EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000021201 (Gene tree)
Gene ID: 113151055
Gene Symbol: sf3a1
Alias: si:dz150f13.2|wu:fc38e01|wu:fc50a11|wu:fj37c05
Full Name: splicing factor 3a%2C subunit 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 5746 bases
Position: chrOOHO01000012.1:7288177-7293922
Accession: ZDB-GENE-030616-156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000030742	PRP21_like_P	PF12230.8	2e-51	1	1
ENSATEP00000030753	PRP21_like_P	PF12230.8	2.2e-51	1	1
ENSATEP00000030742	Surp	PF01805.20	8.5e-46	1	2
ENSATEP00000030742	Surp	PF01805.20	8.5e-46	2	2
ENSATEP00000030753	Surp	PF01805.20	1e-45	1	2
ENSATEP00000030753	Surp	PF01805.20	1e-45	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000031204	-	2385	-	ENSATEP00000030742	794 (aa)	-	-
ENSATET00000031215	-	2992	-	ENSATEP00000030753	840 (aa)	-	-

Gene Model

Click here to download ENSATEG00000021201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000021201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000021201	sf3a1	97	85.142	ENSG00000099995	SF3A1	97	85.956	Homo_sapiens
ENSATEG00000021201	sf3a1	96	96.863	ENSAPOG00000020465	sf3a1	97	96.863	Acanthochromis_polyacanthus
ENSATEG00000021201	sf3a1	97	86.068	ENSAMEG00000007737	SF3A1	96	85.938	Ailuropoda_melanoleuca
ENSATEG00000021201	sf3a1	96	96.340	ENSACIG00000020672	sf3a1	97	96.340	Amphilophus_citrinellus
ENSATEG00000021201	sf3a1	96	96.732	ENSAOCG00000003060	sf3a1	97	96.732	Amphiprion_ocellaris
ENSATEG00000021201	sf3a1	96	96.863	ENSAPEG00000010735	sf3a1	97	96.863	Amphiprion_percula
ENSATEG00000021201	sf3a1	95	84.585	ENSAPLG00000009057	SF3A1	99	85.026	Anas_platyrhynchos
ENSATEG00000021201	sf3a1	99	81.266	ENSACAG00000009415	SF3A1	97	83.014	Anolis_carolinensis
ENSATEG00000021201	sf3a1	97	86.216	ENSANAG00000032045	SF3A1	97	86.086	Aotus_nancymaae
ENSATEG00000021201	sf3a1	96	95.556	ENSACLG00000012622	sf3a1	97	94.771	Astatotilapia_calliptera
ENSATEG00000021201	sf3a1	97	89.351	ENSAMXG00000005382	sf3a1	98	89.610	Astyanax_mexicanus
ENSATEG00000021201	sf3a1	98	85.219	ENSBTAG00000003390	SF3A1	96	85.938	Bos_taurus
ENSATEG00000021201	sf3a1	79	45.753	WBGene00004188	prp-21	57	52.313	Caenorhabditis_elegans
ENSATEG00000021201	sf3a1	97	85.142	ENSCJAG00000010370	SF3A1	97	85.956	Callithrix_jacchus
ENSATEG00000021201	sf3a1	98	85.219	ENSCAFG00000012559	SF3A1	96	85.938	Canis_familiaris
ENSATEG00000021201	sf3a1	98	85.219	ENSCAFG00020000838	SF3A1	96	85.938	Canis_lupus_dingo
ENSATEG00000021201	sf3a1	98	85.347	ENSCHIG00000018642	SF3A1	96	86.068	Capra_hircus
ENSATEG00000021201	sf3a1	98	85.419	ENSTSYG00000004739	SF3A1	96	85.938	Carlito_syrichta
ENSATEG00000021201	sf3a1	94	69.385	ENSCAPG00000015414	SF3A1	97	69.251	Cavia_aperea
ENSATEG00000021201	sf3a1	98	85.219	ENSCPOG00000014589	SF3A1	96	85.938	Cavia_porcellus
