EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000023291 (Gene tree)
Gene ID: 113155850
Gene Symbol: trub1
Alias: zgc:195155
Full Name: TruB pseudouridine (psi) synthase family member 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 7522 bases
Position: chrOOHO01000022.1:988515-996036
Accession: ZDB-GENE-080723-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000033853	TruB_N	PF01509.18	6e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000034344	-	840	-	ENSATEP00000033853	279 (aa)	-	-

Gene Model

Click here to download ENSATEG00000023291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000023291's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000023291	trub1	70	31.156	ENSATEG00000011371	trub2	62	31.156

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000023291	trub1	86	68.880	ENSG00000165832	TRUB1	69	68.880	Homo_sapiens
ENSATEG00000023291	trub1	86	90.041	ENSAPOG00000020565	trub1	92	87.352	Acanthochromis_polyacanthus
ENSATEG00000023291	trub1	86	68.724	ENSAMEG00000014931	TRUB1	69	68.724	Ailuropoda_melanoleuca
ENSATEG00000023291	trub1	88	82.857	ENSACIG00000003060	trub1	82	82.857	Amphilophus_citrinellus
ENSATEG00000023291	trub1	86	90.456	ENSAOCG00000017188	trub1	89	89.796	Amphiprion_ocellaris
ENSATEG00000023291	trub1	88	89.388	ENSAPEG00000015209	trub1	89	89.388	Amphiprion_percula
ENSATEG00000023291	trub1	88	67.742	ENSAPLG00000006808	TRUB1	89	67.742	Anas_platyrhynchos
ENSATEG00000023291	trub1	87	67.769	ENSACAG00000009282	TRUB1	87	67.769	Anolis_carolinensis
ENSATEG00000023291	trub1	86	68.880	ENSANAG00000022870	TRUB1	69	68.880	Aotus_nancymaae
ENSATEG00000023291	trub1	88	88.980	ENSACLG00000000823	trub1	88	88.980	Astatotilapia_calliptera
ENSATEG00000023291	trub1	87	78.279	ENSAMXG00000015845	trub1	82	78.279	Astyanax_mexicanus
ENSATEG00000023291	trub1	86	69.710	ENSBTAG00000012955	TRUB1	68	69.710	Bos_taurus
ENSATEG00000023291	trub1	86	68.880	ENSCJAG00000047815	TRUB1	69	68.880	Callithrix_jacchus
ENSATEG00000023291	trub1	86	69.295	ENSCAFG00000011688	TRUB1	69	69.295	Canis_familiaris
ENSATEG00000023291	trub1	86	69.295	ENSCAFG00020013237	TRUB1	69	69.295	Canis_lupus_dingo
ENSATEG00000023291	trub1	86	69.295	ENSCHIG00000020884	TRUB1	72	69.295	Capra_hircus
ENSATEG00000023291	trub1	86	67.635	ENSTSYG00000000446	TRUB1	69	67.635	Carlito_syrichta
ENSATEG00000023291	trub1	75	62.019	ENSCAPG00000017088	TRUB1	80	62.019	Cavia_aperea
ENSATEG00000023291	trub1	65	67.582	ENSCPOG00000040236	-	75	67.582	Cavia_porcellus
ENSATEG00000023291	trub1	66	67.027	ENSCPOG00000030129	-	72	67.027	Cavia_porcellus
ENSATEG00000023291	trub1	86	68.880	ENSCCAG00000028842	TRUB1	69	68.880	Cebus_capucinus
ENSATEG00000023291	trub1	86	68.880	ENSCATG00000033431	TRUB1	69	68.880	Cercocebus_atys
ENSATEG00000023291	trub1	65	66.484	ENSCLAG00000008664	TRUB1	75	66.484	Chinchilla_lanigera
ENSATEG00000023291	trub1	86	68.880	ENSCSAG00000004891	TRUB1	69	68.880	Chlorocebus_sabaeus
ENSATEG00000023291	trub1	86	61.411	ENSCHOG00000011931	TRUB1	69	61.411	Choloepus_hoffmanni
ENSATEG00000023291	trub1	89	71.084	ENSCPBG00000003051	TRUB1	86	71.084	Chrysemys_picta_bellii
ENSATEG00000023291	trub1	86	68.880	ENSCANG00000029445	TRUB1	69	68.880	Colobus_angolensis_palliatus
