EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000021567 (Gene tree)
Gene ID: 113170507
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 6842 bases
Position: chrOOHO01000006.1:9791109-9797950
Accession: 113170507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000031280	RRM_1	PF00076.22	2.6e-33	1	2
ENSATEP00000031280	RRM_1	PF00076.22	2.6e-33	2	2
ENSATEP00000031287	RRM_1	PF00076.22	2.6e-33	1	2
ENSATEP00000031287	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000031745	-	1927	-	ENSATEP00000031280	238 (aa)	-	-
ENSATET00000031752	-	4215	-	ENSATEP00000031287	239 (aa)	XP_026228403	UPI000E454B93

Gene Model

Click here to download ENSATEG00000021567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000021567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000021567	-	67	43.787	ENSATEG00000007255	-	65	40.230
ENSATEG00000021567	-	94	62.445	ENSATEG00000019984	srsf9	81	67.157
ENSATEG00000021567	-	75	39.583	ENSATEG00000005680	srsf4	56	40.571
ENSATEG00000021567	-	68	40.556	ENSATEG00000000198	srsf5a	61	40.556
ENSATEG00000021567	-	80	89.062	ENSATEG00000022403	-	80	86.869
ENSATEG00000021567	-	66	45.198	ENSATEG00000019112	srsf5b	58	45.087

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000021567	-	100	84.959	ENSG00000136450	SRSF1	100	87.692	Homo_sapiens
ENSATEG00000021567	-	81	93.814	ENSAPOG00000008542	-	94	91.150	Acanthochromis_polyacanthus
ENSATEG00000021567	-	80	88.542	ENSAPOG00000002748	-	81	84.343	Acanthochromis_polyacanthus
ENSATEG00000021567	-	82	88.660	ENSAMEG00000002635	SRSF1	81	88.000	Ailuropoda_melanoleuca
ENSATEG00000021567	-	92	84.163	ENSACIG00000008091	srsf1a	86	87.817	Amphilophus_citrinellus
ENSATEG00000021567	-	92	83.784	ENSAOCG00000010671	-	86	86.869	Amphiprion_ocellaris
ENSATEG00000021567	-	82	91.133	ENSAOCG00000000337	-	95	90.638	Amphiprion_ocellaris
ENSATEG00000021567	-	92	83.784	ENSAPEG00000009915	-	86	86.869	Amphiprion_percula
ENSATEG00000021567	-	82	91.133	ENSAPEG00000023352	-	93	91.064	Amphiprion_percula
ENSATEG00000021567	-	81	86.802	ENSACAG00000005542	-	82	85.222	Anolis_carolinensis
ENSATEG00000021567	-	82	65.990	ENSANAG00000025417	-	78	65.000	Aotus_nancymaae
ENSATEG00000021567	-	100	84.959	ENSANAG00000020583	-	99	87.500	Aotus_nancymaae
ENSATEG00000021567	-	54	74.839	ENSAMXG00000024373	-	75	73.913	Astyanax_mexicanus
ENSATEG00000021567	-	96	81.818	ENSAMXG00000035996	srsf1a	80	88.119	Astyanax_mexicanus
ENSATEG00000021567	-	100	84.959	ENSBTAG00000014766	SRSF1	82	87.192	Bos_taurus
ENSATEG00000021567	-	100	84.959	ENSCJAG00000041713	-	99	87.500	Callithrix_jacchus
ENSATEG00000021567	-	81	82.143	ENSCJAG00000008111	-	90	80.693	Callithrix_jacchus
ENSATEG00000021567	-	100	84.959	ENSCAFG00000017430	SRSF1	80	87.192	Canis_familiaris
ENSATEG00000021567	-	100	84.959	ENSCAFG00020025632	-	80	87.192	Canis_lupus_dingo
ENSATEG00000021567	-	81	88.325	ENSCHIG00000010787	SRSF1	82	87.192	Capra_hircus
ENSATEG00000021567	-	100	84.959	ENSTSYG00000013899	-	99	87.500	Carlito_syrichta
