EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000021911 (Gene tree)
Gene ID: 113164911
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 8230 bases
Position: chrOOHO01000004.1:33496456-33504685
Accession: 113164911
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000031812	MMR_HSR1	PF01926.23	1e-07	1	1
ENSATEP00000031821	MMR_HSR1	PF01926.23	5.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000032279	-	2949	-	ENSATEP00000031812	204 (aa)	XP_026220242	UPI000E457D4E
ENSATET00000032288	-	543	-	ENSATEP00000031821	180 (aa)	-	-

Gene Model

Click here to download ENSATEG00000021911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000021911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000021911	rab18a	79	44.444	ENSATEG00000014851	rab25a	76	44.444
ENSATEG00000021911	rab18a	93	45.641	ENSATEG00000015844	-	96	45.641
ENSATEG00000021911	rab18a	80	41.212	ENSATEG00000025079	rab22a	85	41.212
ENSATEG00000021911	rab18a	90	41.176	ENSATEG00000014748	rab5aa	86	41.176
ENSATEG00000021911	rab18a	89	31.522	ENSATEG00000021300	kras	97	31.522
ENSATEG00000021911	rab18a	80	39.521	ENSATEG00000014958	si:dkey-13a21.4	82	39.521
ENSATEG00000021911	rab18a	80	41.317	ENSATEG00000010784	si:dkey-34d22.5	65	41.317
ENSATEG00000021911	rab18a	82	40.828	ENSATEG00000012781	-	76	40.828
ENSATEG00000021911	rab18a	80	40.000	ENSATEG00000009052	rab42a	76	40.000
ENSATEG00000021911	rab18a	79	37.349	ENSATEG00000004488	rab9b	79	37.349
ENSATEG00000021911	rab18a	71	42.857	ENSATEG00000017702	rab33a	67	42.857
ENSATEG00000021911	rab18a	79	43.558	ENSATEG00000019023	rab15	76	43.558
ENSATEG00000021911	rab18a	85	32.955	ENSATEG00000023047	rab34a	66	32.955
ENSATEG00000021911	rab18a	88	48.370	ENSATEG00000002553	rab2a	97	45.192
ENSATEG00000021911	rab18a	79	45.679	ENSATEG00000023725	-	74	45.679
ENSATEG00000021911	rab18a	79	48.780	ENSATEG00000019683	rab12	67	48.780
ENSATEG00000021911	rab18a	84	35.057	ENSATEG00000001111	rabl2	77	35.057
ENSATEG00000021911	rab18a	79	50.617	ENSATEG00000002479	rab1ba	80	50.617
ENSATEG00000021911	rab18a	72	41.176	ENSATEG00000022993	-	64	41.176
ENSATEG00000021911	rab18a	87	38.547	ENSATEG00000012459	-	84	38.547
ENSATEG00000021911	rab18a	79	31.928	ENSATEG00000008796	dnajc27	61	31.928
ENSATEG00000021911	rab18a	79	32.934	ENSATEG00000024739	RAB29	81	32.934
ENSATEG00000021911	rab18a	95	46.939	ENSATEG00000008052	rab1ab	96	46.939
ENSATEG00000021911	rab18a	79	50.617	ENSATEG00000003430	zgc:171927	75	50.617
ENSATEG00000021911	rab18a	82	35.294	ENSATEG00000012108	si:ch73-116o1.2	83	34.682
ENSATEG00000021911	rab18a	79	45.062	ENSATEG00000006124	rab25b	77	45.062
ENSATEG00000021911	rab18a	83	45.614	ENSATEG00000019238	si:dkey-16l2.16	81	45.614
ENSATEG00000021911	rab18a	84	37.791	ENSATEG00000020913	rab23	75	38.312
ENSATEG00000021911	rab18a	87	32.240	ENSATEG00000008400	rras	81	36.025
ENSATEG00000021911	rab18a	77	32.099	ENSATEG00000020171	rheb	85	32.099
ENSATEG00000021911	rab18a	73	36.000	ENSATEG00000007298	rras2	79	36.025
ENSATEG00000021911	rab18a	79	45.679	ENSATEG00000023730	rab11ba	74	45.679
ENSATEG00000021911	rab18a	79	31.098	ENSATEG00000004893	si:cabz01085950.1	81	31.098