ENSATEG00000021201	sf3a1	97	86.216	ENSCCAG00000032006	SF3A1	97	86.086	Cebus_capucinus
ENSATEG00000021201	sf3a1	98	85.219	ENSCATG00000029241	SF3A1	96	85.938	Cercocebus_atys
ENSATEG00000021201	sf3a1	97	85.938	ENSCLAG00000006508	SF3A1	96	85.807	Chinchilla_lanigera
ENSATEG00000021201	sf3a1	97	85.142	ENSCSAG00000009470	SF3A1	97	85.956	Chlorocebus_sabaeus
ENSATEG00000021201	sf3a1	58	90.476	ENSCHOG00000005201	SF3A1	62	90.000	Choloepus_hoffmanni
ENSATEG00000021201	sf3a1	99	82.129	ENSCPBG00000007595	SF3A1	97	83.943	Chrysemys_picta_bellii
ENSATEG00000021201	sf3a1	94	51.571	ENSCING00000008526	-	66	58.126	Ciona_intestinalis
ENSATEG00000021201	sf3a1	91	63.158	ENSCSAVG00000005608	-	85	45.388	Ciona_savignyi
ENSATEG00000021201	sf3a1	97	85.142	ENSCANG00000033564	SF3A1	97	85.956	Colobus_angolensis_palliatus
ENSATEG00000021201	sf3a1	96	85.921	ENSCGRG00001008933	Sf3a1	96	85.286	Cricetulus_griseus_chok1gshd
ENSATEG00000021201	sf3a1	96	85.921	ENSCGRG00000006127	Sf3a1	96	85.286	Cricetulus_griseus_crigri
ENSATEG00000021201	sf3a1	97	92.078	ENSCSEG00000010792	sf3a1	98	91.558	Cynoglossus_semilaevis
ENSATEG00000021201	sf3a1	98	92.258	ENSCVAG00000004560	sf3a1	97	93.203	Cyprinodon_variegatus
ENSATEG00000021201	sf3a1	96	87.500	ENSDARG00000041887	sf3a1	100	88.636	Danio_rerio
ENSATEG00000021201	sf3a1	98	85.696	ENSDNOG00000010629	SF3A1	96	85.956	Dasypus_novemcinctus
ENSATEG00000021201	sf3a1	98	85.219	ENSDORG00000005613	Sf3a1	96	85.938	Dipodomys_ordii
ENSATEG00000021201	sf3a1	82	61.394	FBgn0266917	Sf3a1	82	60.444	Drosophila_melanogaster
ENSATEG00000021201	sf3a1	84	84.604	ENSETEG00000017194	SF3A1	95	85.052	Echinops_telfairi
ENSATEG00000021201	sf3a1	99	67.070	ENSEBUG00000001285	sf3a1	96	68.025	Eptatretus_burgeri
ENSATEG00000021201	sf3a1	97	86.068	ENSEASG00005010254	SF3A1	96	85.938	Equus_asinus_asinus
ENSATEG00000021201	sf3a1	97	86.068	ENSECAG00000023962	SF3A1	96	85.938	Equus_caballus
ENSATEG00000021201	sf3a1	73	91.803	ENSEEUG00000003159	SF3A1	82	91.803	Erinaceus_europaeus
ENSATEG00000021201	sf3a1	96	87.370	ENSELUG00000022578	sf3a1	99	86.166	Esox_lucius
ENSATEG00000021201	sf3a1	98	85.090	ENSFCAG00000011932	SF3A1	96	85.807	Felis_catus
ENSATEG00000021201	sf3a1	95	83.905	ENSFALG00000006944	SF3A1	96	84.485	Ficedula_albicollis
ENSATEG00000021201	sf3a1	98	85.290	ENSFDAG00000009560	SF3A1	96	85.807	Fukomys_damarensis
ENSATEG00000021201	sf3a1	96	94.118	ENSFHEG00000010866	sf3a1	97	94.118	Fundulus_heteroclitus
ENSATEG00000021201	sf3a1	96	88.235	ENSGMOG00000016024	sf3a1	97	87.712	Gadus_morhua
ENSATEG00000021201	sf3a1	95	84.433	ENSGALG00000007937	SF3A1	96	84.876	Gallus_gallus
ENSATEG00000021201	sf3a1	96	93.987	ENSGAFG00000009111	sf3a1	97	93.987	Gambusia_affinis
