EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000022887 (Gene tree)
Gene ID: 113173061
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 14952 bases
Position: chrOOHO01000008.1:4100052-4115003
Accession: 113173061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000033305	Rif1_N	PF12231.8	7.5e-81	1	1
ENSATEP00000033339	Rif1_N	PF12231.8	1.7e-78	1	1
ENSATEP00000033404	Rif1_N	PF12231.8	6.5e-72	1	1
ENSATEP00000033352	Rif1_N	PF12231.8	2e-71	1	1
ENSATEP00000033442	Rif1_N	PF12231.8	8.2e-43	1	1
ENSATEP00000033421	Rif1_N	PF12231.8	3.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000033838	-	7002	-	ENSATEP00000033352	2333 (aa)	-	-
ENSATET00000033789	-	7182	-	ENSATEP00000033305	2393 (aa)	-	-
ENSATET00000033928	-	8064	XM_026376328	ENSATEP00000033442	2261 (aa)	XP_026232113	-
ENSATET00000033823	-	7083	-	ENSATEP00000033339	2360 (aa)	-	-
ENSATET00000033890	-	6576	-	ENSATEP00000033404	2191 (aa)	-	-
ENSATET00000033907	-	8245	-	ENSATEP00000033421	2242 (aa)	-	-

Gene Model

Click here to download ENSATEG00000022887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000022887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000022887	rif1	68	48.196	ENSG00000080345	RIF1	97	53.455	Homo_sapiens
ENSATEG00000022887	rif1	99	66.261	ENSAPOG00000011073	rif1	99	69.681	Acanthochromis_polyacanthus
ENSATEG00000022887	rif1	65	48.794	ENSAMEG00000008461	RIF1	64	48.794	Ailuropoda_melanoleuca
ENSATEG00000022887	rif1	93	77.927	ENSACIG00000017765	rif1	99	74.493	Amphilophus_citrinellus
ENSATEG00000022887	rif1	99	70.000	ENSAOCG00000017231	rif1	96	70.000	Amphiprion_ocellaris
ENSATEG00000022887	rif1	97	76.857	ENSAPEG00000013228	rif1	99	75.031	Amphiprion_percula
ENSATEG00000022887	rif1	70	48.270	ENSAPLG00000007092	RIF1	81	48.374	Anas_platyrhynchos
ENSATEG00000022887	rif1	64	47.865	ENSACAG00000003714	RIF1	68	46.754	Anolis_carolinensis
ENSATEG00000022887	rif1	68	48.387	ENSANAG00000024840	RIF1	65	49.427	Aotus_nancymaae
ENSATEG00000022887	rif1	99	53.790	ENSAMXG00000010910	rif1	75	54.068	Astyanax_mexicanus
ENSATEG00000022887	rif1	60	48.384	ENSBTAG00000021020	RIF1	63	48.027	Bos_taurus
ENSATEG00000022887	rif1	68	48.657	ENSCJAG00000003138	RIF1	65	48.809	Callithrix_jacchus
ENSATEG00000022887	rif1	71	47.908	ENSCAFG00000005670	RIF1	67	48.060	Canis_familiaris
ENSATEG00000022887	rif1	71	47.908	ENSCAFG00020016401	RIF1	69	47.908	Canis_lupus_dingo
ENSATEG00000022887	rif1	67	46.652	ENSCHIG00000020327	RIF1	65	48.885	Capra_hircus
ENSATEG00000022887	rif1	68	45.699	ENSTSYG00000008861	RIF1	64	47.399	Carlito_syrichta
ENSATEG00000022887	rif1	62	40.730	ENSCAPG00000008957	RIF1	71	42.183	Cavia_aperea
ENSATEG00000022887	rif1	54	44.762	ENSCPOG00000037898	RIF1	52	45.967	Cavia_porcellus
ENSATEG00000022887	rif1	65	46.518	ENSCCAG00000024760	RIF1	65	47.045	Cebus_capucinus
ENSATEG00000022887	rif1	68	48.289	ENSCATG00000033353	RIF1	65	48.543	Cercocebus_atys
ENSATEG00000022887	rif1	67	47.541	ENSCLAG00000001517	RIF1	67	47.541	Chinchilla_lanigera
ENSATEG00000022887	rif1	68	48.313	ENSCSAG00000016089	RIF1	65	48.313	Chlorocebus_sabaeus
