EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000020435 (Gene tree)
Gene ID: 113172901
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 12083 bases
Position: chrOOHO01000008.1:3776464-3788546
Accession: 113172901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000029707	SF3b1	PF08920.10	3.2e-47	1	1
ENSATEP00000029692	SF3b1	PF08920.10	3.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000030140	-	4562	XM_026375969	ENSATEP00000029692	1314 (aa)	XP_026231754	UPI000E45F1F3
ENSATET00000030156	-	4213	-	ENSATEP00000029707	1313 (aa)	-	-

Gene Model

Click here to download ENSATEG00000020435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000020435's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000020435	sf3b1	100	93.693	ENSG00000115524	SF3B1	100	93.693	Homo_sapiens
ENSATEG00000020435	sf3b1	100	99.240	ENSAPOG00000011894	sf3b1	100	99.240	Acanthochromis_polyacanthus
ENSATEG00000020435	sf3b1	99	93.640	ENSAMEG00000013809	SF3B1	99	93.640	Ailuropoda_melanoleuca
ENSATEG00000020435	sf3b1	100	97.641	ENSACIG00000020910	sf3b1	97	97.641	Amphilophus_citrinellus
ENSATEG00000020435	sf3b1	100	99.240	ENSAOCG00000004478	sf3b1	100	99.240	Amphiprion_ocellaris
ENSATEG00000020435	sf3b1	100	99.240	ENSAPEG00000012937	sf3b1	100	99.240	Amphiprion_percula
ENSATEG00000020435	sf3b1	99	94.009	ENSAPLG00000003993	SF3B1	99	94.009	Anas_platyrhynchos
ENSATEG00000020435	sf3b1	100	93.840	ENSACAG00000009612	SF3B1	100	93.840	Anolis_carolinensis
ENSATEG00000020435	sf3b1	100	93.693	ENSANAG00000021577	SF3B1	100	94.949	Aotus_nancymaae
ENSATEG00000020435	sf3b1	100	97.641	ENSACLG00000023470	sf3b1	100	97.641	Astatotilapia_calliptera
ENSATEG00000020435	sf3b1	100	97.340	ENSAMXG00000002219	sf3b1	100	97.340	Astyanax_mexicanus
ENSATEG00000020435	sf3b1	100	93.693	ENSBTAG00000008915	SF3B1	100	93.693	Bos_taurus
ENSATEG00000020435	sf3b1	98	65.217	WBGene00011605	sftb-1	97	65.367	Caenorhabditis_elegans
ENSATEG00000020435	sf3b1	100	93.693	ENSCJAG00000003902	SF3B1	100	93.693	Callithrix_jacchus
ENSATEG00000020435	sf3b1	100	93.693	ENSCAFG00000010826	SF3B1	100	93.693	Canis_familiaris
ENSATEG00000020435	sf3b1	100	93.693	ENSCAFG00020004750	SF3B1	100	93.693	Canis_lupus_dingo
ENSATEG00000020435	sf3b1	100	93.693	ENSCHIG00000015226	SF3B1	100	93.693	Capra_hircus
ENSATEG00000020435	sf3b1	100	93.617	ENSTSYG00000009214	SF3B1	100	93.617	Carlito_syrichta
ENSATEG00000020435	sf3b1	99	93.583	ENSCAPG00000006547	SF3B1	99	93.583	Cavia_aperea
ENSATEG00000020435	sf3b1	99	93.707	ENSCPOG00000009353	SF3B1	100	93.645	Cavia_porcellus
ENSATEG00000020435	sf3b1	100	93.693	ENSCCAG00000020506	SF3B1	100	93.693	Cebus_capucinus
ENSATEG00000020435	sf3b1	100	93.693	ENSCATG00000035735	SF3B1	100	93.693	Cercocebus_atys
