EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000022522 (Gene tree)
Gene ID: 113150293
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 13819 bases
Position: chrOOHO01000012.1:7718452-7732270
Accession: 113150293
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000032751	ResIII	PF04851.15	2e-27	1	2
ENSATEP00000032751	ResIII	PF04851.15	2e-27	2	2
ENSATEP00000032751	DEAD	PF00270.29	3.6e-54	1	2
ENSATEP00000032751	DEAD	PF00270.29	3.6e-54	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000033230	-	8989	-	ENSATEP00000032751	2136 (aa)	XP_026198521	UPI000E456F29

Gene Model

Click here to download ENSATEG00000022522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000022522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000022522	snrnp200	72	31.409	ENSATEG00000019181	hfm1	67	31.533
ENSATEG00000022522	snrnp200	80	44.893	ENSATEG00000024950	ascc3	80	44.893

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000022522	snrnp200	99	90.543	ENSG00000144028	SNRNP200	99	90.653	Homo_sapiens
ENSATEG00000022522	snrnp200	100	98.970	ENSAPOG00000010223	snrnp200	100	98.970	Acanthochromis_polyacanthus
ENSATEG00000022522	snrnp200	99	90.590	ENSAMEG00000008996	SNRNP200	99	90.700	Ailuropoda_melanoleuca
ENSATEG00000022522	snrnp200	97	97.803	ENSACIG00000001764	snrnp200	98	97.803	Amphilophus_citrinellus
ENSATEG00000022522	snrnp200	100	98.736	ENSAOCG00000024593	snrnp200	100	98.736	Amphiprion_ocellaris
ENSATEG00000022522	snrnp200	97	98.017	ENSAPEG00000012554	snrnp200	100	98.017	Amphiprion_percula
ENSATEG00000022522	snrnp200	99	90.853	ENSAPLG00000004313	SNRNP200	99	90.918	Anas_platyrhynchos
ENSATEG00000022522	snrnp200	99	90.163	ENSACAG00000000434	SNRNP200	100	90.163	Anolis_carolinensis
ENSATEG00000022522	snrnp200	99	87.763	ENSANAG00000036625	SNRNP200	99	87.863	Aotus_nancymaae
ENSATEG00000022522	snrnp200	100	97.659	ENSACLG00000011188	snrnp200	100	97.659	Astatotilapia_calliptera
ENSATEG00000022522	snrnp200	99	94.781	ENSAMXG00000005684	snrnp200	99	94.781	Astyanax_mexicanus
ENSATEG00000022522	snrnp200	99	90.449	ENSBTAG00000000848	SNRNP200	99	90.559	Bos_taurus
ENSATEG00000022522	snrnp200	99	90.496	ENSCJAG00000007514	SNRNP200	99	90.606	Callithrix_jacchus
ENSATEG00000022522	snrnp200	99	89.827	ENSCAFG00020019979	SNRNP200	99	91.623	Canis_lupus_dingo
ENSATEG00000022522	snrnp200	99	90.403	ENSCHIG00000020611	SNRNP200	99	90.512	Capra_hircus
ENSATEG00000022522	snrnp200	99	90.590	ENSTSYG00000010467	SNRNP200	99	90.700	Carlito_syrichta
ENSATEG00000022522	snrnp200	99	90.080	ENSCAPG00000017234	SNRNP200	99	90.189	Cavia_aperea
ENSATEG00000022522	snrnp200	99	90.403	ENSCPOG00000006776	SNRNP200	99	90.512	Cavia_porcellus
ENSATEG00000022522	snrnp200	99	90.496	ENSCCAG00000033962	SNRNP200	99	90.606	Cebus_capucinus