ENSATEG00000021201	sf3a1	96	91.242	ENSGACG00000011893	sf3a1	97	90.104	Gasterosteus_aculeatus
ENSATEG00000021201	sf3a1	95	81.902	ENSGAGG00000000762	SF3A1	100	81.782	Gopherus_agassizii
ENSATEG00000021201	sf3a1	97	85.142	ENSGGOG00000012631	SF3A1	97	85.956	Gorilla_gorilla
ENSATEG00000021201	sf3a1	96	96.078	ENSHBUG00000015795	sf3a1	97	96.078	Haplochromis_burtoni
ENSATEG00000021201	sf3a1	98	85.090	ENSHGLG00000007907	SF3A1	96	85.807	Heterocephalus_glaber_female
ENSATEG00000021201	sf3a1	98	85.090	ENSHGLG00100013799	SF3A1	96	85.807	Heterocephalus_glaber_male
ENSATEG00000021201	sf3a1	98	88.803	ENSHCOG00000015423	sf3a1	98	89.221	Hippocampus_comes
ENSATEG00000021201	sf3a1	97	85.584	ENSIPUG00000002470	sf3a1	98	86.104	Ictalurus_punctatus
ENSATEG00000021201	sf3a1	97	85.938	ENSSTOG00000013892	SF3A1	96	85.807	Ictidomys_tridecemlineatus
ENSATEG00000021201	sf3a1	98	85.309	ENSJJAG00000022566	Sf3a1	96	85.807	Jaculus_jaculus
ENSATEG00000021201	sf3a1	97	92.448	ENSKMAG00000002400	sf3a1	98	92.448	Kryptolebias_marmoratus
ENSATEG00000021201	sf3a1	97	92.448	ENSLBEG00000022974	sf3a1	97	92.288	Labrus_bergylta
ENSATEG00000021201	sf3a1	96	85.156	ENSLACG00000003565	SF3A1	97	84.615	Latimeria_chalumnae
ENSATEG00000021201	sf3a1	98	87.340	ENSLOCG00000008251	sf3a1	97	88.166	Lepisosteus_oculatus
ENSATEG00000021201	sf3a1	97	56.163	ENSLAFG00000026032	-	97	55.969	Loxodonta_africana
ENSATEG00000021201	sf3a1	98	85.733	ENSLAFG00000000448	SF3A1	96	86.068	Loxodonta_africana
ENSATEG00000021201	sf3a1	97	85.013	ENSMFAG00000031979	SF3A1	97	85.826	Macaca_fascicularis
ENSATEG00000021201	sf3a1	97	85.013	ENSMMUG00000005547	SF3A1	97	85.826	Macaca_mulatta
ENSATEG00000021201	sf3a1	97	84.884	ENSMNEG00000037229	SF3A1	97	85.696	Macaca_nemestrina
ENSATEG00000021201	sf3a1	97	85.142	ENSMLEG00000041908	SF3A1	97	85.956	Mandrillus_leucophaeus
ENSATEG00000021201	sf3a1	97	95.833	ENSMAMG00000006460	sf3a1	96	95.833	Mastacembelus_armatus
ENSATEG00000021201	sf3a1	96	95.556	ENSMZEG00005009633	sf3a1	97	94.771	Maylandia_zebra
ENSATEG00000021201	sf3a1	95	84.433	ENSMGAG00000001330	SF3A1	99	85.007	Meleagris_gallopavo
ENSATEG00000021201	sf3a1	92	81.880	ENSMAUG00000020317	Sf3a1	94	81.744	Mesocricetus_auratus
ENSATEG00000021201	sf3a1	98	85.347	ENSMICG00000010038	SF3A1	96	85.026	Microcebus_murinus
ENSATEG00000021201	sf3a1	98	84.704	ENSMOCG00000008438	Sf3a1	97	85.306	Microtus_ochrogaster
ENSATEG00000021201	sf3a1	97	90.495	ENSMMOG00000015588	sf3a1	97	91.276	Mola_mola
ENSATEG00000021201	sf3a1	97	83.979	ENSMODG00000009270	SF3A1	97	85.696	Monodelphis_domestica
ENSATEG00000021201	sf3a1	97	94.668	ENSMALG00000000148	sf3a1	99	95.504	Monopterus_albus
ENSATEG00000021201	sf3a1	97	85.566	MGP_CAROLIEiJ_G0016029	Sf3a1	97	85.436	Mus_caroli
ENSATEG00000021201	sf3a1	97	85.566	ENSMUSG00000002129	Sf3a1	97	85.436	Mus_musculus
