EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000020624 (Gene tree)
Gene ID: 113173138
Gene Symbol: SMARCAL1
Alias: HARP|HHARP
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a like 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 10308 bases
Position: chrOOHO01000008.1:14328727-14339034
Accession: 113173138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000029870	ResIII	PF04851.15	5.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000030325	SMARCAL1-201	5186	-	ENSATEP00000029870	912 (aa)	XP_026232253	UPI000E4659AE

Gene Model

Click here to download ENSATEG00000020624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000020624's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000020624	SMARCAL1	96	51.884	ENSG00000138375	SMARCAL1	99	66.460	Homo_sapiens
ENSATEG00000020624	SMARCAL1	99	81.264	ENSAPOG00000020156	SMARCAL1	99	81.373	Acanthochromis_polyacanthus
ENSATEG00000020624	SMARCAL1	93	85.577	ENSACIG00000001500	smarcal1	97	85.577	Amphilophus_citrinellus
ENSATEG00000020624	SMARCAL1	99	81.457	ENSAOCG00000014266	SMARCAL1	100	81.347	Amphiprion_ocellaris
ENSATEG00000020624	SMARCAL1	99	81.264	ENSAPEG00000015861	SMARCAL1	99	85.259	Amphiprion_percula
ENSATEG00000020624	SMARCAL1	83	59.818	ENSAPLG00000009864	SMARCAL1	78	60.858	Anas_platyrhynchos
ENSATEG00000020624	SMARCAL1	81	61.208	ENSACAG00000004612	SMARCAL1	76	61.208	Anolis_carolinensis
ENSATEG00000020624	SMARCAL1	99	79.121	ENSACLG00000015990	SMARCAL1	99	79.231	Astatotilapia_calliptera
ENSATEG00000020624	SMARCAL1	100	66.848	ENSAMXG00000003350	smarcal1	99	66.848	Astyanax_mexicanus
ENSATEG00000020624	SMARCAL1	79	63.611	ENSCPBG00000013599	SMARCAL1	74	63.611	Chrysemys_picta_bellii
ENSATEG00000020624	SMARCAL1	72	48.906	ENSCING00000009308	-	100	48.594	Ciona_intestinalis
ENSATEG00000020624	SMARCAL1	97	74.637	ENSCSEG00000010785	SMARCAL1	99	74.637	Cynoglossus_semilaevis
ENSATEG00000020624	SMARCAL1	100	72.384	ENSCVAG00000018780	SMARCAL1	100	72.384	Cyprinodon_variegatus
ENSATEG00000020624	SMARCAL1	79	45.298	ENSEBUG00000011906	SMARCAL1	99	45.884	Eptatretus_burgeri
ENSATEG00000020624	SMARCAL1	100	68.319	ENSELUG00000010440	-	100	68.561	Esox_lucius
ENSATEG00000020624	SMARCAL1	97	53.022	ENSFALG00000003981	SMARCAL1	97	53.022	Ficedula_albicollis
ENSATEG00000020624	SMARCAL1	100	74.540	ENSFHEG00000008380	SMARCAL1	100	75.435	Fundulus_heteroclitus
ENSATEG00000020624	SMARCAL1	55	77.069	ENSGMOG00000010034	smarcal1	95	77.069	Gadus_morhua
ENSATEG00000020624	SMARCAL1	97	54.536	ENSGALG00000011475	RPL37A	96	54.536	Gallus_gallus
ENSATEG00000020624	SMARCAL1	81	84.673	ENSGACG00000006073	SMARCAL1	100	86.220	Gasterosteus_aculeatus
ENSATEG00000020624	SMARCAL1	92	54.116	ENSGAGG00000015660	SMARCAL1	98	54.116	Gopherus_agassizii
ENSATEG00000020624	SMARCAL1	99	78.681	ENSHBUG00000002973	smarcal1	99	78.681	Haplochromis_burtoni
ENSATEG00000020624	SMARCAL1	96	72.520	ENSHCOG00000017921	smarcal1	98	72.520	Hippocampus_comes
ENSATEG00000020624	SMARCAL1	97	74.832	ENSKMAG00000012023	SMARCAL1	99	74.944	Kryptolebias_marmoratus
ENSATEG00000020624	SMARCAL1	84	83.379	ENSLBEG00000022915	smarcal1	99	83.175	Labrus_bergylta