ENSATEG00000022522	snrnp200	99	90.543	ENSCATG00000015790	SNRNP200	99	90.653	Cercocebus_atys
ENSATEG00000022522	snrnp200	99	90.543	ENSCLAG00000004116	SNRNP200	99	90.653	Chinchilla_lanigera
ENSATEG00000022522	snrnp200	99	90.543	ENSCSAG00000017369	SNRNP200	99	90.653	Chlorocebus_sabaeus
ENSATEG00000022522	snrnp200	73	93.701	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSATEG00000022522	snrnp200	99	90.603	ENSCPBG00000022571	SNRNP200	99	95.000	Chrysemys_picta_bellii
ENSATEG00000022522	snrnp200	99	75.782	ENSCING00000005082	-	99	76.019	Ciona_intestinalis
ENSATEG00000022522	snrnp200	94	90.244	ENSCANG00000033932	SNRNP200	99	90.360	Colobus_angolensis_palliatus
ENSATEG00000022522	snrnp200	99	90.543	ENSCGRG00001022610	Snrnp200	99	90.653	Cricetulus_griseus_chok1gshd
ENSATEG00000022522	snrnp200	99	90.042	ENSCGRG00000016472	Snrnp200	99	90.150	Cricetulus_griseus_crigri
ENSATEG00000022522	snrnp200	99	96.485	ENSCSEG00000016399	snrnp200	100	96.485	Cynoglossus_semilaevis
ENSATEG00000022522	snrnp200	100	91.948	ENSCVAG00000017631	snrnp200	100	91.948	Cyprinodon_variegatus
ENSATEG00000022522	snrnp200	100	94.429	ENSDARG00000077536	snrnp200	99	94.452	Danio_rerio
ENSATEG00000022522	snrnp200	99	89.326	ENSDNOG00000011227	SNRNP200	99	89.432	Dasypus_novemcinctus
ENSATEG00000022522	snrnp200	99	88.084	ENSDORG00000005861	Snrnp200	99	88.186	Dipodomys_ordii
ENSATEG00000022522	snrnp200	100	73.883	FBgn0263599	l(3)72Ab	99	74.204	Drosophila_melanogaster
ENSATEG00000022522	snrnp200	95	90.181	ENSETEG00000000162	SNRNP200	74	90.181	Echinops_telfairi
ENSATEG00000022522	snrnp200	83	81.076	ENSEBUG00000016524	snrnp200	95	81.076	Eptatretus_burgeri
ENSATEG00000022522	snrnp200	99	89.557	ENSEASG00005001884	SNRNP200	99	89.570	Equus_asinus_asinus
ENSATEG00000022522	snrnp200	99	90.590	ENSECAG00000019675	SNRNP200	99	90.700	Equus_caballus
ENSATEG00000022522	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSATEG00000022522	snrnp200	100	96.256	ENSELUG00000018948	snrnp200	100	96.256	Esox_lucius
ENSATEG00000022522	snrnp200	99	90.637	ENSFCAG00000010699	SNRNP200	99	90.747	Felis_catus
ENSATEG00000022522	snrnp200	93	86.607	ENSFALG00000001368	-	94	86.607	Ficedula_albicollis
ENSATEG00000022522	snrnp200	99	90.449	ENSFDAG00000004683	SNRNP200	99	90.559	Fukomys_damarensis
ENSATEG00000022522	snrnp200	100	94.476	ENSFHEG00000003786	snrnp200	100	94.476	Fundulus_heteroclitus
ENSATEG00000022522	snrnp200	100	95.000	ENSGMOG00000004881	snrnp200	99	94.885	Gadus_morhua
ENSATEG00000022522	snrnp200	100	94.710	ENSGAFG00000010807	snrnp200	100	94.710	Gambusia_affinis
ENSATEG00000022522	snrnp200	100	97.431	ENSGACG00000011474	snrnp200	99	97.431	Gasterosteus_aculeatus
ENSATEG00000022522	snrnp200	95	92.771	ENSGAGG00000016069	SNRNP200	97	98.387	Gopherus_agassizii