ENSATEG00000021201	sf3a1	97	85.566	MGP_PahariEiJ_G0016862	Sf3a1	97	84.088	Mus_pahari
ENSATEG00000021201	sf3a1	97	85.566	MGP_SPRETEiJ_G0016870	Sf3a1	97	85.436	Mus_spretus
ENSATEG00000021201	sf3a1	98	84.576	ENSMPUG00000013144	SF3A1	96	86.068	Mustela_putorius_furo
ENSATEG00000021201	sf3a1	98	85.219	ENSMLUG00000002139	SF3A1	96	85.938	Myotis_lucifugus
ENSATEG00000021201	sf3a1	97	85.807	ENSNGAG00000016977	Sf3a1	96	85.677	Nannospalax_galili
ENSATEG00000021201	sf3a1	96	96.209	ENSNBRG00000016642	sf3a1	97	96.209	Neolamprologus_brichardi
ENSATEG00000021201	sf3a1	97	85.142	ENSNLEG00000003686	SF3A1	97	85.956	Nomascus_leucogenys
ENSATEG00000021201	sf3a1	97	86.328	ENSOPRG00000016636	SF3A1	96	86.198	Ochotona_princeps
ENSATEG00000021201	sf3a1	97	85.530	ENSODEG00000002571	SF3A1	97	85.938	Octodon_degus
ENSATEG00000021201	sf3a1	96	95.948	ENSONIG00000010848	sf3a1	97	95.556	Oreochromis_niloticus
ENSATEG00000021201	sf3a1	98	85.548	ENSOCUG00000007633	SF3A1	96	85.938	Oryctolagus_cuniculus
ENSATEG00000021201	sf3a1	92	92.896	ENSORLG00000013050	sf3a1	100	91.953	Oryzias_latipes
ENSATEG00000021201	sf3a1	96	90.000	ENSORLG00020003236	sf3a1	98	89.796	Oryzias_latipes_hni
ENSATEG00000021201	sf3a1	96	92.941	ENSORLG00015017411	sf3a1	97	92.680	Oryzias_latipes_hsok
ENSATEG00000021201	sf3a1	96	92.549	ENSOMEG00000013362	sf3a1	97	92.288	Oryzias_melastigma
ENSATEG00000021201	sf3a1	98	85.419	ENSOGAG00000012931	SF3A1	96	85.938	Otolemur_garnettii
ENSATEG00000021201	sf3a1	98	83.933	ENSOARG00000006849	SF3A1	96	84.505	Ovis_aries
ENSATEG00000021201	sf3a1	97	84.367	ENSPPAG00000041790	SF3A1	97	85.176	Pan_paniscus
ENSATEG00000021201	sf3a1	98	85.090	ENSPPRG00000004391	SF3A1	96	85.807	Panthera_pardus
ENSATEG00000021201	sf3a1	98	85.161	ENSPTIG00000000844	SF3A1	99	85.677	Panthera_tigris_altaica
ENSATEG00000021201	sf3a1	97	85.142	ENSPTRG00000014240	SF3A1	97	85.956	Pan_troglodytes
ENSATEG00000021201	sf3a1	97	85.142	ENSPANG00000020772	SF3A1	97	85.956	Papio_anubis
ENSATEG00000021201	sf3a1	83	91.209	ENSPSIG00000012803	SF3A1	99	91.209	Pelodiscus_sinensis
ENSATEG00000021201	sf3a1	96	89.935	ENSPMGG00000023096	sf3a1	100	89.935	Periophthalmus_magnuspinnatus
ENSATEG00000021201	sf3a1	96	86.053	ENSPEMG00000009494	Sf3a1	96	85.417	Peromyscus_maniculatus_bairdii
ENSATEG00000021201	sf3a1	64	81.128	ENSPMAG00000007139	-	99	73.469	Petromyzon_marinus
ENSATEG00000021201	sf3a1	97	84.685	ENSPCIG00000022692	SF3A1	97	85.956	Phascolarctos_cinereus
ENSATEG00000021201	sf3a1	93	87.211	ENSPFOG00000016768	sf3a1	93	87.211	Poecilia_formosa
ENSATEG00000021201	sf3a1	96	94.771	ENSPLAG00000017268	sf3a1	97	94.771	Poecilia_latipinna
ENSATEG00000021201	sf3a1	89	91.298	ENSPMEG00000019811	sf3a1	98	93.383	Poecilia_mexicana