ENSATEG00000021567	-	100	84.959	ENSCPOG00000032681	-	82	87.192	Cavia_porcellus
ENSATEG00000021567	-	100	84.959	ENSCCAG00000029484	-	99	87.500	Cebus_capucinus
ENSATEG00000021567	-	100	84.959	ENSCATG00000042294	-	99	87.500	Cercocebus_atys
ENSATEG00000021567	-	100	84.959	ENSCLAG00000014707	-	82	87.192	Chinchilla_lanigera
ENSATEG00000021567	-	100	84.146	ENSCSAG00000005642	-	80	86.207	Chlorocebus_sabaeus
ENSATEG00000021567	-	81	88.325	ENSCHOG00000001899	SRSF1	82	87.192	Choloepus_hoffmanni
ENSATEG00000021567	-	100	84.146	ENSCPBG00000009851	-	82	85.714	Chrysemys_picta_bellii
ENSATEG00000021567	-	100	84.959	ENSCANG00000029726	-	99	87.500	Colobus_angolensis_palliatus
ENSATEG00000021567	-	100	84.959	ENSCGRG00001000670	Srsf1	80	87.192	Cricetulus_griseus_chok1gshd
ENSATEG00000021567	-	100	84.959	ENSCGRG00000005590	Srsf1	82	87.192	Cricetulus_griseus_crigri
ENSATEG00000021567	-	80	87.435	ENSCSEG00000014272	-	84	83.756	Cynoglossus_semilaevis
ENSATEG00000021567	-	81	83.962	ENSCSEG00000009973	-	84	80.365	Cynoglossus_semilaevis
ENSATEG00000021567	-	81	90.909	ENSCVAG00000005458	-	93	90.476	Cyprinodon_variegatus
ENSATEG00000021567	-	80	89.062	ENSCVAG00000018617	-	81	86.869	Cyprinodon_variegatus
ENSATEG00000021567	-	81	83.575	ENSDARG00000057691	srsf1a	100	84.021	Danio_rerio
ENSATEG00000021567	-	81	88.325	ENSDARG00000017843	srsf1b	82	88.177	Danio_rerio
ENSATEG00000021567	-	100	84.959	ENSDNOG00000011737	-	80	87.192	Dasypus_novemcinctus
ENSATEG00000021567	-	100	84.959	ENSDORG00000015082	Srsf1	82	87.192	Dipodomys_ordii
ENSATEG00000021567	-	76	88.043	ENSETEG00000005349	-	63	87.500	Echinops_telfairi
ENSATEG00000021567	-	100	84.959	ENSEASG00005002922	-	80	87.192	Equus_asinus_asinus
ENSATEG00000021567	-	81	88.325	ENSECAG00000016654	SRSF1	82	87.192	Equus_caballus
ENSATEG00000021567	-	76	89.130	ENSEEUG00000009255	-	63	88.587	Erinaceus_europaeus
ENSATEG00000021567	-	81	87.755	ENSELUG00000021646	srsf1a	78	88.265	Esox_lucius
ENSATEG00000021567	-	100	84.959	ENSFCAG00000002250	-	92	88.587	Felis_catus
ENSATEG00000021567	-	78	87.719	ENSFALG00000005062	-	80	68.473	Ficedula_albicollis
ENSATEG00000021567	-	100	84.959	ENSFDAG00000010646	-	82	87.192	Fukomys_damarensis
ENSATEG00000021567	-	92	83.784	ENSFHEG00000003174	srsf1a	86	86.869	Fundulus_heteroclitus
ENSATEG00000021567	-	92	86.425	ENSGMOG00000014787	-	83	84.184	Gadus_morhua
ENSATEG00000021567	-	81	87.310	ENSGALG00000005525	SRSF1	82	85.714	Gallus_gallus
ENSATEG00000021567	-	81	89.175	ENSGACG00000020621	srsf1b	82	85.500	Gasterosteus_aculeatus
ENSATEG00000021567	-	100	84.146	ENSGAGG00000022965	-	78	87.817	Gopherus_agassizii
ENSATEG00000021567	-	100	84.959	ENSGGOG00000004386	SRSF1	99	87.500	Gorilla_gorilla
ENSATEG00000021567	-	92	84.163	ENSHBUG00000016788	srsf1a	83	87.817	Haplochromis_burtoni
ENSATEG00000021567	-	67	89.024	ENSHGLG00000000669	-	79	87.647	Heterocephalus_glaber_female
ENSATEG00000021567	-	67	89.024	ENSHGLG00000000600	-	79	87.647	Heterocephalus_glaber_female