ENSATEG00000020435	sf3b1	99	93.712	ENSCLAG00000014767	SF3B1	99	93.712	Chinchilla_lanigera
ENSATEG00000020435	sf3b1	100	93.693	ENSCSAG00000011505	SF3B1	100	93.693	Chlorocebus_sabaeus
ENSATEG00000020435	sf3b1	76	92.588	ENSCHOG00000009860	SF3B1	76	92.588	Choloepus_hoffmanni
ENSATEG00000020435	sf3b1	100	93.988	ENSCPBG00000021902	SF3B1	99	95.105	Chrysemys_picta_bellii
ENSATEG00000020435	sf3b1	69	77.620	ENSCING00000002558	-	99	78.232	Ciona_intestinalis
ENSATEG00000020435	sf3b1	99	79.759	ENSCSAVG00000002559	-	99	79.744	Ciona_savignyi
ENSATEG00000020435	sf3b1	100	93.693	ENSCANG00000029415	SF3B1	100	93.693	Colobus_angolensis_palliatus
ENSATEG00000020435	sf3b1	100	93.693	ENSCGRG00001016990	Sf3b1	100	93.693	Cricetulus_griseus_chok1gshd
ENSATEG00000020435	sf3b1	100	93.693	ENSCGRG00000005301	Sf3b1	100	93.693	Cricetulus_griseus_crigri
ENSATEG00000020435	sf3b1	100	94.444	ENSCSEG00000003860	sf3b1	100	94.444	Cynoglossus_semilaevis
ENSATEG00000020435	sf3b1	96	98.416	ENSCVAG00000003680	sf3b1	99	98.416	Cyprinodon_variegatus
ENSATEG00000020435	sf3b1	100	96.046	ENSDARG00000056138	sf3b1	100	96.046	Danio_rerio
ENSATEG00000020435	sf3b1	100	93.622	ENSDNOG00000011754	SF3B1	100	93.622	Dasypus_novemcinctus
ENSATEG00000020435	sf3b1	99	91.865	ENSDORG00000002399	Sf3b1	100	91.730	Dipodomys_ordii
ENSATEG00000020435	sf3b1	100	75.880	FBgn0031266	Sf3b1	100	75.880	Drosophila_melanogaster
ENSATEG00000020435	sf3b1	83	92.477	ENSETEG00000009188	SF3B1	100	92.477	Echinops_telfairi
ENSATEG00000020435	sf3b1	99	85.856	ENSEBUG00000004325	sf3b1	100	88.630	Eptatretus_burgeri
ENSATEG00000020435	sf3b1	100	93.693	ENSEASG00005020159	SF3B1	98	93.693	Equus_asinus_asinus
ENSATEG00000020435	sf3b1	100	93.693	ENSECAG00000021657	SF3B1	98	93.693	Equus_caballus
ENSATEG00000020435	sf3b1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSATEG00000020435	sf3b1	100	96.526	ENSELUG00000005977	sf3b1	98	96.593	Esox_lucius
ENSATEG00000020435	sf3b1	100	93.693	ENSFCAG00000005038	SF3B1	100	93.693	Felis_catus
ENSATEG00000020435	sf3b1	99	93.932	ENSFALG00000004281	SF3B1	99	93.932	Ficedula_albicollis
ENSATEG00000020435	sf3b1	100	93.693	ENSFDAG00000017510	SF3B1	100	93.693	Fukomys_damarensis
ENSATEG00000020435	sf3b1	100	97.643	ENSFHEG00000014333	sf3b1	100	97.643	Fundulus_heteroclitus
ENSATEG00000020435	sf3b1	100	96.735	ENSGMOG00000006773	sf3b1	100	96.735	Gadus_morhua
ENSATEG00000020435	sf3b1	100	93.988	ENSGALG00000008038	SF3B1	100	93.988	Gallus_gallus
ENSATEG00000020435	sf3b1	98	98.607	ENSGAFG00000000704	sf3b1	100	98.533	Gambusia_affinis
ENSATEG00000020435	sf3b1	100	97.416	ENSGACG00000008839	sf3b1	100	97.416	Gasterosteus_aculeatus