ENSATEG00000022522	snrnp200	99	90.543	ENSGGOG00000005174	SNRNP200	99	90.653	Gorilla_gorilla
ENSATEG00000022522	snrnp200	97	95.032	ENSHBUG00000011322	snrnp200	99	95.032	Haplochromis_burtoni
ENSATEG00000022522	snrnp200	99	90.496	ENSHGLG00000006654	SNRNP200	99	90.606	Heterocephalus_glaber_female
ENSATEG00000022522	snrnp200	99	90.496	ENSHGLG00100018594	SNRNP200	99	90.606	Heterocephalus_glaber_male
ENSATEG00000022522	snrnp200	99	90.637	ENSSTOG00000016351	SNRNP200	99	90.747	Ictidomys_tridecemlineatus
ENSATEG00000022522	snrnp200	99	90.403	ENSJJAG00000023659	Snrnp200	99	90.512	Jaculus_jaculus
ENSATEG00000022522	snrnp200	100	94.634	ENSKMAG00000003665	snrnp200	100	94.634	Kryptolebias_marmoratus
ENSATEG00000022522	snrnp200	100	97.940	ENSLBEG00000021585	snrnp200	100	97.940	Labrus_bergylta
ENSATEG00000022522	snrnp200	82	91.977	ENSLACG00000000226	SNRNP200	99	92.108	Latimeria_chalumnae
ENSATEG00000022522	snrnp200	100	94.247	ENSLOCG00000015198	snrnp200	99	94.270	Lepisosteus_oculatus
ENSATEG00000022522	snrnp200	99	90.449	ENSLAFG00000015626	SNRNP200	99	90.559	Loxodonta_africana
ENSATEG00000022522	snrnp200	99	90.496	ENSMFAG00000040174	SNRNP200	99	91.570	Macaca_fascicularis
ENSATEG00000022522	snrnp200	99	90.496	ENSMMUG00000023261	SNRNP200	99	90.606	Macaca_mulatta
ENSATEG00000022522	snrnp200	99	90.449	ENSMNEG00000032398	SNRNP200	99	90.559	Macaca_nemestrina
ENSATEG00000022522	snrnp200	99	90.543	ENSMLEG00000019083	SNRNP200	99	91.570	Mandrillus_leucophaeus
ENSATEG00000022522	snrnp200	100	97.567	ENSMAMG00000007851	snrnp200	100	97.567	Mastacembelus_armatus
ENSATEG00000022522	snrnp200	97	95.032	ENSMZEG00005010787	snrnp200	99	95.032	Maylandia_zebra
ENSATEG00000022522	snrnp200	97	90.469	ENSMGAG00000001831	SNRNP200	99	90.590	Meleagris_gallopavo
ENSATEG00000022522	snrnp200	99	90.590	ENSMAUG00000011825	Snrnp200	99	90.700	Mesocricetus_auratus
ENSATEG00000022522	snrnp200	99	90.590	ENSMICG00000004710	SNRNP200	99	90.700	Microcebus_murinus
ENSATEG00000022522	snrnp200	99	88.717	ENSMOCG00000011814	Snrnp200	99	88.821	Microtus_ochrogaster
ENSATEG00000022522	snrnp200	100	96.114	ENSMMOG00000014167	snrnp200	100	96.114	Mola_mola
ENSATEG00000022522	snrnp200	99	90.684	ENSMODG00000008475	SNRNP200	99	90.747	Monodelphis_domestica
ENSATEG00000022522	snrnp200	100	97.940	ENSMALG00000001973	snrnp200	100	97.940	Monopterus_albus
ENSATEG00000022522	snrnp200	99	90.543	MGP_CAROLIEiJ_G0024250	Snrnp200	99	90.653	Mus_caroli
ENSATEG00000022522	snrnp200	99	90.496	ENSMUSG00000003660	Snrnp200	99	90.606	Mus_musculus
ENSATEG00000022522	snrnp200	99	90.496	MGP_PahariEiJ_G0025695	Snrnp200	99	90.606	Mus_pahari
ENSATEG00000022522	snrnp200	99	90.496	MGP_SPRETEiJ_G0025170	Snrnp200	99	92.394	Mus_spretus
ENSATEG00000022522	snrnp200	99	90.637	ENSMPUG00000008949	SNRNP200	99	90.747	Mustela_putorius_furo