ENSATEG00000021567	-	100	84.959	ENSHGLG00100016906	-	82	87.192	Heterocephalus_glaber_male
ENSATEG00000021567	-	80	81.818	ENSHCOG00000018918	srsf1a	80	81.863	Hippocampus_comes
ENSATEG00000021567	-	81	88.776	ENSIPUG00000008750	srsf1b	80	89.286	Ictalurus_punctatus
ENSATEG00000021567	-	80	85.500	ENSIPUG00000017039	srsf1a	82	85.437	Ictalurus_punctatus
ENSATEG00000021567	-	100	84.959	ENSSTOG00000000243	-	92	88.587	Ictidomys_tridecemlineatus
ENSATEG00000021567	-	52	80.952	ENSJJAG00000014464	-	95	80.159	Jaculus_jaculus
ENSATEG00000021567	-	100	84.959	ENSJJAG00000000102	-	82	87.192	Jaculus_jaculus
ENSATEG00000021567	-	80	88.083	ENSKMAG00000019232	srsf1a	81	87.437	Kryptolebias_marmoratus
ENSATEG00000021567	-	81	84.000	ENSLBEG00000015294	-	83	82.039	Labrus_bergylta
ENSATEG00000021567	-	92	83.333	ENSLBEG00000020864	-	86	85.859	Labrus_bergylta
ENSATEG00000021567	-	79	88.021	ENSLACG00000014160	srsf1a	74	85.859	Latimeria_chalumnae
ENSATEG00000021567	-	81	88.265	ENSLOCG00000005994	srsf1a	82	87.624	Lepisosteus_oculatus
ENSATEG00000021567	-	81	88.325	ENSLAFG00000025743	SRSF1	82	87.192	Loxodonta_africana
ENSATEG00000021567	-	100	84.959	ENSMFAG00000040003	-	99	87.500	Macaca_fascicularis
ENSATEG00000021567	-	100	84.959	ENSMMUG00000004725	SRSF1	99	87.500	Macaca_mulatta
ENSATEG00000021567	-	100	82.114	ENSMMUG00000003260	-	95	85.714	Macaca_mulatta
ENSATEG00000021567	-	100	84.959	ENSMNEG00000027680	-	99	87.500	Macaca_nemestrina
ENSATEG00000021567	-	100	81.707	ENSMNEG00000015983	-	80	84.236	Macaca_nemestrina
ENSATEG00000021567	-	81	88.325	ENSMLEG00000040509	SRSF1	82	87.192	Mandrillus_leucophaeus
ENSATEG00000021567	-	100	83.128	ENSMLEG00000015243	-	80	85.000	Mandrillus_leucophaeus
ENSATEG00000021567	-	81	92.268	ENSMAMG00000019687	-	82	89.500	Mastacembelus_armatus
ENSATEG00000021567	-	80	89.062	ENSMAMG00000018454	-	81	86.869	Mastacembelus_armatus
ENSATEG00000021567	-	81	92.347	ENSMAMG00000019691	-	95	89.912	Mastacembelus_armatus
ENSATEG00000021567	-	100	84.959	ENSMAUG00000021845	Srsf1	82	87.192	Mesocricetus_auratus
ENSATEG00000021567	-	100	84.959	ENSMICG00000013639	-	99	87.500	Microcebus_murinus
ENSATEG00000021567	-	100	84.959	ENSMOCG00000001996	Srsf1	82	87.192	Microtus_ochrogaster
ENSATEG00000021567	-	92	82.883	ENSMMOG00000014354	srsf1a	86	85.354	Mola_mola
ENSATEG00000021567	-	76	89.189	ENSMODG00000014781	-	63	89.730	Monodelphis_domestica
ENSATEG00000021567	-	80	88.542	ENSMALG00000017129	-	78	87.879	Monopterus_albus
ENSATEG00000021567	-	84	77.500	ENSMALG00000007763	-	82	77.000	Monopterus_albus
ENSATEG00000021567	-	100	84.959	MGP_CAROLIEiJ_G0016943	Srsf1	92	88.587	Mus_caroli
ENSATEG00000021567	-	100	84.959	ENSMUSG00000018379	Srsf1	92	88.587	Mus_musculus
ENSATEG00000021567	-	100	84.959	MGP_PahariEiJ_G0018074	Srsf1	82	87.192	Mus_pahari
ENSATEG00000021567	-	100	84.959	MGP_SPRETEiJ_G0017790	Srsf1	92	88.587	Mus_spretus
ENSATEG00000021567	-	81	88.325	ENSMPUG00000015369	SRSF1	82	87.192	Mustela_putorius_furo
