100	59.037	Tursiops_truncatus
ENSATEG00000020219	vars	100	62.353	ENSUAMG00000010424	VARS	100	62.510	Ursus_americanus
ENSATEG00000020219	vars	100	58.451	ENSUMAG00000013486	VARS	100	58.740	Ursus_maritimus
ENSATEG00000020219	vars	100	64.711	ENSVVUG00000021323	VARS	100	63.931	Vulpes_vulpes
ENSATEG00000020219	vars	100	63.565	ENSXETG00000024076	vars	100	63.365	Xenopus_tropicalis
ENSATEG00000020219	vars	100	85.259	ENSXCOG00000019172	vars	100	85.578	Xiphophorus_couchianus
ENSATEG00000020219	vars	100	85.121	ENSXMAG00000010927	vars	100	85.435	Xiphophorus_maculatus