EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000021263 (Gene tree)
Gene ID: 113164791
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 17136 bases
Position: chrOOHO01000004.1:32925002-32942137
Accession: 113164791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000030798	RRM_1	PF00076.22	1.9e-16	1	2
ENSATEP00000030798	RRM_1	PF00076.22	1.9e-16	2	2
ENSATEP00000030783	RRM_1	PF00076.22	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000031245	-	5454	-	ENSATEP00000030783	477 (aa)	-	-
ENSATET00000031260	-	2174	-	ENSATEP00000030798	515 (aa)	XP_026220058	UPI000E45F5C5

Gene Model

Click here to download ENSATEG00000021263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000021263's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000021263	rnpc3	97	54.762	ENSG00000185946	RNPC3	96	57.143	Homo_sapiens
ENSATEG00000021263	rnpc3	100	81.589	ENSAPOG00000017371	rnpc3	100	81.589	Acanthochromis_polyacanthus
ENSATEG00000021263	rnpc3	97	54.274	ENSAMEG00000001694	RNPC3	95	54.274	Ailuropoda_melanoleuca
ENSATEG00000021263	rnpc3	99	78.125	ENSACIG00000021043	rnpc3	99	78.125	Amphilophus_citrinellus
ENSATEG00000021263	rnpc3	100	82.752	ENSAOCG00000014052	rnpc3	98	82.752	Amphiprion_ocellaris
ENSATEG00000021263	rnpc3	100	82.558	ENSAPEG00000008739	rnpc3	98	82.558	Amphiprion_percula
ENSATEG00000021263	rnpc3	89	55.484	ENSAPLG00000015605	RNPC3	99	54.428	Anas_platyrhynchos
ENSATEG00000021263	rnpc3	98	53.725	ENSACAG00000002029	RNPC3	98	52.015	Anolis_carolinensis
ENSATEG00000021263	rnpc3	97	54.781	ENSANAG00000019950	RNPC3	95	54.781	Aotus_nancymaae
ENSATEG00000021263	rnpc3	99	80.312	ENSACLG00000014702	rnpc3	99	80.312	Astatotilapia_calliptera
ENSATEG00000021263	rnpc3	99	66.151	ENSAMXG00000033372	rnpc3	99	66.151	Astyanax_mexicanus
ENSATEG00000021263	rnpc3	97	54.800	ENSBTAG00000019091	RNPC3	95	54.800	Bos_taurus
ENSATEG00000021263	rnpc3	97	54.582	ENSCJAG00000035686	RNPC3	95	54.582	Callithrix_jacchus
ENSATEG00000021263	rnpc3	97	54.092	ENSCAFG00000019972	RNPC3	95	54.092	Canis_familiaris
ENSATEG00000021263	rnpc3	97	54.871	ENSCAFG00020011300	RNPC3	95	54.871	Canis_lupus_dingo
ENSATEG00000021263	rnpc3	97	54.743	ENSCHIG00000020361	RNPC3	95	54.691	Capra_hircus
ENSATEG00000021263	rnpc3	97	54.491	ENSTSYG00000030256	RNPC3	95	54.291	Carlito_syrichta
ENSATEG00000021263	rnpc3	86	46.325	ENSCAPG00000013600	RNPC3	97	46.501	Cavia_aperea
ENSATEG00000021263	rnpc3	97	54.582	ENSCPOG00000031638	RNPC3	95	54.582	Cavia_porcellus
ENSATEG00000021263	rnpc3	97	54.473	ENSCCAG00000024301	RNPC3	95	54.455	Cebus_capucinus
ENSATEG00000021263	rnpc3	97	54.653	ENSCATG00000002086	RNPC3	95	54.653	Cercocebus_atys