ENSATEG00000022522	snrnp200	99	87.360	ENSMLUG00000027511	-	99	87.459	Myotis_lucifugus
ENSATEG00000022522	snrnp200	99	90.276	ENSMLUG00000010493	SNRNP200	99	90.385	Myotis_lucifugus
ENSATEG00000022522	snrnp200	99	90.543	ENSNGAG00000021993	Snrnp200	99	90.653	Nannospalax_galili
ENSATEG00000022522	snrnp200	90	97.620	ENSNBRG00000017960	snrnp200	98	97.620	Neolamprologus_brichardi
ENSATEG00000022522	snrnp200	99	86.285	ENSNLEG00000000025	SNRNP200	99	86.474	Nomascus_leucogenys
ENSATEG00000022522	snrnp200	99	94.845	ENSMEUG00000010532	SNRNP200	78	93.878	Notamacropus_eugenii
ENSATEG00000022522	snrnp200	96	89.446	ENSOPRG00000015464	SNRNP200	99	87.365	Ochotona_princeps
ENSATEG00000022522	snrnp200	99	90.543	ENSODEG00000008366	SNRNP200	99	90.653	Octodon_degus
ENSATEG00000022522	snrnp200	100	97.659	ENSONIG00000010714	snrnp200	100	97.659	Oreochromis_niloticus
ENSATEG00000022522	snrnp200	99	90.496	ENSOCUG00000009864	SNRNP200	99	90.606	Oryctolagus_cuniculus
ENSATEG00000022522	snrnp200	99	96.298	ENSORLG00000012286	snrnp200	100	96.343	Oryzias_latipes
ENSATEG00000022522	snrnp200	99	96.392	ENSORLG00020004648	snrnp200	100	96.392	Oryzias_latipes_hni
ENSATEG00000022522	snrnp200	99	96.439	ENSORLG00015019114	snrnp200	100	96.439	Oryzias_latipes_hsok
ENSATEG00000022522	snrnp200	100	96.770	ENSOMEG00000011834	snrnp200	100	96.770	Oryzias_melastigma
ENSATEG00000022522	snrnp200	99	90.590	ENSOGAG00000006879	SNRNP200	99	90.700	Otolemur_garnettii
ENSATEG00000022522	snrnp200	99	89.705	ENSOARG00000013949	SNRNP200	99	89.812	Ovis_aries
ENSATEG00000022522	snrnp200	99	90.543	ENSPPAG00000041559	SNRNP200	99	90.653	Pan_paniscus
ENSATEG00000022522	snrnp200	99	90.637	ENSPPRG00000004435	SNRNP200	99	90.747	Panthera_pardus
ENSATEG00000022522	snrnp200	99	90.215	ENSPTIG00000006380	SNRNP200	99	90.324	Panthera_tigris_altaica
ENSATEG00000022522	snrnp200	99	90.543	ENSPTRG00000012230	SNRNP200	99	90.653	Pan_troglodytes
ENSATEG00000022522	snrnp200	99	90.590	ENSPANG00000006017	SNRNP200	99	90.700	Papio_anubis
ENSATEG00000022522	snrnp200	100	95.367	ENSPKIG00000014762	snrnp200	99	95.452	Paramormyrops_kingsleyae
ENSATEG00000022522	snrnp200	99	89.799	ENSPSIG00000008580	SNRNP200	99	89.859	Pelodiscus_sinensis
ENSATEG00000022522	snrnp200	99	90.590	ENSPCIG00000023050	SNRNP200	99	90.653	Phascolarctos_cinereus
ENSATEG00000022522	snrnp200	100	97.052	ENSPFOG00000015110	snrnp200	100	97.052	Poecilia_formosa
ENSATEG00000022522	snrnp200	97	97.195	ENSPLAG00000006711	snrnp200	99	97.195	Poecilia_latipinna
ENSATEG00000022522	snrnp200	97	97.140	ENSPMEG00000021166	snrnp200	99	97.140	Poecilia_mexicana
ENSATEG00000022522	snrnp200	100	97.004	ENSPREG00000008875	snrnp200	100	97.004	Poecilia_reticulata
ENSATEG00000022522	snrnp200	99	90.543	ENSPPYG00000012068	SNRNP200	99	90.653	Pongo_abelii