ENSATEG00000022887	rif1	61	45.575	ENSCHOG00000007187	RIF1	59	45.575	Choloepus_hoffmanni
ENSATEG00000022887	rif1	68	52.491	ENSCPBG00000025885	RIF1	88	45.501	Chrysemys_picta_bellii
ENSATEG00000022887	rif1	65	51.327	ENSCANG00000028962	RIF1	64	51.327	Colobus_angolensis_palliatus
ENSATEG00000022887	rif1	69	45.641	ENSCGRG00001024589	Rif1	67	46.702	Cricetulus_griseus_chok1gshd
ENSATEG00000022887	rif1	67	46.916	ENSCGRG00000010713	Rif1	67	48.009	Cricetulus_griseus_crigri
ENSATEG00000022887	rif1	97	60.210	ENSCSEG00000003945	rif1	99	59.706	Cynoglossus_semilaevis
ENSATEG00000022887	rif1	99	69.048	ENSCVAG00000022479	rif1	96	69.048	Cyprinodon_variegatus
ENSATEG00000022887	rif1	57	57.561	ENSDARG00000062650	rif1	75	55.413	Danio_rerio
ENSATEG00000022887	rif1	67	45.946	ENSDNOG00000011194	RIF1	63	46.667	Dasypus_novemcinctus
ENSATEG00000022887	rif1	63	58.407	ENSETEG00000012421	RIF1	62	58.407	Echinops_telfairi
ENSATEG00000022887	rif1	64	65.132	ENSEASG00005023434	RIF1	75	65.132	Equus_asinus_asinus
ENSATEG00000022887	rif1	61	57.466	ENSECAG00000012679	RIF1	61	57.466	Equus_caballus
ENSATEG00000022887	rif1	88	69.444	ENSELUG00000006826	rif1	72	69.444	Esox_lucius
ENSATEG00000022887	rif1	73	47.634	ENSFCAG00000029742	RIF1	66	49.020	Felis_catus
ENSATEG00000022887	rif1	62	52.081	ENSFALG00000013874	RIF1	66	52.465	Ficedula_albicollis
ENSATEG00000022887	rif1	66	47.850	ENSFDAG00000006538	RIF1	64	47.953	Fukomys_damarensis
ENSATEG00000022887	rif1	99	60.912	ENSFHEG00000013721	rif1	99	61.011	Fundulus_heteroclitus
ENSATEG00000022887	rif1	69	67.857	ENSGMOG00000003517	rif1	97	67.857	Gadus_morhua
ENSATEG00000022887	rif1	62	51.551	ENSGALG00000012484	RIF1	81	44.633	Gallus_gallus
ENSATEG00000022887	rif1	96	76.582	ENSGAFG00000017196	rif1	99	76.582	Gambusia_affinis
ENSATEG00000022887	rif1	70	50.859	ENSGAGG00000012595	RIF1	85	43.916	Gopherus_agassizii
ENSATEG00000022887	rif1	57	58.224	ENSGGOG00000040178	RIF1	59	58.224	Gorilla_gorilla
ENSATEG00000022887	rif1	99	68.369	ENSHBUG00000007125	rif1	97	83.333	Haplochromis_burtoni
ENSATEG00000022887	rif1	62	47.767	ENSHGLG00100009807	RIF1	71	47.261	Heterocephalus_glaber_male
ENSATEG00000022887	rif1	99	65.556	ENSHCOG00000015943	rif1	92	65.752	Hippocampus_comes
ENSATEG00000022887	rif1	78	62.466	ENSIPUG00000021703	rif1	85	62.466	Ictalurus_punctatus
ENSATEG00000022887	rif1	66	50.842	ENSSTOG00000020712	RIF1	78	42.310	Ictidomys_tridecemlineatus
ENSATEG00000022887	rif1	53	47.006	ENSJJAG00000023000	Rif1	67	47.220	Jaculus_jaculus
ENSATEG00000022887	rif1	99	62.500	ENSKMAG00000002852	rif1	100	60.575	Kryptolebias_marmoratus
ENSATEG00000022887	rif1	99	70.558	ENSLBEG00000023196	rif1	95	72.831	Labrus_bergylta
ENSATEG00000022887	rif1	64	52.716	ENSLACG00000005425	RIF1	66	46.417	Latimeria_chalumnae
ENSATEG00000022887	rif1	99	44.383	ENSLOCG00000002657	rif1	82	59.770	Lepisosteus_oculatus
ENSATEG00000022887	rif1	56	48.162	ENSLAFG00000009796	RIF1	53	49.466	Loxodonta_africana
ENSATEG00000022887	rif1	68	48.289	ENSMFAG00000032233	RIF1	65	48.289	Macaca_fascicularis
ENSATEG00000022887	rif1	68	48.289	ENSMMUG00000008611	RIF1	65	48.289	Macaca_mulatta
ENSATEG00000022887	rif1	68	48.365	ENSMNEG00000031616	RIF1	65	48.365	Macaca_nemestrina