ENSATEG00000020435	sf3b1	100	93.348	ENSGAGG00000017478	SF3B1	100	93.348	Gopherus_agassizii
ENSATEG00000020435	sf3b1	99	88.565	ENSGGOG00000009264	SF3B1	99	88.565	Gorilla_gorilla
ENSATEG00000020435	sf3b1	99	97.713	ENSHBUG00000007705	sf3b1	99	97.713	Haplochromis_burtoni
ENSATEG00000020435	sf3b1	99	93.712	ENSHGLG00000008285	-	99	93.712	Heterocephalus_glaber_female
ENSATEG00000020435	sf3b1	99	91.718	ENSHGLG00100005535	-	99	91.718	Heterocephalus_glaber_male
ENSATEG00000020435	sf3b1	100	97.277	ENSHCOG00000016775	sf3b1	100	97.277	Hippocampus_comes
ENSATEG00000020435	sf3b1	100	96.882	ENSIPUG00000013171	sf3b1	100	96.882	Ictalurus_punctatus
ENSATEG00000020435	sf3b1	100	93.693	ENSSTOG00000011034	SF3B1	100	93.693	Ictidomys_tridecemlineatus
ENSATEG00000020435	sf3b1	99	93.687	ENSJJAG00000010903	Sf3b1	99	93.687	Jaculus_jaculus
ENSATEG00000020435	sf3b1	100	97.800	ENSKMAG00000004009	sf3b1	100	97.800	Kryptolebias_marmoratus
ENSATEG00000020435	sf3b1	100	97.565	ENSLBEG00000022208	sf3b1	100	97.565	Labrus_bergylta
ENSATEG00000020435	sf3b1	99	90.396	ENSLACG00000014832	SF3B1	99	90.473	Latimeria_chalumnae
ENSATEG00000020435	sf3b1	100	95.761	ENSLOCG00000003899	sf3b1	100	95.761	Lepisosteus_oculatus
ENSATEG00000020435	sf3b1	100	93.693	ENSLAFG00000001956	SF3B1	100	93.693	Loxodonta_africana
ENSATEG00000020435	sf3b1	99	93.712	ENSMMUG00000022430	SF3B1	99	93.712	Macaca_mulatta
ENSATEG00000020435	sf3b1	100	93.693	ENSMNEG00000042333	SF3B1	100	94.949	Macaca_nemestrina
ENSATEG00000020435	sf3b1	94	88.853	ENSMLEG00000026141	SF3B1	98	88.719	Mandrillus_leucophaeus
ENSATEG00000020435	sf3b1	100	99.011	ENSMAMG00000010241	sf3b1	100	99.011	Mastacembelus_armatus
ENSATEG00000020435	sf3b1	100	97.641	ENSMZEG00005021254	sf3b1	100	97.641	Maylandia_zebra
ENSATEG00000020435	sf3b1	99	93.395	ENSMGAG00000007017	SF3B1	99	93.395	Meleagris_gallopavo
ENSATEG00000020435	sf3b1	99	89.494	ENSMAUG00000009071	Sf3b1	99	89.494	Mesocricetus_auratus
ENSATEG00000020435	sf3b1	100	93.693	ENSMICG00000013879	SF3B1	100	93.693	Microcebus_murinus
ENSATEG00000020435	sf3b1	99	89.425	ENSMOCG00000000455	Sf3b1	99	89.425	Microtus_ochrogaster
ENSATEG00000020435	sf3b1	84	98.635	ENSMMOG00000000475	sf3b1	100	98.635	Mola_mola
ENSATEG00000020435	sf3b1	100	93.237	ENSMODG00000012275	SF3B1	100	93.237	Monodelphis_domestica
ENSATEG00000020435	sf3b1	100	98.706	ENSMALG00000017211	sf3b1	100	98.706	Monopterus_albus
ENSATEG00000020435	sf3b1	100	93.693	MGP_CAROLIEiJ_G0014141	Sf3b1	100	93.693	Mus_caroli
ENSATEG00000020435	sf3b1	100	93.693	ENSMUSG00000025982	Sf3b1	100	93.693	Mus_musculus
ENSATEG00000020435	sf3b1	100	93.693	MGP_SPRETEiJ_G0014947	Sf3b1	100	93.693	Mus_spretus
ENSATEG00000020435	sf3b1	100	93.693	ENSMPUG00000007799	SF3B1	100	93.693	Mustela_putorius_furo