ENSATEG00000021911	rab18a	86	37.430	ENSATEG00000016312	rab33ba	76	37.430
ENSATEG00000021911	rab18a	71	40.136	ENSATEG00000007761	zgc:101559	63	40.136
ENSATEG00000021911	rab18a	80	48.171	ENSATEG00000018600	rab14	76	48.171
ENSATEG00000021911	rab18a	80	44.242	ENSATEG00000001937	rab5c	83	42.051
ENSATEG00000021911	rab18a	85	30.726	ENSATEG00000017315	-	93	30.726
ENSATEG00000021911	rab18a	83	50.000	ENSATEG00000010475	rab30	83	50.000
ENSATEG00000021911	rab18a	60	38.525	ENSATEG00000006851	rab34b	50	38.525
ENSATEG00000021911	rab18a	79	45.679	ENSATEG00000017696	rab11bb	74	45.679
ENSATEG00000021911	rab18a	79	45.062	ENSATEG00000022531	rab11a	75	45.062
ENSATEG00000021911	rab18a	79	36.747	ENSATEG00000013396	rab9a	82	36.747
ENSATEG00000021911	rab18a	80	46.951	ENSATEG00000012604	-	76	46.951
ENSATEG00000021911	rab18a	80	37.725	ENSATEG00000017237	RAB7A	81	37.725
ENSATEG00000021911	rab18a	88	43.243	ENSATEG00000023662	-	90	43.243
ENSATEG00000021911	rab18a	80	37.725	ENSATEG00000002860	RAB7A	81	37.725
ENSATEG00000021911	rab18a	95	40.196	ENSATEG00000006156	rab11al	93	40.196
ENSATEG00000021911	rab18a	81	32.530	ENSATEG00000020001	hrasb	87	32.530
ENSATEG00000021911	rab18a	83	39.535	ENSATEG00000009865	RAB39B	81	39.535
ENSATEG00000021911	rab18a	83	39.181	ENSATEG00000015992	rab41	79	39.181
ENSATEG00000021911	rab18a	73	42.667	ENSATEG00000011879	rab6bb	71	42.667
ENSATEG00000021911	rab18a	84	48.256	ENSATEG00000013281	rab35b	85	48.256
ENSATEG00000021911	rab18a	83	39.535	ENSATEG00000013086	-	81	39.535
ENSATEG00000021911	rab18a	74	33.987	ENSATEG00000003390	rab36	58	33.987
ENSATEG00000021911	rab18a	67	30.147	ENSATEG00000000181	arl5c	65	30.147
ENSATEG00000021911	rab18a	94	33.333	ENSATEG00000018261	RAB9A	90	33.333
ENSATEG00000021911	rab18a	99	82.353	ENSATEG00000002952	rab18b	99	82.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000021911	rab18a	100	98.529	ENSAPOG00000010760	rab18a	100	98.529	Acanthochromis_polyacanthus
ENSATEG00000021911	rab18a	100	95.556	ENSACIG00000009617	rab18a	100	95.556	Amphilophus_citrinellus
ENSATEG00000021911	rab18a	100	98.039	ENSAOCG00000016233	rab18a	100	98.039	Amphiprion_ocellaris
ENSATEG00000021911	rab18a	100	98.039	ENSAPEG00000005392	rab18a	100	98.039	Amphiprion_percula
ENSATEG00000021911	rab18a	100	88.293	ENSACAG00000005463	-	100	88.293	Anolis_carolinensis
ENSATEG00000021911	rab18a	100	96.569	ENSACLG00000011484	rab18a	100	96.569	Astatotilapia_calliptera
ENSATEG00000021911	rab18a	96	71.144	ENSCPBG00000027619	-	98	71.144	Chrysemys_picta_bellii
ENSATEG00000021911	rab18a	100	86.893	ENSCPBG00000015839	-	100	86.893	Chrysemys_picta_bellii
ENSATEG00000021911	rab18a	97	75.879	ENSCING00000006838	-	99	75.879	Ciona_intestinalis
ENSATEG00000021911	rab18a	97	74.874	ENSCSAVG00000010348	-	99	74.874	Ciona_savignyi
ENSATEG00000021911	rab18a	100	97.549	ENSCSEG00000011816	rab18a	100	97.549	Cynoglossus_semilaevis
ENSATEG00000021911	rab18a	94	93.750	ENSCVAG00000015451	rab18a	100	93.137	Cyprinodon_variegatus
ENSATEG00000021911	rab18a	100	81.951	ENSDARG00000055291	rab18a	100	81.951	Danio_rerio