ENSATEG00000022887	rif1	68	48.289	ENSMLEG00000042945	RIF1	65	48.543	Mandrillus_leucophaeus
ENSATEG00000022887	rif1	87	72.085	ENSMAMG00000001745	rif1	90	67.164	Mastacembelus_armatus
ENSATEG00000022887	rif1	97	77.962	ENSMZEG00005020920	rif1	99	73.933	Maylandia_zebra
ENSATEG00000022887	rif1	66	50.725	ENSMGAG00000012732	RIF1	77	50.805	Meleagris_gallopavo
ENSATEG00000022887	rif1	52	62.259	ENSMAUG00000013158	Rif1	72	62.259	Mesocricetus_auratus
ENSATEG00000022887	rif1	74	47.266	ENSMICG00000046127	RIF1	82	43.373	Microcebus_murinus
ENSATEG00000022887	rif1	68	45.283	ENSMOCG00000009381	Rif1	79	41.456	Microtus_ochrogaster
ENSATEG00000022887	rif1	100	72.093	ENSMMOG00000006519	rif1	100	61.535	Mola_mola
ENSATEG00000022887	rif1	67	48.184	ENSMODG00000003703	RIF1	79	44.118	Monodelphis_domestica
ENSATEG00000022887	rif1	77	78.510	ENSMALG00000016759	rif1	99	67.008	Monopterus_albus
ENSATEG00000022887	rif1	56	47.018	MGP_CAROLIEiJ_G0023555	Rif1	53	48.331	Mus_caroli
ENSATEG00000022887	rif1	67	46.884	ENSMUSG00000036202	Rif1	72	44.208	Mus_musculus
ENSATEG00000022887	rif1	70	43.519	MGP_PahariEiJ_G0025006	Rif1	72	44.848	Mus_pahari
ENSATEG00000022887	rif1	67	47.340	MGP_SPRETEiJ_G0024476	Rif1	72	44.859	Mus_spretus
ENSATEG00000022887	rif1	69	47.754	ENSMPUG00000000371	RIF1	78	44.271	Mustela_putorius_furo
ENSATEG00000022887	rif1	57	45.838	ENSMLUG00000003376	RIF1	63	45.838	Myotis_lucifugus
ENSATEG00000022887	rif1	65	48.097	ENSNGAG00000009268	Rif1	54	48.480	Nannospalax_galili
ENSATEG00000022887	rif1	99	72.319	ENSNBRG00000014257	rif1	99	72.319	Neolamprologus_brichardi
ENSATEG00000022887	rif1	68	47.586	ENSNLEG00000010955	RIF1	65	47.713	Nomascus_leucogenys
ENSATEG00000022887	rif1	50	63.393	ENSMEUG00000007601	-	67	63.393	Notamacropus_eugenii
ENSATEG00000022887	rif1	68	45.031	ENSODEG00000003950	RIF1	67	45.254	Octodon_degus
ENSATEG00000022887	rif1	99	69.812	ENSONIG00000013657	rif1	100	69.193	Oreochromis_niloticus
ENSATEG00000022887	rif1	55	54.013	ENSOANG00000006078	-	55	54.013	Ornithorhynchus_anatinus
ENSATEG00000022887	rif1	74	47.498	ENSOCUG00000017435	RIF1	86	41.398	Oryctolagus_cuniculus
ENSATEG00000022887	rif1	99	64.444	ENSORLG00020001302	rif1	99	55.027	Oryzias_latipes_hni
ENSATEG00000022887	rif1	99	62.222	ENSORLG00015000009	rif1	84	65.515	Oryzias_latipes_hsok
ENSATEG00000022887	rif1	99	54.722	ENSOMEG00000021513	rif1	99	54.520	Oryzias_melastigma
ENSATEG00000022887	rif1	65	49.231	ENSOGAG00000006141	RIF1	72	45.690	Otolemur_garnettii
ENSATEG00000022887	rif1	66	47.550	ENSOARG00000008930	RIF1	65	47.652	Ovis_aries
ENSATEG00000022887	rif1	68	48.273	ENSPPAG00000023754	RIF1	65	48.273	Pan_paniscus
ENSATEG00000022887	rif1	69	47.476	ENSPPRG00000003618	RIF1	67	47.788	Panthera_pardus
ENSATEG00000022887	rif1	69	47.476	ENSPTIG00000020652	RIF1	67	47.788	Panthera_tigris_altaica
ENSATEG00000022887	rif1	68	48.273	ENSPTRG00000012534	RIF1	65	48.273	Pan_troglodytes
ENSATEG00000022887	rif1	68	48.441	ENSPANG00000008525	RIF1	65	48.696	Papio_anubis
ENSATEG00000022887	rif1	80	55.519	ENSPKIG00000004267	rif1	84	55.702	Paramormyrops_kingsleyae
