EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000021677 (Gene tree)
Gene ID: 113164242
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 15569 bases
Position: chrOOHO01000004.1:46469098-46484666
Accession: 17854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000031443	Upf2	PF04050.14	1.2e-32	1	1
ENSATEP00000031443	MIF4G	PF02854.19	1.2e-76	1	3
ENSATEP00000031443	MIF4G	PF02854.19	1.2e-76	2	3
ENSATEP00000031443	MIF4G	PF02854.19	1.2e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000031909	UPF2-201	3898	-	ENSATEP00000031443	1286 (aa)	-	-

Gene Model

Click here to download ENSATEG00000021677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000021677's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000021677	UPF2	99	82.490	ENSG00000151461	UPF2	100	82.284	Homo_sapiens
ENSATEG00000021677	UPF2	99	90.752	ENSAPOG00000015837	UPF2	100	90.361	Acanthochromis_polyacanthus
ENSATEG00000021677	UPF2	99	82.944	ENSAMEG00000004586	UPF2	100	82.893	Ailuropoda_melanoleuca
ENSATEG00000021677	UPF2	99	96.552	ENSACIG00000018078	UPF2	100	96.552	Amphilophus_citrinellus
ENSATEG00000021677	UPF2	99	96.557	ENSAOCG00000016766	UPF2	100	96.557	Amphiprion_ocellaris
ENSATEG00000021677	UPF2	99	96.635	ENSAPEG00000019084	UPF2	100	96.635	Amphiprion_percula
ENSATEG00000021677	UPF2	99	78.837	ENSAPLG00000010287	UPF2	90	83.133	Anas_platyrhynchos
ENSATEG00000021677	UPF2	99	82.866	ENSACAG00000009259	UPF2	100	82.893	Anolis_carolinensis
ENSATEG00000021677	UPF2	97	76.640	ENSANAG00000028451	UPF2	93	78.894	Aotus_nancymaae
ENSATEG00000021677	UPF2	99	96.870	ENSACLG00000012696	UPF2	100	96.870	Astatotilapia_calliptera
ENSATEG00000021677	UPF2	99	89.375	ENSAMXG00000013700	UPF2	99	89.297	Astyanax_mexicanus
ENSATEG00000021677	UPF2	99	82.710	ENSBTAG00000000288	UPF2	100	82.737	Bos_taurus
ENSATEG00000021677	UPF2	99	82.165	ENSCJAG00000020685	UPF2	100	81.726	Callithrix_jacchus
ENSATEG00000021677	UPF2	99	82.866	ENSCAFG00000004839	UPF2	100	82.893	Canis_familiaris
ENSATEG00000021677	UPF2	94	86.364	ENSCAFG00020005882	UPF2	99	87.000	Canis_lupus_dingo
ENSATEG00000021677	UPF2	99	82.866	ENSCHIG00000020359	UPF2	100	82.815	Capra_hircus
ENSATEG00000021677	UPF2	99	82.710	ENSTSYG00000000935	UPF2	97	86.667	Carlito_syrichta
ENSATEG00000021677	UPF2	91	74.552	ENSCAPG00000016658	UPF2	95	74.361	Cavia_aperea
ENSATEG00000021677	UPF2	99	80.141	ENSCPOG00000008809	UPF2	100	80.094	Cavia_porcellus
ENSATEG00000021677	UPF2	99	76.012	ENSCCAG00000035991	UPF2	100	75.661	Cebus_capucinus
ENSATEG00000021677	UPF2	99	82.724	ENSCATG00000032679	UPF2	100	82.517	Cercocebus_atys