ENSATEG00000021567	-	81	88.325	ENSMLUG00000011040	SRSF1	82	87.192	Myotis_lucifugus
ENSATEG00000021567	-	84	87.500	ENSMLUG00000023995	-	79	86.598	Myotis_lucifugus
ENSATEG00000021567	-	81	88.325	ENSNGAG00000011395	Srsf1	82	87.192	Nannospalax_galili
ENSATEG00000021567	-	100	80.913	ENSNBRG00000008041	srsf1b	82	80.000	Neolamprologus_brichardi
ENSATEG00000021567	-	100	84.959	ENSNLEG00000008088	-	99	87.500	Nomascus_leucogenys
ENSATEG00000021567	-	52	85.039	ENSMEUG00000002783	-	100	84.252	Notamacropus_eugenii
ENSATEG00000021567	-	54	88.636	ENSOPRG00000001234	-	75	86.957	Ochotona_princeps
ENSATEG00000021567	-	99	84.898	ENSODEG00000011481	-	82	86.700	Octodon_degus
ENSATEG00000021567	-	96	90.086	ENSONIG00000004860	-	83	87.624	Oreochromis_niloticus
ENSATEG00000021567	-	80	89.529	ENSONIG00000013160	-	80	87.817	Oreochromis_niloticus
ENSATEG00000021567	-	97	69.038	ENSOCUG00000010894	-	80	70.000	Oryctolagus_cuniculus
ENSATEG00000021567	-	80	89.062	ENSORLG00000004580	srsf1a	81	86.869	Oryzias_latipes
ENSATEG00000021567	-	92	83.784	ENSORLG00020009456	srsf1a	86	86.869	Oryzias_latipes_hni
ENSATEG00000021567	-	92	83.784	ENSORLG00015014384	srsf1a	86	86.869	Oryzias_latipes_hsok
ENSATEG00000021567	-	72	87.931	ENSOMEG00000004106	srsf1a	74	85.556	Oryzias_melastigma
ENSATEG00000021567	-	86	88.942	ENSOGAG00000025950	-	82	87.192	Otolemur_garnettii
ENSATEG00000021567	-	81	87.113	ENSOARG00000008323	SRSF1	81	86.500	Ovis_aries
ENSATEG00000021567	-	100	84.959	ENSPPAG00000043403	-	99	87.500	Pan_paniscus
ENSATEG00000021567	-	100	84.959	ENSPPRG00000004238	-	92	88.587	Panthera_pardus
ENSATEG00000021567	-	100	84.959	ENSPTRG00000049077	SRSF1	99	87.500	Pan_troglodytes
ENSATEG00000021567	-	100	84.959	ENSPANG00000022305	-	99	87.500	Papio_anubis
ENSATEG00000021567	-	100	68.465	ENSPANG00000030275	-	51	91.860	Papio_anubis
ENSATEG00000021567	-	96	82.251	ENSPKIG00000007204	srsf1a	86	86.364	Paramormyrops_kingsleyae
ENSATEG00000021567	-	81	88.776	ENSPKIG00000012857	srsf1b	82	88.119	Paramormyrops_kingsleyae
ENSATEG00000021567	-	81	80.402	ENSPSIG00000009000	-	82	79.024	Pelodiscus_sinensis
ENSATEG00000021567	-	92	81.900	ENSPMGG00000013112	-	82	86.911	Periophthalmus_magnuspinnatus
ENSATEG00000021567	-	81	89.691	ENSPMGG00000005467	-	79	89.005	Periophthalmus_magnuspinnatus
ENSATEG00000021567	-	100	84.959	ENSPEMG00000021416	Srsf1	82	87.192	Peromyscus_maniculatus_bairdii
ENSATEG00000021567	-	81	87.374	ENSPCIG00000006076	-	82	87.745	Phascolarctos_cinereus
ENSATEG00000021567	-	97	91.102	ENSPFOG00000018325	-	73	89.216	Poecilia_formosa
ENSATEG00000021567	-	82	91.542	ENSPLAG00000008416	srsf1b	83	88.725	Poecilia_latipinna
ENSATEG00000021567	-	51	81.967	ENSPMEG00000020607	-	98	81.148	Poecilia_mexicana
ENSATEG00000021567	-	82	91.542	ENSPMEG00000002388	-	83	88.725	Poecilia_mexicana
ENSATEG00000021567	-	51	81.967	ENSPMEG00000014312	-	98	81.148	Poecilia_mexicana
ENSATEG00000021567	-	80	89.062	ENSPREG00000009667	srsf1a	81	86.869	Poecilia_reticulata
ENSATEG00000021567	-	100	84.959	ENSPPYG00000008240	SRSF1	82	87.192	Pongo_abelii