ENSATEG00000021263	rnpc3	97	42.000	ENSCATG00000035930	-	52	48.400	Cercocebus_atys
ENSATEG00000021263	rnpc3	97	53.400	ENSCLAG00000005169	RNPC3	95	53.200	Chinchilla_lanigera
ENSATEG00000021263	rnpc3	97	54.653	ENSCSAG00000001519	RNPC3	95	54.653	Chlorocebus_sabaeus
ENSATEG00000021263	rnpc3	97	56.832	ENSCPBG00000028311	RNPC3	95	56.238	Chrysemys_picta_bellii
ENSATEG00000021263	rnpc3	95	35.887	ENSCSAVG00000002800	-	87	45.550	Ciona_savignyi
ENSATEG00000021263	rnpc3	97	54.653	ENSCANG00000031444	RNPC3	95	54.653	Colobus_angolensis_palliatus
ENSATEG00000021263	rnpc3	97	53.984	ENSCGRG00001019276	Rnpc3	95	53.984	Cricetulus_griseus_chok1gshd
ENSATEG00000021263	rnpc3	89	52.155	ENSCGRG00000000053	Rnpc3	99	52.155	Cricetulus_griseus_crigri
ENSATEG00000021263	rnpc3	99	75.147	ENSCSEG00000013475	rnpc3	99	75.147	Cynoglossus_semilaevis
ENSATEG00000021263	rnpc3	100	79.497	ENSCVAG00000002645	rnpc3	100	79.497	Cyprinodon_variegatus
ENSATEG00000021263	rnpc3	99	65.825	ENSDARG00000011247	rnpc3	99	64.854	Danio_rerio
ENSATEG00000021263	rnpc3	97	53.785	ENSDNOG00000044555	-	95	53.571	Dasypus_novemcinctus
ENSATEG00000021263	rnpc3	97	54.183	ENSDNOG00000047498	-	95	53.968	Dasypus_novemcinctus
ENSATEG00000021263	rnpc3	98	54.150	ENSDORG00000027343	Rnpc3	96	54.150	Dipodomys_ordii
ENSATEG00000021263	rnpc3	96	50.195	ENSEBUG00000002068	rnpc3	96	50.000	Eptatretus_burgeri
ENSATEG00000021263	rnpc3	97	55.777	ENSEASG00005015957	RNPC3	95	55.777	Equus_asinus_asinus
ENSATEG00000021263	rnpc3	97	55.534	ENSECAG00000021148	RNPC3	95	55.467	Equus_caballus
ENSATEG00000021263	rnpc3	99	69.084	ENSELUG00000002264	rnpc3	99	66.667	Esox_lucius
ENSATEG00000021263	rnpc3	99	53.307	ENSFCAG00000024312	RNPC3	96	53.831	Felis_catus
ENSATEG00000021263	rnpc3	89	57.328	ENSFALG00000002580	RNPC3	99	56.681	Ficedula_albicollis
ENSATEG00000021263	rnpc3	97	54.871	ENSFDAG00000019948	RNPC3	95	54.871	Fukomys_damarensis
ENSATEG00000021263	rnpc3	100	72.674	ENSFHEG00000020647	rnpc3	100	72.481	Fundulus_heteroclitus
ENSATEG00000021263	rnpc3	100	67.437	ENSGMOG00000019213	rnpc3	99	67.181	Gadus_morhua
ENSATEG00000021263	rnpc3	97	56.859	ENSGALG00000005162	RNPC3	88	56.634	Gallus_gallus
ENSATEG00000021263	rnpc3	100	77.132	ENSGAFG00000017236	rnpc3	100	77.132	Gambusia_affinis
ENSATEG00000021263	rnpc3	100	78.530	ENSGACG00000002048	rnpc3	99	79.808	Gasterosteus_aculeatus
ENSATEG00000021263	rnpc3	97	57.905	ENSGAGG00000008438	RNPC3	94	56.917	Gopherus_agassizii
ENSATEG00000021263	rnpc3	97	48.310	ENSGGOG00000026201	-	95	48.310	Gorilla_gorilla
ENSATEG00000021263	rnpc3	82	81.250	ENSHBUG00000015966	rnpc3	85	81.250	Haplochromis_burtoni