ENSATEG00000021677	UPF2	99	81.995	ENSCLAG00000011434	UPF2	100	81.946	Chinchilla_lanigera
ENSATEG00000021677	UPF2	99	82.646	ENSCSAG00000013372	UPF2	100	82.440	Chlorocebus_sabaeus
ENSATEG00000021677	UPF2	78	88.717	ENSCHOG00000000422	UPF2	81	88.717	Choloepus_hoffmanni
ENSATEG00000021677	UPF2	99	80.938	ENSCPBG00000027823	UPF2	100	80.811	Chrysemys_picta_bellii
ENSATEG00000021677	UPF2	78	49.607	ENSCSAVG00000007772	-	99	48.966	Ciona_savignyi
ENSATEG00000021677	UPF2	99	77.572	ENSCANG00000040396	UPF2	100	77.683	Colobus_angolensis_palliatus
ENSATEG00000021677	UPF2	99	82.399	ENSCGRG00001019347	Upf2	100	82.426	Cricetulus_griseus_chok1gshd
ENSATEG00000021677	UPF2	99	82.399	ENSCGRG00000017993	Upf2	100	82.426	Cricetulus_griseus_crigri
ENSATEG00000021677	UPF2	99	85.625	ENSCSEG00000003520	UPF2	99	85.243	Cynoglossus_semilaevis
ENSATEG00000021677	UPF2	99	94.401	ENSCVAG00000006167	UPF2	100	93.849	Cyprinodon_variegatus
ENSATEG00000021677	UPF2	99	82.788	ENSDNOG00000018160	UPF2	100	82.737	Dasypus_novemcinctus
ENSATEG00000021677	UPF2	99	82.399	ENSDORG00000002478	Upf2	100	82.504	Dipodomys_ordii
ENSATEG00000021677	UPF2	89	35.575	FBgn0029992	Upf2	73	39.274	Drosophila_melanogaster
ENSATEG00000021677	UPF2	72	92.647	ENSETEG00000011583	-	62	92.647	Echinops_telfairi
ENSATEG00000021677	UPF2	64	71.523	ENSEBUG00000012448	-	93	68.012	Eptatretus_burgeri
ENSATEG00000021677	UPF2	99	82.229	ENSEASG00005019274	UPF2	100	82.367	Equus_asinus_asinus
ENSATEG00000021677	UPF2	99	82.229	ENSECAG00000017022	UPF2	100	82.179	Equus_caballus
ENSATEG00000021677	UPF2	81	74.688	ENSEEUG00000007819	UPF2	74	75.281	Erinaceus_europaeus
ENSATEG00000021677	UPF2	99	89.236	ENSELUG00000012014	UPF2	100	91.342	Esox_lucius
ENSATEG00000021677	UPF2	99	86.339	ENSFCAG00000005785	UPF2	100	82.815	Felis_catus
ENSATEG00000021677	UPF2	99	83.761	ENSFALG00000001889	UPF2	98	83.683	Ficedula_albicollis
ENSATEG00000021677	UPF2	99	81.450	ENSFDAG00000014348	UPF2	100	81.323	Fukomys_damarensis
ENSATEG00000021677	UPF2	99	94.479	ENSFHEG00000009826	UPF2	100	94.085	Fundulus_heteroclitus
ENSATEG00000021677	UPF2	90	89.301	ENSGMOG00000005557	UPF2	100	88.171	Gadus_morhua
ENSATEG00000021677	UPF2	99	83.916	ENSGALG00000033772	UPF2	100	83.761	Gallus_gallus
ENSATEG00000021677	UPF2	99	93.662	ENSGAFG00000020867	UPF2	100	93.271	Gambusia_affinis
ENSATEG00000021677	UPF2	99	92.662	ENSGACG00000001080	UPF2	100	93.911	Gasterosteus_aculeatus
ENSATEG00000021677	UPF2	99	82.399	ENSGAGG00000002700	UPF2	100	82.271	Gopherus_agassizii
ENSATEG00000021677	UPF2	99	82.490	ENSGGOG00000001479	UPF2	100	82.284	Gorilla_gorilla