ENSATEG00000021567	-	81	88.325	ENSPCAG00000005199	SRSF1	82	87.192	Procavia_capensis
ENSATEG00000021567	-	83	71.921	ENSPCOG00000025736	-	95	73.575	Propithecus_coquereli
ENSATEG00000021567	-	100	84.959	ENSPCOG00000023654	-	99	87.500	Propithecus_coquereli
ENSATEG00000021567	-	56	97.143	ENSPVAG00000000519	-	54	97.143	Pteropus_vampyrus
ENSATEG00000021567	-	81	90.722	ENSPNAG00000022241	srsf1a	82	88.500	Pygocentrus_nattereri
ENSATEG00000021567	-	81	89.691	ENSPNAG00000014601	srsf1b	80	88.660	Pygocentrus_nattereri
ENSATEG00000021567	-	81	88.325	ENSRNOG00000050323	Srsf1	82	87.192	Rattus_norvegicus
ENSATEG00000021567	-	100	84.959	ENSRBIG00000034445	-	99	87.500	Rhinopithecus_bieti
ENSATEG00000021567	-	100	84.959	ENSRROG00000041506	-	99	87.500	Rhinopithecus_roxellana
ENSATEG00000021567	-	100	84.959	ENSSBOG00000025377	-	99	87.500	Saimiri_boliviensis_boliviensis
ENSATEG00000021567	-	81	87.374	ENSSHAG00000002552	-	82	87.745	Sarcophilus_harrisii
ENSATEG00000021567	-	81	89.691	ENSSFOG00015004800	srsf1a	79	89.175	Scleropages_formosus
ENSATEG00000021567	-	80	88.542	ENSSMAG00000007018	-	81	85.859	Scophthalmus_maximus
ENSATEG00000021567	-	81	89.706	ENSSMAG00000009719	-	82	86.190	Scophthalmus_maximus
ENSATEG00000021567	-	100	76.327	ENSSDUG00000003929	-	86	80.583	Seriola_dumerili
ENSATEG00000021567	-	92	83.333	ENSSDUG00000011303	-	86	85.859	Seriola_dumerili
ENSATEG00000021567	-	80	88.542	ENSSLDG00000010543	-	81	85.859	Seriola_lalandi_dorsalis
ENSATEG00000021567	-	95	77.056	ENSSLDG00000016895	-	78	82.796	Seriola_lalandi_dorsalis
ENSATEG00000021567	-	81	84.536	ENSSLDG00000016868	-	81	78.607	Seriola_lalandi_dorsalis
ENSATEG00000021567	-	76	89.130	ENSSARG00000010949	-	63	88.587	Sorex_araneus
ENSATEG00000021567	-	100	84.146	ENSSPUG00000000804	-	96	85.263	Sphenodon_punctatus
ENSATEG00000021567	-	82	88.995	ENSSPAG00000014152	-	93	88.797	Stegastes_partitus
ENSATEG00000021567	-	80	88.083	ENSSPAG00000022562	-	81	87.437	Stegastes_partitus
ENSATEG00000021567	-	100	84.959	ENSSSCG00000017626	-	82	87.192	Sus_scrofa
ENSATEG00000021567	-	54	87.218	ENSTGUG00000008416	-	76	84.892	Taeniopygia_guttata
ENSATEG00000021567	-	80	88.021	ENSTRUG00000003691	srsf1a	81	85.859	Takifugu_rubripes
ENSATEG00000021567	-	80	88.021	ENSTNIG00000016223	srsf1a	80	85.859	Tetraodon_nigroviridis
ENSATEG00000021567	-	76	86.413	ENSTBEG00000015378	-	63	86.957	Tupaia_belangeri
ENSATEG00000021567	-	54	88.636	ENSTTRG00000007310	SRSF1	75	86.957	Tursiops_truncatus
ENSATEG00000021567	-	81	88.325	ENSUAMG00000009858	SRSF1	82	87.192	Ursus_americanus
ENSATEG00000021567	-	100	84.959	ENSUMAG00000000455	-	80	87.192	Ursus_maritimus
ENSATEG00000021567	-	81	87.817	ENSVPAG00000010094	SRSF1	82	86.700	Vicugna_pacos
ENSATEG00000021567	-	100	84.959	ENSVVUG00000011882	-	80	87.192	Vulpes_vulpes
ENSATEG00000021567	-	81	90.722	ENSXETG00000008954	srsf1	83	79.279	Xenopus_tropicalis
ENSATEG00000021567	-	80	89.062	ENSXMAG00000011766	srsf1a	81	86.869	Xiphophorus_maculatus