ENSATEG00000022887	rif1	79	64.518	ENSPMGG00000016141	rif1	95	64.403	Periophthalmus_magnuspinnatus
ENSATEG00000022887	rif1	67	47.242	ENSPEMG00000000446	Rif1	77	44.536	Peromyscus_maniculatus_bairdii
ENSATEG00000022887	rif1	67	49.275	ENSPCIG00000009185	RIF1	77	49.383	Phascolarctos_cinereus
ENSATEG00000022887	rif1	99	73.171	ENSPFOG00000017804	rif1	96	73.171	Poecilia_formosa
ENSATEG00000022887	rif1	91	73.171	ENSPFOG00000000554	-	95	73.171	Poecilia_formosa
ENSATEG00000022887	rif1	96	71.307	ENSPLAG00000017945	rif1	91	70.762	Poecilia_latipinna
ENSATEG00000022887	rif1	88	73.171	ENSPMEG00000006897	-	95	73.171	Poecilia_mexicana
ENSATEG00000022887	rif1	97	73.726	ENSPREG00000018052	rif1	99	73.726	Poecilia_reticulata
ENSATEG00000022887	rif1	68	48.097	ENSPPYG00000012846	RIF1	65	48.273	Pongo_abelii
ENSATEG00000022887	rif1	73	47.267	ENSPCOG00000027888	RIF1	70	47.806	Propithecus_coquereli
ENSATEG00000022887	rif1	60	57.959	ENSPVAG00000014276	RIF1	59	57.959	Pteropus_vampyrus
ENSATEG00000022887	rif1	97	78.627	ENSPNYG00000012940	rif1	92	78.627	Pundamilia_nyererei
ENSATEG00000022887	rif1	92	55.281	ENSPNAG00000016685	rif1	83	55.281	Pygocentrus_nattereri
ENSATEG00000022887	rif1	67	46.440	ENSRNOG00000054901	Rif1	72	46.417	Rattus_norvegicus
ENSATEG00000022887	rif1	68	47.823	ENSRBIG00000003704	RIF1	65	47.823	Rhinopithecus_bieti
ENSATEG00000022887	rif1	68	48.213	ENSRROG00000028206	RIF1	65	48.313	Rhinopithecus_roxellana
ENSATEG00000022887	rif1	65	51.163	ENSSBOG00000029530	RIF1	64	52.326	Saimiri_boliviensis_boliviensis
ENSATEG00000022887	rif1	82	45.739	ENSSHAG00000018552	RIF1	85	46.023	Sarcophilus_harrisii
ENSATEG00000022887	rif1	79	66.279	ENSSFOG00015021539	rif1	84	66.279	Scleropages_formosus
ENSATEG00000022887	rif1	99	70.023	ENSSMAG00000011704	rif1	97	70.023	Scophthalmus_maximus
ENSATEG00000022887	rif1	99	78.659	ENSSDUG00000015632	rif1	63	79.384	Seriola_dumerili
ENSATEG00000022887	rif1	100	74.419	ENSSLDG00000019531	rif1	100	71.743	Seriola_lalandi_dorsalis
ENSATEG00000022887	rif1	62	56.190	ENSSPUG00000003062	RIF1	70	51.774	Sphenodon_punctatus
ENSATEG00000022887	rif1	64	78.296	ENSSPAG00000018359	rif1	94	78.296	Stegastes_partitus
ENSATEG00000022887	rif1	66	48.418	ENSSSCG00000016395	RIF1	64	48.339	Sus_scrofa
ENSATEG00000022887	rif1	99	60.369	ENSTRUG00000015808	rif1	99	60.695	Takifugu_rubripes
ENSATEG00000022887	rif1	80	63.453	ENSTNIG00000011538	rif1	99	51.836	Tetraodon_nigroviridis
ENSATEG00000022887	rif1	60	52.953	ENSTBEG00000016082	RIF1	57	52.953	Tupaia_belangeri
ENSATEG00000022887	rif1	65	49.686	ENSTTRG00000011190	RIF1	64	49.686	Tursiops_truncatus
ENSATEG00000022887	rif1	57	46.918	ENSUAMG00000026385	RIF1	62	46.918	Ursus_americanus
ENSATEG00000022887	rif1	68	48.065	ENSUMAG00000000337	RIF1	65	48.065	Ursus_maritimus
ENSATEG00000022887	rif1	68	47.304	ENSVPAG00000002162	RIF1	65	47.072	Vicugna_pacos
ENSATEG00000022887	rif1	71	48.066	ENSVVUG00000011293	RIF1	70	48.066	Vulpes_vulpes
ENSATEG00000022887	rif1	79	48.451	ENSXETG00000004530	rif1	82	48.451	Xenopus_tropicalis
ENSATEG00000022887	rif1	97	60.606	ENSXMAG00000000506	rif1	99	60.606	Xiphophorus_maculatus