ENSATEG00000020435	sf3b1	100	92.553	ENSMLUG00000000840	SF3B1	100	92.553	Myotis_lucifugus
ENSATEG00000020435	sf3b1	99	93.430	ENSNGAG00000021884	-	100	93.369	Nannospalax_galili
ENSATEG00000020435	sf3b1	100	92.928	ENSNBRG00000015816	sf3b1	100	92.928	Neolamprologus_brichardi
ENSATEG00000020435	sf3b1	100	93.693	ENSNLEG00000006861	SF3B1	100	93.693	Nomascus_leucogenys
ENSATEG00000020435	sf3b1	69	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSATEG00000020435	sf3b1	100	81.264	ENSOPRG00000008596	SF3B1	100	81.413	Ochotona_princeps
ENSATEG00000020435	sf3b1	100	93.693	ENSODEG00000011153	-	100	93.693	Octodon_degus
ENSATEG00000020435	sf3b1	100	97.641	ENSONIG00000013758	sf3b1	100	97.641	Oreochromis_niloticus
ENSATEG00000020435	sf3b1	82	96.115	ENSOCUG00000012722	-	96	96.033	Oryctolagus_cuniculus
ENSATEG00000020435	sf3b1	100	97.869	ENSORLG00000020219	sf3b1	100	97.869	Oryzias_latipes
ENSATEG00000020435	sf3b1	100	97.869	ENSORLG00020001746	sf3b1	100	97.869	Oryzias_latipes_hni
ENSATEG00000020435	sf3b1	64	96.441	ENSORLG00015001759	sf3b1	98	96.441	Oryzias_latipes_hsok
ENSATEG00000020435	sf3b1	100	98.023	ENSOMEG00000019231	sf3b1	100	98.023	Oryzias_melastigma
ENSATEG00000020435	sf3b1	100	93.693	ENSOARG00000015374	SF3B1	100	93.693	Ovis_aries
ENSATEG00000020435	sf3b1	100	93.693	ENSPPAG00000035007	SF3B1	100	93.693	Pan_paniscus
ENSATEG00000020435	sf3b1	100	93.693	ENSPPRG00000009090	SF3B1	100	93.693	Panthera_pardus
ENSATEG00000020435	sf3b1	100	93.693	ENSPTIG00000021557	SF3B1	100	93.693	Panthera_tigris_altaica
ENSATEG00000020435	sf3b1	99	86.305	ENSPTRG00000012771	SF3B1	99	86.305	Pan_troglodytes
ENSATEG00000020435	sf3b1	100	93.693	ENSPANG00000013417	SF3B1	100	93.693	Papio_anubis
ENSATEG00000020435	sf3b1	100	96.431	ENSPKIG00000000784	sf3b1	100	96.431	Paramormyrops_kingsleyae
ENSATEG00000020435	sf3b1	99	92.929	ENSPSIG00000017222	SF3B1	98	92.929	Pelodiscus_sinensis
ENSATEG00000020435	sf3b1	91	97.649	ENSPMGG00000004330	sf3b1	99	97.649	Periophthalmus_magnuspinnatus
ENSATEG00000020435	sf3b1	99	93.712	ENSPEMG00000010699	Sf3b1	100	93.650	Peromyscus_maniculatus_bairdii
ENSATEG00000020435	sf3b1	100	88.889	ENSPMAG00000001311	sf3b1	100	89.191	Petromyzon_marinus
ENSATEG00000020435	sf3b1	100	93.237	ENSPCIG00000010642	SF3B1	100	93.237	Phascolarctos_cinereus
ENSATEG00000020435	sf3b1	100	98.632	ENSPFOG00000000073	sf3b1	100	98.632	Poecilia_formosa
ENSATEG00000020435	sf3b1	100	98.783	ENSPLAG00000002293	sf3b1	100	98.783	Poecilia_latipinna
ENSATEG00000020435	sf3b1	100	98.707	ENSPMEG00000000446	sf3b1	98	98.707	Poecilia_mexicana
ENSATEG00000020435	sf3b1	100	98.783	ENSPREG00000019652	sf3b1	100	98.783	Poecilia_reticulata
ENSATEG00000020435	sf3b1	83	96.415	ENSPPYG00000013044	SF3B1	95	96.415	Pongo_abelii