ENSATEG00000021263	rnpc3	97	53.892	ENSHGLG00000001708	RNPC3	95	53.892	Heterocephalus_glaber_female
ENSATEG00000021263	rnpc3	97	53.892	ENSHGLG00100003005	RNPC3	95	53.892	Heterocephalus_glaber_male
ENSATEG00000021263	rnpc3	99	74.369	ENSHCOG00000017135	rnpc3	100	74.369	Hippocampus_comes
ENSATEG00000021263	rnpc3	99	63.689	ENSIPUG00000002916	rnpc3	99	64.466	Ictalurus_punctatus
ENSATEG00000021263	rnpc3	97	54.455	ENSSTOG00000025020	RNPC3	95	54.455	Ictidomys_tridecemlineatus
ENSATEG00000021263	rnpc3	97	54.509	ENSJJAG00000010203	Rnpc3	96	54.150	Jaculus_jaculus
ENSATEG00000021263	rnpc3	99	79.532	ENSKMAG00000017358	rnpc3	99	79.142	Kryptolebias_marmoratus
ENSATEG00000021263	rnpc3	100	79.845	ENSLBEG00000024901	rnpc3	98	79.845	Labrus_bergylta
ENSATEG00000021263	rnpc3	99	58.333	ENSLACG00000005720	RNPC3	92	55.728	Latimeria_chalumnae
ENSATEG00000021263	rnpc3	99	62.378	ENSLOCG00000007986	rnpc3	99	59.844	Lepisosteus_oculatus
ENSATEG00000021263	rnpc3	97	55.159	ENSLAFG00000032342	RNPC3	95	55.159	Loxodonta_africana
ENSATEG00000021263	rnpc3	97	40.882	ENSMFAG00000002917	-	95	41.082	Macaca_fascicularis
ENSATEG00000021263	rnpc3	97	54.455	ENSMFAG00000002004	RNPC3	95	54.455	Macaca_fascicularis
ENSATEG00000021263	rnpc3	97	54.257	ENSMMUG00000018039	RNPC3	95	54.257	Macaca_mulatta
ENSATEG00000021263	rnpc3	79	50.450	ENSMMUG00000002098	-	85	50.450	Macaca_mulatta
ENSATEG00000021263	rnpc3	97	51.287	ENSMNEG00000033950	RNPC3	95	51.287	Macaca_nemestrina
ENSATEG00000021263	rnpc3	97	39.679	ENSMNEG00000029209	-	95	40.681	Macaca_nemestrina
ENSATEG00000021263	rnpc3	97	54.653	ENSMLEG00000033628	RNPC3	95	54.653	Mandrillus_leucophaeus
ENSATEG00000021263	rnpc3	97	42.043	ENSMLEG00000034644	-	95	42.330	Mandrillus_leucophaeus
ENSATEG00000021263	rnpc3	100	73.450	ENSMAMG00000007496	rnpc3	100	73.450	Mastacembelus_armatus
ENSATEG00000021263	rnpc3	99	80.464	ENSMZEG00005020233	rnpc3	99	80.464	Maylandia_zebra
ENSATEG00000021263	rnpc3	89	56.250	ENSMGAG00000006381	RNPC3	99	55.269	Meleagris_gallopavo
ENSATEG00000021263	rnpc3	97	54.600	ENSMAUG00000001358	Rnpc3	95	54.600	Mesocricetus_auratus
ENSATEG00000021263	rnpc3	97	55.050	ENSMICG00000029591	RNPC3	95	55.050	Microcebus_murinus
ENSATEG00000021263	rnpc3	97	54.400	ENSMOCG00000013423	Rnpc3	95	54.400	Microtus_ochrogaster
ENSATEG00000021263	rnpc3	100	73.114	ENSMMOG00000005309	rnpc3	100	74.662	Mola_mola
ENSATEG00000021263	rnpc3	97	55.666	ENSMODG00000002946	RNPC3	95	55.666	Monodelphis_domestica
ENSATEG00000021263	rnpc3	99	80.350	ENSMALG00000015471	rnpc3	100	80.350	Monopterus_albus
ENSATEG00000021263	rnpc3	97	55.000	MGP_CAROLIEiJ_G0025555	Rnpc3	96	55.000	Mus_caroli