ENSATEG00000023291	trub1	84	60.000	ENSCGRG00001010322	-	65	59.917	Cricetulus_griseus_chok1gshd
ENSATEG00000023291	trub1	75	68.421	ENSCGRG00001016772	-	70	68.246	Cricetulus_griseus_chok1gshd
ENSATEG00000023291	trub1	84	67.660	ENSCGRG00000010806	Trub1	74	67.769	Cricetulus_griseus_crigri
ENSATEG00000023291	trub1	88	81.224	ENSCSEG00000011261	trub1	79	81.224	Cynoglossus_semilaevis
ENSATEG00000023291	trub1	88	84.082	ENSCVAG00000008791	trub1	75	84.082	Cyprinodon_variegatus
ENSATEG00000023291	trub1	94	69.675	ENSDARG00000053805	trub1	95	69.675	Danio_rerio
ENSATEG00000023291	trub1	90	66.008	ENSDNOG00000001069	TRUB1	72	66.008	Dasypus_novemcinctus
ENSATEG00000023291	trub1	84	68.085	ENSDORG00000010431	Trub1	70	68.182	Dipodomys_ordii
ENSATEG00000023291	trub1	65	66.176	ENSETEG00000009183	TRUB1	51	66.176	Echinops_telfairi
ENSATEG00000023291	trub1	86	68.465	ENSEASG00005014739	TRUB1	69	68.465	Equus_asinus_asinus
ENSATEG00000023291	trub1	86	68.465	ENSECAG00000007177	TRUB1	69	68.465	Equus_caballus
ENSATEG00000023291	trub1	86	61.411	ENSEEUG00000013993	TRUB1	67	61.411	Erinaceus_europaeus
ENSATEG00000023291	trub1	87	81.148	ENSELUG00000000502	trub1	85	81.148	Esox_lucius
ENSATEG00000023291	trub1	86	69.295	ENSFCAG00000031927	TRUB1	69	69.295	Felis_catus
ENSATEG00000023291	trub1	78	68.493	ENSFALG00000002232	TRUB1	84	68.493	Ficedula_albicollis
ENSATEG00000023291	trub1	65	68.132	ENSFDAG00000008140	TRUB1	75	68.132	Fukomys_damarensis
ENSATEG00000023291	trub1	88	86.122	ENSFHEG00000004016	trub1	84	86.122	Fundulus_heteroclitus
ENSATEG00000023291	trub1	86	67.220	ENSGALG00000009091	TRUB1	85	67.220	Gallus_gallus
ENSATEG00000023291	trub1	88	83.740	ENSGAFG00000009193	trub1	86	83.740	Gambusia_affinis
ENSATEG00000023291	trub1	68	90.052	ENSGACG00000015387	trub1	94	90.052	Gasterosteus_aculeatus
ENSATEG00000023291	trub1	87	72.314	ENSGAGG00000009758	TRUB1	69	72.199	Gopherus_agassizii
ENSATEG00000023291	trub1	86	68.880	ENSGGOG00000004583	TRUB1	69	68.880	Gorilla_gorilla
ENSATEG00000023291	trub1	88	88.571	ENSHBUG00000016787	trub1	88	88.571	Haplochromis_burtoni
ENSATEG00000023291	trub1	86	67.635	ENSHGLG00000015314	TRUB1	69	67.635	Heterocephalus_glaber_female
ENSATEG00000023291	trub1	65	67.582	ENSHGLG00100009183	TRUB1	77	67.582	Heterocephalus_glaber_male
ENSATEG00000023291	trub1	88	86.939	ENSHCOG00000017877	trub1	89	86.939	Hippocampus_comes
ENSATEG00000023291	trub1	87	77.459	ENSIPUG00000017559	trub1	86	77.459	Ictalurus_punctatus
ENSATEG00000023291	trub1	86	68.619	ENSSTOG00000003641	TRUB1	72	68.619	Ictidomys_tridecemlineatus
ENSATEG00000023291	trub1	88	66.935	ENSJJAG00000011800	Trub1	71	68.050	Jaculus_jaculus
ENSATEG00000023291	trub1	88	83.673	ENSKMAG00000006232	trub1	88	83.673	Kryptolebias_marmoratus
ENSATEG00000023291	trub1	88	87.755	ENSLBEG00000026722	trub1	86	87.755	Labrus_bergylta
ENSATEG00000023291	trub1	88	75.510	ENSLACG00000014885	TRUB1	82	75.510	Latimeria_chalumnae
ENSATEG00000023291	trub1	87	78.512	ENSLOCG00000012979	trub1	82	78.512	Lepisosteus_oculatus
ENSATEG00000023291	trub1	86	69.295	ENSLAFG00000015452	TRUB1	69	69.295	Loxodonta_africana
ENSATEG00000023291	trub1	86	68.880	ENSMFAG00000031767	TRUB1	69	68.880	Macaca_fascicularis
ENSATEG00000023291	trub1	86	68.880	ENSMMUG00000001902	TRUB1	69	68.880	Macaca_mulatta