ENSATEG00000022522	snrnp200	97	95.513	ENSPCAG00000008536	SNRNP200	85	97.872	Procavia_capensis
ENSATEG00000022522	snrnp200	99	90.543	ENSPCOG00000024608	SNRNP200	99	90.653	Propithecus_coquereli
ENSATEG00000022522	snrnp200	96	90.788	ENSPVAG00000005860	SNRNP200	92	91.031	Pteropus_vampyrus
ENSATEG00000022522	snrnp200	100	92.857	ENSPNYG00000017476	snrnp200	100	92.857	Pundamilia_nyererei
ENSATEG00000022522	snrnp200	100	90.641	ENSPNAG00000010998	snrnp200	99	90.695	Pygocentrus_nattereri
ENSATEG00000022522	snrnp200	99	90.590	ENSRNOG00000012157	Snrnp200	99	90.700	Rattus_norvegicus
ENSATEG00000022522	snrnp200	99	90.543	ENSRBIG00000044690	-	99	90.653	Rhinopithecus_bieti
ENSATEG00000022522	snrnp200	99	90.543	ENSRROG00000037952	-	99	90.653	Rhinopithecus_roxellana
ENSATEG00000022522	snrnp200	99	90.496	ENSSBOG00000035471	SNRNP200	99	90.606	Saimiri_boliviensis_boliviensis
ENSATEG00000022522	snrnp200	97	90.421	ENSSHAG00000000758	SNRNP200	99	90.492	Sarcophilus_harrisii
ENSATEG00000022522	snrnp200	99	95.442	ENSSFOG00015018826	snrnp200	99	95.442	Scleropages_formosus
ENSATEG00000022522	snrnp200	100	98.221	ENSSMAG00000005463	snrnp200	100	98.221	Scophthalmus_maximus
ENSATEG00000022522	snrnp200	100	99.017	ENSSDUG00000021410	snrnp200	100	99.017	Seriola_dumerili
ENSATEG00000022522	snrnp200	100	98.876	ENSSLDG00000010884	snrnp200	100	98.876	Seriola_lalandi_dorsalis
ENSATEG00000022522	snrnp200	95	88.740	ENSSARG00000010728	SNRNP200	96	88.710	Sorex_araneus
ENSATEG00000022522	snrnp200	99	90.918	ENSSPUG00000003726	-	99	90.982	Sphenodon_punctatus
ENSATEG00000022522	snrnp200	100	99.017	ENSSPAG00000001842	snrnp200	100	99.017	Stegastes_partitus
ENSATEG00000022522	snrnp200	99	90.637	ENSSSCG00000008127	SNRNP200	99	90.747	Sus_scrofa
ENSATEG00000022522	snrnp200	99	82.209	ENSTGUG00000014475	-	100	82.209	Taeniopygia_guttata
ENSATEG00000022522	snrnp200	100	97.097	ENSTRUG00000001307	snrnp200	100	97.097	Takifugu_rubripes
ENSATEG00000022522	snrnp200	99	92.287	ENSTNIG00000004320	snrnp200	99	84.850	Tetraodon_nigroviridis
ENSATEG00000022522	snrnp200	82	92.958	ENSTBEG00000003329	-	67	92.958	Tupaia_belangeri
ENSATEG00000022522	snrnp200	99	90.403	ENSTTRG00000004983	SNRNP200	99	90.512	Tursiops_truncatus
ENSATEG00000022522	snrnp200	75	83.915	ENSUAMG00000008395	-	95	83.624	Ursus_americanus
ENSATEG00000022522	snrnp200	99	90.637	ENSUMAG00000012385	SNRNP200	99	90.747	Ursus_maritimus
ENSATEG00000022522	snrnp200	87	93.776	ENSVPAG00000006434	SNRNP200	66	93.776	Vicugna_pacos
ENSATEG00000022522	snrnp200	99	90.425	ENSVVUG00000026247	SNRNP200	99	90.534	Vulpes_vulpes
ENSATEG00000022522	snrnp200	99	90.318	ENSXETG00000001243	snrnp200	99	90.380	Xenopus_tropicalis
ENSATEG00000022522	snrnp200	97	97.267	ENSXMAG00000002058	snrnp200	98	97.267	Xiphophorus_maculatus