ENSATEG00000021263	rnpc3	97	54.600	ENSMUSG00000027981	Rnpc3	99	53.178	Mus_musculus
ENSATEG00000021263	rnpc3	98	54.257	MGP_PahariEiJ_G0027001	Rnpc3	97	54.257	Mus_pahari
ENSATEG00000021263	rnpc3	97	54.600	MGP_SPRETEiJ_G0026505	Rnpc3	96	54.600	Mus_spretus
ENSATEG00000021263	rnpc3	97	54.291	ENSMPUG00000007349	RNPC3	95	54.291	Mustela_putorius_furo
ENSATEG00000021263	rnpc3	97	54.890	ENSMLUG00000028743	RNPC3	95	54.890	Myotis_lucifugus
ENSATEG00000021263	rnpc3	97	55.268	ENSNGAG00000010939	Rnpc3	95	55.268	Nannospalax_galili
ENSATEG00000021263	rnpc3	99	80.507	ENSNBRG00000012196	rnpc3	96	80.507	Neolamprologus_brichardi
ENSATEG00000021263	rnpc3	97	54.890	ENSNLEG00000012013	RNPC3	95	54.890	Nomascus_leucogenys
ENSATEG00000021263	rnpc3	97	54.491	ENSODEG00000007612	RNPC3	95	54.491	Octodon_degus
ENSATEG00000021263	rnpc3	99	81.287	ENSONIG00000004770	rnpc3	100	81.200	Oreochromis_niloticus
ENSATEG00000021263	rnpc3	92	56.751	ENSOANG00000008220	RNPC3	99	56.000	Ornithorhynchus_anatinus
ENSATEG00000021263	rnpc3	97	55.336	ENSOCUG00000004016	RNPC3	95	55.289	Oryctolagus_cuniculus
ENSATEG00000021263	rnpc3	100	75.194	ENSORLG00000005694	rnpc3	100	75.194	Oryzias_latipes
ENSATEG00000021263	rnpc3	100	75.969	ENSORLG00020005513	rnpc3	100	75.969	Oryzias_latipes_hni
ENSATEG00000021263	rnpc3	100	75.775	ENSORLG00015002179	rnpc3	100	75.775	Oryzias_latipes_hsok
ENSATEG00000021263	rnpc3	100	75.775	ENSOMEG00000017737	rnpc3	100	75.775	Oryzias_melastigma
ENSATEG00000021263	rnpc3	97	55.534	ENSOGAG00000026182	RNPC3	95	55.534	Otolemur_garnettii
ENSATEG00000021263	rnpc3	97	54.743	ENSOARG00000018719	RNPC3	95	54.691	Ovis_aries
ENSATEG00000021263	rnpc3	97	49.605	ENSPPAG00000030278	-	97	49.209	Pan_paniscus
ENSATEG00000021263	rnpc3	97	54.762	ENSPPAG00000037459	RNPC3	95	54.762	Pan_paniscus
ENSATEG00000021263	rnpc3	99	53.411	ENSPPRG00000020246	RNPC3	96	53.937	Panthera_pardus
ENSATEG00000021263	rnpc3	98	53.937	ENSPTIG00000009887	RNPC3	98	53.937	Panthera_tigris_altaica
ENSATEG00000021263	rnpc3	97	48.310	ENSPTRG00000044227	-	97	48.310	Pan_troglodytes
ENSATEG00000021263	rnpc3	97	54.455	ENSPTRG00000033902	RNPC3	95	54.455	Pan_troglodytes
ENSATEG00000021263	rnpc3	97	54.762	ENSPANG00000012137	RNPC3	95	54.762	Papio_anubis
ENSATEG00000021263	rnpc3	97	44.158	ENSPANG00000029957	-	96	43.590	Papio_anubis
ENSATEG00000021263	rnpc3	99	64.922	ENSPKIG00000008828	rnpc3	99	63.372	Paramormyrops_kingsleyae
ENSATEG00000021263	rnpc3	65	53.254	ENSPSIG00000007396	RNPC3	99	52.663	Pelodiscus_sinensis
ENSATEG00000021263	rnpc3	99	65.049	ENSPMGG00000011742	rnpc3	100	64.660	Periophthalmus_magnuspinnatus