ENSATEG00000023291	trub1	86	63.900	ENSMNEG00000044646	TRUB1	68	63.900	Macaca_nemestrina
ENSATEG00000023291	trub1	86	68.880	ENSMLEG00000042655	TRUB1	69	68.880	Mandrillus_leucophaeus
ENSATEG00000023291	trub1	88	88.980	ENSMZEG00005024095	trub1	88	88.980	Maylandia_zebra
ENSATEG00000023291	trub1	86	68.050	ENSMGAG00000011135	TRUB1	83	68.050	Meleagris_gallopavo
ENSATEG00000023291	trub1	84	65.957	ENSMAUG00000011101	Trub1	71	66.116	Mesocricetus_auratus
ENSATEG00000023291	trub1	86	68.465	ENSMICG00000016324	TRUB1	69	68.465	Microcebus_murinus
ENSATEG00000023291	trub1	84	68.511	ENSMOCG00000017759	Trub1	73	68.595	Microtus_ochrogaster
ENSATEG00000023291	trub1	86	69.710	ENSMODG00000009676	TRUB1	69	68.110	Monodelphis_domestica
ENSATEG00000023291	trub1	85	68.487	MGP_CAROLIEiJ_G0023100	Trub1	76	68.449	Mus_caroli
ENSATEG00000023291	trub1	85	67.647	ENSMUSG00000025086	Trub1	76	67.380	Mus_musculus
ENSATEG00000023291	trub1	87	67.769	MGP_PahariEiJ_G0014588	Trub1	72	67.769	Mus_pahari
ENSATEG00000023291	trub1	85	67.647	MGP_SPRETEiJ_G0024021	Trub1	76	67.380	Mus_spretus
ENSATEG00000023291	trub1	86	69.295	ENSMPUG00000003556	TRUB1	69	69.295	Mustela_putorius_furo
ENSATEG00000023291	trub1	86	68.465	ENSMLUG00000017686	TRUB1	71	68.465	Myotis_lucifugus
ENSATEG00000023291	trub1	86	68.465	ENSNGAG00000018682	Trub1	69	68.465	Nannospalax_galili
ENSATEG00000023291	trub1	88	88.980	ENSNBRG00000023393	trub1	88	88.980	Neolamprologus_brichardi
ENSATEG00000023291	trub1	86	68.880	ENSNLEG00000016345	TRUB1	69	68.880	Nomascus_leucogenys
ENSATEG00000023291	trub1	72	70.647	ENSMEUG00000006603	TRUB1	75	70.792	Notamacropus_eugenii
ENSATEG00000023291	trub1	87	68.182	ENSOPRG00000009371	TRUB1	70	68.182	Ochotona_princeps
ENSATEG00000023291	trub1	91	63.910	ENSODEG00000010854	TRUB1	76	63.910	Octodon_degus
ENSATEG00000023291	trub1	88	88.980	ENSONIG00000007249	trub1	89	88.980	Oreochromis_niloticus
ENSATEG00000023291	trub1	87	70.248	ENSOANG00000001556	TRUB1	80	70.248	Ornithorhynchus_anatinus
ENSATEG00000023291	trub1	86	68.050	ENSOCUG00000009456	TRUB1	70	68.050	Oryctolagus_cuniculus
ENSATEG00000023291	trub1	87	86.831	ENSORLG00000029719	trub1	88	86.531	Oryzias_latipes
ENSATEG00000023291	trub1	87	86.831	ENSORLG00020016767	trub1	87	86.531	Oryzias_latipes_hni
ENSATEG00000023291	trub1	87	86.008	ENSORLG00015014728	trub1	88	85.714	Oryzias_latipes_hsok
ENSATEG00000023291	trub1	94	83.525	ENSOMEG00000014556	trub1	91	83.525	Oryzias_melastigma
ENSATEG00000023291	trub1	86	68.880	ENSOGAG00000015895	TRUB1	69	68.880	Otolemur_garnettii
ENSATEG00000023291	trub1	86	67.742	ENSOARG00000015591	TRUB1	70	67.742	Ovis_aries
ENSATEG00000023291	trub1	86	68.880	ENSPPAG00000043645	TRUB1	69	68.880	Pan_paniscus
ENSATEG00000023291	trub1	86	68.880	ENSPPRG00000007096	TRUB1	69	68.880	Panthera_pardus
ENSATEG00000023291	trub1	86	68.880	ENSPTIG00000006378	TRUB1	69	68.880	Panthera_tigris_altaica
ENSATEG00000023291	trub1	86	68.880	ENSPTRG00000002964	TRUB1	69	68.880	Pan_troglodytes
ENSATEG00000023291	trub1	86	68.880	ENSPANG00000020712	TRUB1	69	68.880	Papio_anubis
ENSATEG00000023291	trub1	70	72.959	ENSPKIG00000003852	trub1	83	72.959	Paramormyrops_kingsleyae
ENSATEG00000023291	trub1	88	71.837	ENSPSIG00000012877	TRUB1	84	71.837	Pelodiscus_sinensis