ENSATEG00000021911	rab18a	100	93.171	ENSELUG00000003805	rab18a	100	93.171	Esox_lucius
ENSATEG00000021911	rab18a	94	95.312	ENSFHEG00000019455	rab18a	100	94.608	Fundulus_heteroclitus
ENSATEG00000021911	rab18a	94	94.241	ENSGAFG00000002790	rab18a	100	93.137	Gambusia_affinis
ENSATEG00000021911	rab18a	100	86.893	ENSGAGG00000015642	-	100	86.893	Gopherus_agassizii
ENSATEG00000021911	rab18a	100	96.569	ENSHBUG00000001518	rab18a	100	96.569	Haplochromis_burtoni
ENSATEG00000021911	rab18a	99	97.537	ENSLBEG00000005861	rab18a	95	97.537	Labrus_bergylta
ENSATEG00000021911	rab18a	93	90.526	ENSLACG00000009310	rab18a	100	88.350	Latimeria_chalumnae
ENSATEG00000021911	rab18a	100	89.756	ENSLOCG00000007491	rab18a	100	89.756	Lepisosteus_oculatus
ENSATEG00000021911	rab18a	100	97.059	ENSMAMG00000014320	rab18a	100	97.059	Mastacembelus_armatus
ENSATEG00000021911	rab18a	100	96.078	ENSMZEG00005017235	rab18a	100	96.078	Maylandia_zebra
ENSATEG00000021911	rab18a	100	99.510	ENSMALG00000009813	rab18a	100	99.510	Monopterus_albus
ENSATEG00000021911	rab18a	100	96.569	ENSNBRG00000013507	rab18a	100	96.569	Neolamprologus_brichardi
ENSATEG00000021911	rab18a	94	94.271	ENSORLG00000004624	rab18a	100	94.118	Oryzias_latipes
ENSATEG00000021911	rab18a	94	94.792	ENSORLG00020008333	rab18a	100	94.608	Oryzias_latipes_hni
ENSATEG00000021911	rab18a	94	94.271	ENSORLG00015004739	rab18a	100	94.118	Oryzias_latipes_hsok
ENSATEG00000021911	rab18a	100	94.118	ENSOMEG00000020605	rab18a	100	94.118	Oryzias_melastigma
ENSATEG00000021911	rab18a	100	87.805	ENSPKIG00000009825	rab18a	100	87.805	Paramormyrops_kingsleyae
ENSATEG00000021911	rab18a	100	92.647	ENSPMGG00000020409	-	100	92.647	Periophthalmus_magnuspinnatus
ENSATEG00000021911	rab18a	94	94.764	ENSPFOG00000007571	rab18a	100	93.627	Poecilia_formosa
ENSATEG00000021911	rab18a	94	94.764	ENSPLAG00000010104	rab18a	100	93.627	Poecilia_latipinna
ENSATEG00000021911	rab18a	94	94.764	ENSPMEG00000013085	rab18a	100	93.627	Poecilia_mexicana
ENSATEG00000021911	rab18a	94	94.764	ENSPREG00000005923	rab18a	83	93.627	Poecilia_reticulata
ENSATEG00000021911	rab18a	100	96.569	ENSPNYG00000007064	rab18a	100	96.569	Pundamilia_nyererei
ENSATEG00000021911	rab18a	99	81.095	ENSPNAG00000011548	rab18a	100	81.095	Pygocentrus_nattereri
ENSATEG00000021911	rab18a	100	90.732	ENSSFOG00015017444	rab18a	84	90.732	Scleropages_formosus
ENSATEG00000021911	rab18a	94	95.337	ENSSMAG00000002969	rab18a	100	95.122	Scophthalmus_maximus
ENSATEG00000021911	rab18a	100	98.529	ENSSDUG00000003823	rab18a	100	98.529	Seriola_dumerili
ENSATEG00000021911	rab18a	100	98.529	ENSSLDG00000006977	rab18a	100	98.529	Seriola_lalandi_dorsalis
ENSATEG00000021911	rab18a	93	90.476	ENSSPUG00000017677	-	100	87.864	Sphenodon_punctatus
ENSATEG00000021911	rab18a	100	94.118	ENSTRUG00000004984	rab18a	100	94.118	Takifugu_rubripes
ENSATEG00000021911	rab18a	100	88.350	ENSUMAG00000015574	-	100	88.350	Ursus_maritimus
ENSATEG00000021911	rab18a	100	88.835	ENSXETG00000004556	rab18	100	89.320	Xenopus_tropicalis
ENSATEG00000021911	rab18a	94	94.764	ENSXMAG00000024122	rab18a	100	93.627	Xiphophorus_maculatus