ENSATEG00000021677	UPF2	99	96.787	ENSHBUG00000004249	UPF2	100	96.787	Haplochromis_burtoni
ENSATEG00000021677	UPF2	99	81.684	ENSHGLG00000015176	-	100	81.634	Heterocephalus_glaber_female
ENSATEG00000021677	UPF2	99	72.678	ENSHGLG00000003822	-	99	72.756	Heterocephalus_glaber_female
ENSATEG00000021677	UPF2	99	79.313	ENSHGLG00100010036	UPF2	100	77.691	Heterocephalus_glaber_male
ENSATEG00000021677	UPF2	99	91.121	ENSHCOG00000004025	UPF2	99	91.044	Hippocampus_comes
ENSATEG00000021677	UPF2	99	88.231	ENSIPUG00000015524	UPF2	100	88.066	Ictalurus_punctatus
ENSATEG00000021677	UPF2	99	82.632	ENSSTOG00000013075	UPF2	100	82.582	Ictidomys_tridecemlineatus
ENSATEG00000021677	UPF2	99	79.517	ENSJJAG00000004913	Upf2	100	81.946	Jaculus_jaculus
ENSATEG00000021677	UPF2	99	94.479	ENSKMAG00000001071	UPF2	100	94.479	Kryptolebias_marmoratus
ENSATEG00000021677	UPF2	99	95.622	ENSLBEG00000016394	-	99	95.622	Labrus_bergylta
ENSATEG00000021677	UPF2	79	92.360	ENSLBEG00000000728	-	94	92.270	Labrus_bergylta
ENSATEG00000021677	UPF2	99	76.845	ENSLACG00000015945	UPF2	100	77.354	Latimeria_chalumnae
ENSATEG00000021677	UPF2	99	88.758	ENSLOCG00000015698	UPF2	100	88.522	Lepisosteus_oculatus
ENSATEG00000021677	UPF2	99	82.724	ENSMFAG00000043865	UPF2	100	82.517	Macaca_fascicularis
ENSATEG00000021677	UPF2	99	82.724	ENSMMUG00000008241	UPF2	100	82.517	Macaca_mulatta
ENSATEG00000021677	UPF2	79	83.333	ENSMNEG00000008062	UPF2	99	83.041	Macaca_nemestrina
ENSATEG00000021677	UPF2	99	78.692	ENSMLEG00000036120	UPF2	100	80.389	Mandrillus_leucophaeus
ENSATEG00000021677	UPF2	99	96.714	ENSMAMG00000018276	UPF2	100	96.714	Mastacembelus_armatus
ENSATEG00000021677	UPF2	99	96.870	ENSMZEG00005021595	UPF2	100	96.870	Maylandia_zebra
ENSATEG00000021677	UPF2	99	83.294	ENSMGAG00000004573	UPF2	99	83.138	Meleagris_gallopavo
ENSATEG00000021677	UPF2	99	80.374	ENSMAUG00000016512	Upf2	100	80.404	Mesocricetus_auratus
ENSATEG00000021677	UPF2	94	86.869	ENSMICG00000001716	UPF2	99	87.000	Microcebus_murinus
ENSATEG00000021677	UPF2	99	81.606	ENSMOCG00000008263	Upf2	100	81.712	Microtus_ochrogaster
ENSATEG00000021677	UPF2	99	89.498	ENSMMOG00000006528	UPF2	100	89.342	Mola_mola
ENSATEG00000021677	UPF2	99	80.763	ENSMODG00000016794	UPF2	100	82.815	Monodelphis_domestica
ENSATEG00000021677	UPF2	99	95.376	ENSMALG00000002663	UPF2	100	95.376	Monopterus_albus
ENSATEG00000021677	UPF2	99	82.243	MGP_CAROLIEiJ_G0023157	Upf2	99	84.416	Mus_caroli
ENSATEG00000021677	UPF2	99	82.555	ENSMUSG00000043241	Upf2	100	82.582	Mus_musculus
ENSATEG00000021677	UPF2	99	82.632	MGP_PahariEiJ_G0019217	Upf2	100	82.959	Mus_pahari