ENSATEG00000020624	SMARCAL1	91	78.830	ENSLBEG00000003493	smarcal1	100	78.830	Labrus_bergylta
ENSATEG00000020624	SMARCAL1	100	50.569	ENSLACG00000010974	SMARCAL1	99	50.832	Latimeria_chalumnae
ENSATEG00000020624	SMARCAL1	93	63.860	ENSLOCG00000009637	smarcal1	99	63.860	Lepisosteus_oculatus
ENSATEG00000020624	SMARCAL1	98	80.466	ENSMAMG00000000828	SMARCAL1	99	80.466	Mastacembelus_armatus
ENSATEG00000020624	SMARCAL1	99	79.011	ENSMZEG00005007660	SMARCAL1	99	79.121	Maylandia_zebra
ENSATEG00000020624	SMARCAL1	97	54.723	ENSMGAG00000011658	SMARCAL1	96	54.723	Meleagris_gallopavo
ENSATEG00000020624	SMARCAL1	93	77.689	ENSMMOG00000003842	smarcal1	94	77.689	Mola_mola
ENSATEG00000020624	SMARCAL1	99	51.033	ENSMODG00000015544	SMARCAL1	80	57.732	Monodelphis_domestica
ENSATEG00000020624	SMARCAL1	93	85.873	ENSNBRG00000016273	smarcal1	97	85.873	Neolamprologus_brichardi
ENSATEG00000020624	SMARCAL1	69	64.025	ENSMEUG00000004395	SMARCAL1	75	62.332	Notamacropus_eugenii
ENSATEG00000020624	SMARCAL1	99	79.341	ENSONIG00000009036	smarcal1	100	88.596	Oreochromis_niloticus
ENSATEG00000020624	SMARCAL1	100	73.536	ENSORLG00000016455	SMARCAL1	100	73.536	Oryzias_latipes
ENSATEG00000020624	SMARCAL1	100	73.644	ENSORLG00020001610	SMARCAL1	100	73.644	Oryzias_latipes_hni
ENSATEG00000020624	SMARCAL1	100	73.861	ENSORLG00015001865	SMARCAL1	100	73.861	Oryzias_latipes_hsok
ENSATEG00000020624	SMARCAL1	100	73.478	ENSOMEG00000001845	smarcal1	100	73.478	Oryzias_melastigma
ENSATEG00000020624	SMARCAL1	100	72.894	ENSPMGG00000019092	SMARCAL1	100	73.002	Periophthalmus_magnuspinnatus
ENSATEG00000020624	SMARCAL1	99	50.667	ENSPCIG00000022514	SMARCAL1	99	51.495	Phascolarctos_cinereus
ENSATEG00000020624	SMARCAL1	100	74.106	ENSPFOG00000000560	SMARCAL1	100	74.323	Poecilia_formosa
ENSATEG00000020624	SMARCAL1	100	74.106	ENSPMEG00000018146	SMARCAL1	100	74.323	Poecilia_mexicana
ENSATEG00000020624	SMARCAL1	60	86.574	ENSPREG00000009591	SMARCAL1	97	86.574	Poecilia_reticulata
ENSATEG00000020624	SMARCAL1	100	66.849	ENSPNAG00000014900	smarcal1	95	66.849	Pygocentrus_nattereri
ENSATEG00000020624	SMARCAL1	99	48.954	ENSSHAG00000013538	SMARCAL1	99	49.630	Sarcophilus_harrisii
ENSATEG00000020624	SMARCAL1	100	79.654	ENSSMAG00000010427	SMARCAL1	100	79.654	Scophthalmus_maximus
ENSATEG00000020624	SMARCAL1	98	84.004	ENSSDUG00000017470	SMARCAL1	95	84.116	Seriola_dumerili
ENSATEG00000020624	SMARCAL1	100	83.224	ENSSLDG00000007224	SMARCAL1	100	83.333	Seriola_lalandi_dorsalis
ENSATEG00000020624	SMARCAL1	78	64.771	ENSSPUG00000015369	SMARCAL1	72	64.771	Sphenodon_punctatus
ENSATEG00000020624	SMARCAL1	84	87.767	ENSSPAG00000003742	smarcal1	97	88.445	Stegastes_partitus
ENSATEG00000020624	SMARCAL1	76	58.177	ENSSSCG00000035501	SMARCAL1	76	58.237	Sus_scrofa
ENSATEG00000020624	SMARCAL1	75	62.702	ENSTGUG00000005079	SMARCAL1	99	62.702	Taeniopygia_guttata
ENSATEG00000020624	SMARCAL1	98	65.897	ENSTRUG00000010701	SMARCAL1	98	65.677	Takifugu_rubripes
ENSATEG00000020624	SMARCAL1	99	44.364	ENSTTRG00000009001	SMARCAL1	99	44.261	Tursiops_truncatus
ENSATEG00000020624	SMARCAL1	99	56.243	ENSXETG00000000465	smarcal1	99	56.348	Xenopus_tropicalis