ENSATEG00000021201	sf3a1	96	94.510	ENSPREG00000010347	sf3a1	97	94.510	Poecilia_reticulata
ENSATEG00000021201	sf3a1	97	85.142	ENSPPYG00000011707	SF3A1	97	85.956	Pongo_abelii
ENSATEG00000021201	sf3a1	57	85.377	ENSPCAG00000003266	SF3A1	56	85.437	Procavia_capensis
ENSATEG00000021201	sf3a1	98	85.090	ENSPCOG00000026630	SF3A1	96	84.766	Propithecus_coquereli
ENSATEG00000021201	sf3a1	94	85.542	ENSPVAG00000017719	SF3A1	94	85.408	Pteropus_vampyrus
ENSATEG00000021201	sf3a1	96	95.686	ENSPNYG00000018706	sf3a1	97	94.771	Pundamilia_nyererei
ENSATEG00000021201	sf3a1	98	88.790	ENSPNAG00000003721	sf3a1	98	89.740	Pygocentrus_nattereri
ENSATEG00000021201	sf3a1	97	84.625	ENSRNOG00000005218	Sf3a1	96	85.417	Rattus_norvegicus
ENSATEG00000021201	sf3a1	97	85.142	ENSRBIG00000032167	SF3A1	97	85.956	Rhinopithecus_bieti
ENSATEG00000021201	sf3a1	97	85.142	ENSRROG00000044908	SF3A1	97	85.956	Rhinopithecus_roxellana
ENSATEG00000021201	sf3a1	93	86.259	ENSSBOG00000021960	SF3A1	98	86.078	Saimiri_boliviensis_boliviensis
ENSATEG00000021201	sf3a1	97	81.641	ENSSHAG00000003666	SF3A1	97	83.225	Sarcophilus_harrisii
ENSATEG00000021201	sf3a1	96	90.755	ENSSFOG00015004579	sf3a1	97	91.667	Scleropages_formosus
ENSATEG00000021201	sf3a1	96	90.850	ENSSMAG00000004275	sf3a1	98	90.495	Scophthalmus_maximus
ENSATEG00000021201	sf3a1	96	96.471	ENSSDUG00000022219	sf3a1	97	96.471	Seriola_dumerili
ENSATEG00000021201	sf3a1	96	96.471	ENSSLDG00000012642	sf3a1	97	96.471	Seriola_lalandi_dorsalis
ENSATEG00000021201	sf3a1	98	82.452	ENSSARG00000005960	SF3A1	99	82.943	Sorex_araneus
ENSATEG00000021201	sf3a1	96	83.636	ENSSPUG00000018863	SF3A1	97	84.615	Sphenodon_punctatus
ENSATEG00000021201	sf3a1	96	96.078	ENSSPAG00000011856	sf3a1	97	95.686	Stegastes_partitus
ENSATEG00000021201	sf3a1	98	84.576	ENSSSCG00000010002	SF3A1	96	85.938	Sus_scrofa
ENSATEG00000021201	sf3a1	95	84.474	ENSTGUG00000010547	SF3A1	99	84.896	Taeniopygia_guttata
ENSATEG00000021201	sf3a1	96	89.542	ENSTRUG00000006118	sf3a1	97	89.542	Takifugu_rubripes
ENSATEG00000021201	sf3a1	63	87.732	ENSTNIG00000005713	sf3a1	88	88.496	Tetraodon_nigroviridis
ENSATEG00000021201	sf3a1	98	78.792	ENSTBEG00000012771	SF3A1	97	79.324	Tupaia_belangeri
ENSATEG00000021201	sf3a1	98	84.724	ENSTTRG00000001535	SF3A1	96	85.566	Tursiops_truncatus
ENSATEG00000021201	sf3a1	98	83.697	ENSUAMG00000006750	SF3A1	95	84.908	Ursus_americanus
ENSATEG00000021201	sf3a1	98	85.419	ENSUMAG00000016665	SF3A1	98	85.156	Ursus_maritimus
ENSATEG00000021201	sf3a1	98	85.219	ENSVVUG00000003075	SF3A1	96	85.938	Vulpes_vulpes
ENSATEG00000021201	sf3a1	96	81.997	ENSXETG00000016144	sf3a1	96	84.677	Xenopus_tropicalis
ENSATEG00000021201	sf3a1	96	93.987	ENSXCOG00000015653	sf3a1	97	93.987	Xiphophorus_couchianus
ENSATEG00000021201	sf3a1	96	94.248	ENSXMAG00000002753	sf3a1	98	93.289	Xiphophorus_maculatus