ENSATEG00000021677	UPF2	99	82.788	MGP_SPRETEiJ_G0024075	Upf2	100	82.959	Mus_spretus
ENSATEG00000021677	UPF2	99	82.944	ENSMPUG00000001064	UPF2	100	82.893	Mustela_putorius_furo
ENSATEG00000021677	UPF2	99	82.321	ENSMLUG00000000228	UPF2	100	82.376	Myotis_lucifugus
ENSATEG00000021677	UPF2	99	96.792	ENSNBRG00000013629	UPF2	100	96.792	Neolamprologus_brichardi
ENSATEG00000021677	UPF2	99	82.568	ENSNLEG00000012058	UPF2	100	82.362	Nomascus_leucogenys
ENSATEG00000021677	UPF2	72	93.662	ENSOPRG00000006801	-	73	93.662	Ochotona_princeps
ENSATEG00000021677	UPF2	99	81.712	ENSODEG00000001290	UPF2	100	81.634	Octodon_degus
ENSATEG00000021677	UPF2	99	96.479	ENSONIG00000017991	UPF2	100	96.479	Oreochromis_niloticus
ENSATEG00000021677	UPF2	99	81.663	ENSOCUG00000006230	UPF2	100	80.605	Oryctolagus_cuniculus
ENSATEG00000021677	UPF2	99	92.729	ENSORLG00000017189	UPF2	100	92.963	Oryzias_latipes
ENSATEG00000021677	UPF2	99	92.807	ENSORLG00020005969	UPF2	100	93.041	Oryzias_latipes_hni
ENSATEG00000021677	UPF2	99	92.807	ENSORLG00015005713	UPF2	100	93.041	Oryzias_latipes_hsok
ENSATEG00000021677	UPF2	99	89.577	ENSOMEG00000023420	UPF2	98	89.498	Oryzias_melastigma
ENSATEG00000021677	UPF2	99	83.022	ENSOGAG00000005796	UPF2	100	82.582	Otolemur_garnettii
ENSATEG00000021677	UPF2	99	82.737	ENSOARG00000014587	UPF2	100	82.686	Ovis_aries
ENSATEG00000021677	UPF2	99	78.000	ENSPPAG00000037953	UPF2	100	79.689	Pan_paniscus
ENSATEG00000021677	UPF2	99	82.866	ENSPPRG00000000690	UPF2	100	82.815	Panthera_pardus
ENSATEG00000021677	UPF2	99	82.866	ENSPTIG00000008867	UPF2	100	82.815	Panthera_tigris_altaica
ENSATEG00000021677	UPF2	99	82.490	ENSPTRG00000002291	UPF2	100	82.284	Pan_troglodytes
ENSATEG00000021677	UPF2	99	82.724	ENSPANG00000023399	UPF2	100	82.517	Papio_anubis
ENSATEG00000021677	UPF2	99	87.910	ENSPKIG00000025502	UPF2	100	86.505	Paramormyrops_kingsleyae
ENSATEG00000021677	UPF2	59	81.686	ENSPSIG00000015158	UPF2	95	81.555	Pelodiscus_sinensis
ENSATEG00000021677	UPF2	99	89.890	ENSPMGG00000005259	UPF2	100	89.890	Periophthalmus_magnuspinnatus
ENSATEG00000021677	UPF2	92	77.233	ENSPEMG00000015731	Upf2	99	77.233	Peromyscus_maniculatus_bairdii
ENSATEG00000021677	UPF2	99	82.737	ENSPCIG00000006656	UPF2	100	82.659	Phascolarctos_cinereus
ENSATEG00000021677	UPF2	99	93.897	ENSPFOG00000017118	UPF2	100	93.505	Poecilia_formosa
ENSATEG00000021677	UPF2	99	93.975	ENSPLAG00000005094	UPF2	100	93.584	Poecilia_latipinna
ENSATEG00000021677	UPF2	99	93.818	ENSPMEG00000017009	UPF2	100	93.427	Poecilia_mexicana
ENSATEG00000021677	UPF2	99	92.006	ENSPREG00000021880	UPF2	100	92.006	Poecilia_reticulata