ENSATEG00000023291	trub1	88	79.184	ENSPMGG00000000075	trub1	88	79.184	Periophthalmus_magnuspinnatus
ENSATEG00000023291	trub1	87	68.595	ENSPEMG00000011156	Trub1	71	68.595	Peromyscus_maniculatus_bairdii
ENSATEG00000023291	trub1	90	68.526	ENSPCIG00000009729	TRUB1	68	68.651	Phascolarctos_cinereus
ENSATEG00000023291	trub1	88	84.959	ENSPFOG00000009950	trub1	90	84.959	Poecilia_formosa
ENSATEG00000023291	trub1	88	84.553	ENSPLAG00000013855	trub1	86	84.553	Poecilia_latipinna
ENSATEG00000023291	trub1	88	84.959	ENSPMEG00000009064	trub1	89	84.959	Poecilia_mexicana
ENSATEG00000023291	trub1	88	84.553	ENSPREG00000003343	trub1	89	84.553	Poecilia_reticulata
ENSATEG00000023291	trub1	86	68.465	ENSPPYG00000002676	TRUB1	69	68.465	Pongo_abelii
ENSATEG00000023291	trub1	86	63.071	ENSPCAG00000008427	TRUB1	68	63.071	Procavia_capensis
ENSATEG00000023291	trub1	86	63.485	ENSPCOG00000024360	TRUB1	67	63.485	Propithecus_coquereli
ENSATEG00000023291	trub1	72	69.652	ENSPVAG00000007575	TRUB1	76	69.652	Pteropus_vampyrus
ENSATEG00000023291	trub1	88	88.980	ENSPNYG00000018614	trub1	88	88.980	Pundamilia_nyererei
ENSATEG00000023291	trub1	87	70.492	ENSPNAG00000006881	trub1	78	70.492	Pygocentrus_nattereri
ENSATEG00000023291	trub1	87	66.942	ENSRNOG00000017321	Trub1	71	66.942	Rattus_norvegicus
ENSATEG00000023291	trub1	86	60.082	ENSRBIG00000033423	TRUB1	66	60.082	Rhinopithecus_bieti
ENSATEG00000023291	trub1	86	68.880	ENSRROG00000033902	TRUB1	69	68.880	Rhinopithecus_roxellana
ENSATEG00000023291	trub1	86	68.880	ENSSBOG00000024237	TRUB1	69	68.880	Saimiri_boliviensis_boliviensis
ENSATEG00000023291	trub1	75	69.811	ENSSHAG00000009346	TRUB1	71	69.811	Sarcophilus_harrisii
ENSATEG00000023291	trub1	92	77.344	ENSSFOG00015022124	trub1	87	77.344	Scleropages_formosus
ENSATEG00000023291	trub1	88	88.571	ENSSMAG00000001020	trub1	87	88.571	Scophthalmus_maximus
ENSATEG00000023291	trub1	85	91.525	ENSSDUG00000016414	trub1	88	91.020	Seriola_dumerili
ENSATEG00000023291	trub1	85	91.949	ENSSLDG00000015486	trub1	88	91.429	Seriola_lalandi_dorsalis
ENSATEG00000023291	trub1	88	70.445	ENSSPUG00000001642	TRUB1	85	70.445	Sphenodon_punctatus
ENSATEG00000023291	trub1	88	88.980	ENSSPAG00000001217	trub1	88	88.980	Stegastes_partitus
ENSATEG00000023291	trub1	88	67.742	ENSSSCG00000010653	TRUB1	70	68.880	Sus_scrofa
ENSATEG00000023291	trub1	88	68.952	ENSTGUG00000010971	TRUB1	88	68.952	Taeniopygia_guttata
ENSATEG00000023291	trub1	77	57.604	ENSTBEG00000002880	TRUB1	85	57.604	Tupaia_belangeri
ENSATEG00000023291	trub1	72	69.154	ENSTTRG00000005767	TRUB1	77	69.154	Tursiops_truncatus
ENSATEG00000023291	trub1	86	69.295	ENSUAMG00000024876	TRUB1	69	69.295	Ursus_americanus
ENSATEG00000023291	trub1	86	69.295	ENSUMAG00000002411	TRUB1	72	69.295	Ursus_maritimus
ENSATEG00000023291	trub1	86	69.295	ENSVPAG00000005507	TRUB1	69	69.295	Vicugna_pacos
ENSATEG00000023291	trub1	86	69.295	ENSVVUG00000010085	TRUB1	58	69.295	Vulpes_vulpes
ENSATEG00000023291	trub1	86	70.370	ENSXETG00000023828	trub1	87	70.370	Xenopus_tropicalis
ENSATEG00000023291	trub1	88	84.082	ENSXCOG00000017847	trub1	87	84.082	Xiphophorus_couchianus
ENSATEG00000023291	trub1	88	84.959	ENSXMAG00000014701	trub1	89	84.959	Xiphophorus_maculatus