ENSATEG00000020435	sf3b1	100	93.541	ENSPCAG00000009292	SF3B1	100	93.541	Procavia_capensis
ENSATEG00000020435	sf3b1	100	93.693	ENSPCOG00000024074	SF3B1	100	93.693	Propithecus_coquereli
ENSATEG00000020435	sf3b1	100	93.693	ENSPVAG00000008302	SF3B1	100	93.693	Pteropus_vampyrus
ENSATEG00000020435	sf3b1	100	97.565	ENSPNYG00000014939	sf3b1	100	97.565	Pundamilia_nyererei
ENSATEG00000020435	sf3b1	100	97.112	ENSPNAG00000008288	sf3b1	100	97.112	Pygocentrus_nattereri
ENSATEG00000020435	sf3b1	100	93.693	ENSRNOG00000013516	Sf3b1	100	93.693	Rattus_norvegicus
ENSATEG00000020435	sf3b1	99	90.008	ENSRBIG00000026096	SF3B1	100	89.954	Rhinopithecus_bieti
ENSATEG00000020435	sf3b1	100	93.693	ENSRROG00000031308	SF3B1	100	93.693	Rhinopithecus_roxellana
ENSATEG00000020435	sf3b1	100	93.693	ENSSBOG00000020080	SF3B1	100	93.693	Saimiri_boliviensis_boliviensis
ENSATEG00000020435	sf3b1	100	93.237	ENSSHAG00000017564	SF3B1	100	93.237	Sarcophilus_harrisii
ENSATEG00000020435	sf3b1	100	97.034	ENSSFOG00015021535	sf3b1	100	97.034	Scleropages_formosus
ENSATEG00000020435	sf3b1	99	97.800	ENSSMAG00000013977	sf3b1	99	97.800	Scophthalmus_maximus
ENSATEG00000020435	sf3b1	100	99.239	ENSSDUG00000017422	sf3b1	100	99.239	Seriola_dumerili
ENSATEG00000020435	sf3b1	100	99.163	ENSSLDG00000019495	sf3b1	100	99.163	Seriola_lalandi_dorsalis
ENSATEG00000020435	sf3b1	75	98.938	ENSSARG00000007016	SF3B1	75	98.938	Sorex_araneus
ENSATEG00000020435	sf3b1	100	93.760	ENSSPUG00000000410	SF3B1	100	93.760	Sphenodon_punctatus
ENSATEG00000020435	sf3b1	100	98.935	ENSSPAG00000010451	sf3b1	99	98.935	Stegastes_partitus
ENSATEG00000020435	sf3b1	91	93.256	ENSSSCG00000016075	SF3B1	100	94.949	Sus_scrofa
ENSATEG00000020435	sf3b1	100	93.988	ENSTGUG00000010553	SF3B1	100	93.988	Taeniopygia_guttata
ENSATEG00000020435	sf3b1	100	98.326	ENSTRUG00000015534	sf3b1	100	98.326	Takifugu_rubripes
ENSATEG00000020435	sf3b1	84	97.107	ENSTBEG00000008714	SF3B1	93	97.107	Tupaia_belangeri
ENSATEG00000020435	sf3b1	92	93.401	ENSTTRG00000003414	SF3B1	92	93.401	Tursiops_truncatus
ENSATEG00000020435	sf3b1	94	83.902	ENSUAMG00000018506	SF3B1	99	97.963	Ursus_americanus
ENSATEG00000020435	sf3b1	100	93.693	ENSUMAG00000020945	SF3B1	100	93.693	Ursus_maritimus
ENSATEG00000020435	sf3b1	95	93.542	ENSVPAG00000005798	SF3B1	96	93.463	Vicugna_pacos
ENSATEG00000020435	sf3b1	100	93.693	ENSVVUG00000025948	SF3B1	95	93.693	Vulpes_vulpes
ENSATEG00000020435	sf3b1	100	92.325	ENSXETG00000013339	sf3b1	100	92.249	Xenopus_tropicalis
ENSATEG00000020435	sf3b1	100	94.068	ENSXCOG00000018086	sf3b1	100	94.373	Xiphophorus_couchianus
ENSATEG00000020435	sf3b1	100	98.555	ENSXMAG00000007369	sf3b1	100	98.555	Xiphophorus_maculatus