ENSATEG00000021263	rnpc3	92	51.782	ENSPEMG00000020112	Rnpc3	99	52.391	Peromyscus_maniculatus_bairdii
ENSATEG00000021263	rnpc3	97	55.378	ENSPCIG00000004415	-	95	55.467	Phascolarctos_cinereus
ENSATEG00000021263	rnpc3	99	77.282	ENSPFOG00000009895	rnpc3	99	77.583	Poecilia_formosa
ENSATEG00000021263	rnpc3	99	77.864	ENSPLAG00000012023	rnpc3	99	78.016	Poecilia_latipinna
ENSATEG00000021263	rnpc3	99	77.519	ENSPMEG00000003663	rnpc3	99	77.778	Poecilia_mexicana
ENSATEG00000021263	rnpc3	100	77.326	ENSPREG00000010206	rnpc3	100	77.326	Poecilia_reticulata
ENSATEG00000021263	rnpc3	88	50.708	ENSPPYG00000001102	RNPC3	94	50.708	Pongo_abelii
ENSATEG00000021263	rnpc3	99	80.312	ENSPNYG00000020603	rnpc3	99	80.312	Pundamilia_nyererei
ENSATEG00000021263	rnpc3	99	57.034	ENSPNAG00000000524	rnpc3	92	56.844	Pygocentrus_nattereri
ENSATEG00000021263	rnpc3	97	54.400	ENSRNOG00000017310	Rnpc3	95	54.400	Rattus_norvegicus
ENSATEG00000021263	rnpc3	97	51.984	ENSRBIG00000043897	RNPC3	95	51.984	Rhinopithecus_bieti
ENSATEG00000021263	rnpc3	97	54.653	ENSRROG00000032334	RNPC3	95	54.653	Rhinopithecus_roxellana
ENSATEG00000021263	rnpc3	97	54.563	ENSSBOG00000024473	RNPC3	95	54.563	Saimiri_boliviensis_boliviensis
ENSATEG00000021263	rnpc3	97	55.159	ENSSHAG00000011859	RNPC3	95	55.159	Sarcophilus_harrisii
ENSATEG00000021263	rnpc3	99	67.118	ENSSFOG00015013055	rnpc3	99	67.118	Scleropages_formosus
ENSATEG00000021263	rnpc3	100	82.785	ENSSMAG00000020346	rnpc3	100	82.785	Scophthalmus_maximus
ENSATEG00000021263	rnpc3	100	85.465	ENSSDUG00000006600	rnpc3	100	85.465	Seriola_dumerili
ENSATEG00000021263	rnpc3	100	85.078	ENSSLDG00000007979	rnpc3	100	85.078	Seriola_lalandi_dorsalis
ENSATEG00000021263	rnpc3	97	55.078	ENSSPUG00000008539	-	95	54.883	Sphenodon_punctatus
ENSATEG00000021263	rnpc3	97	51.098	ENSSPUG00000003872	-	92	51.098	Sphenodon_punctatus
ENSATEG00000021263	rnpc3	100	80.426	ENSSPAG00000005633	rnpc3	100	80.233	Stegastes_partitus
ENSATEG00000021263	rnpc3	97	55.159	ENSSSCG00000037254	RNPC3	95	53.968	Sus_scrofa
ENSATEG00000021263	rnpc3	89	57.235	ENSTGUG00000004795	-	99	54.644	Taeniopygia_guttata
ENSATEG00000021263	rnpc3	99	75.629	ENSTNIG00000018963	rnpc3	100	75.629	Tetraodon_nigroviridis
ENSATEG00000021263	rnpc3	97	54.183	ENSUMAG00000007775	RNPC3	97	54.183	Ursus_maritimus
ENSATEG00000021263	rnpc3	97	54.871	ENSVVUG00000000331	RNPC3	95	54.871	Vulpes_vulpes
ENSATEG00000021263	rnpc3	97	44.902	ENSXETG00000025027	rnpc3	96	44.204	Xenopus_tropicalis
ENSATEG00000021263	rnpc3	94	74.179	ENSXCOG00000005013	rnpc3	100	76.437	Xiphophorus_couchianus
ENSATEG00000021263	rnpc3	100	77.713	ENSXMAG00000006495	rnpc3	100	77.713	Xiphophorus_maculatus