ENSATEG00000021677	UPF2	65	84.734	ENSPPYG00000002089	-	100	84.770	Pongo_abelii
ENSATEG00000021677	UPF2	99	70.483	ENSPCAG00000000684	UPF2	100	70.373	Procavia_capensis
ENSATEG00000021677	UPF2	99	80.109	ENSPCOG00000021656	UPF2	100	80.140	Propithecus_coquereli
ENSATEG00000021677	UPF2	99	76.342	ENSPVAG00000017286	UPF2	100	76.301	Pteropus_vampyrus
ENSATEG00000021677	UPF2	99	94.201	ENSPNYG00000017096	UPF2	100	94.201	Pundamilia_nyererei
ENSATEG00000021677	UPF2	99	89.634	ENSPNAG00000009357	UPF2	100	89.478	Pygocentrus_nattereri
ENSATEG00000021677	UPF2	99	78.632	ENSRNOG00000023593	Upf2	100	94.444	Rattus_norvegicus
ENSATEG00000021677	UPF2	99	81.513	ENSRBIG00000037780	UPF2	100	81.231	Rhinopithecus_bieti
ENSATEG00000021677	UPF2	99	82.490	ENSRROG00000043547	UPF2	100	82.207	Rhinopithecus_roxellana
ENSATEG00000021677	UPF2	99	81.854	ENSSBOG00000020012	UPF2	100	81.337	Saimiri_boliviensis_boliviensis
ENSATEG00000021677	UPF2	99	87.207	ENSSFOG00015023788	upf2	100	87.207	Scleropages_formosus
ENSATEG00000021677	UPF2	89	92.288	ENSSMAG00000007637	UPF2	100	91.848	Scophthalmus_maximus
ENSATEG00000021677	UPF2	99	96.873	ENSSDUG00000017244	UPF2	99	96.873	Seriola_dumerili
ENSATEG00000021677	UPF2	99	93.417	ENSSLDG00000016866	UPF2	100	93.574	Seriola_lalandi_dorsalis
ENSATEG00000021677	UPF2	99	81.698	ENSSARG00000008615	UPF2	100	81.804	Sorex_araneus
ENSATEG00000021677	UPF2	99	80.623	ENSSPUG00000014544	UPF2	99	80.467	Sphenodon_punctatus
ENSATEG00000021677	UPF2	68	84.493	ENSSSCG00000011117	-	99	84.528	Sus_scrofa
ENSATEG00000021677	UPF2	99	83.528	ENSTGUG00000002163	-	100	83.476	Taeniopygia_guttata
ENSATEG00000021677	UPF2	99	93.901	ENSTRUG00000007519	UPF2	99	93.901	Takifugu_rubripes
ENSATEG00000021677	UPF2	99	90.625	ENSTNIG00000004453	UPF2	100	90.156	Tetraodon_nigroviridis
ENSATEG00000021677	UPF2	92	74.937	ENSTBEG00000012679	UPF2	93	74.812	Tupaia_belangeri
ENSATEG00000021677	UPF2	99	81.761	ENSTTRG00000016388	UPF2	100	81.712	Tursiops_truncatus
ENSATEG00000021677	UPF2	86	94.382	ENSUAMG00000023560	UPF2	98	94.382	Ursus_americanus
ENSATEG00000021677	UPF2	99	82.944	ENSUMAG00000012953	UPF2	95	82.893	Ursus_maritimus
ENSATEG00000021677	UPF2	82	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSATEG00000021677	UPF2	99	82.866	ENSVVUG00000006166	UPF2	100	82.893	Vulpes_vulpes
ENSATEG00000021677	UPF2	99	79.549	ENSXETG00000033103	UPF2	91	84.079	Xenopus_tropicalis
ENSATEG00000021677	UPF2	99	93.809	ENSXCOG00000011604	UPF2	100	93.417	Xiphophorus_couchianus
ENSATEG00000021677	UPF2	99	93.975	ENSXMAG00000017209	UPF2	100	93.584	Xiphophorus_maculatus