EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000023662 (Gene tree)
Gene ID: 113170481
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-13
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 5245 bases
Position: chrOOHO01000006.1:30568121-30573365
Accession: 113170481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000034450	MMR_HSR1	PF01926.23	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000034948	-	2417	XM_026372592	ENSATEP00000034450	200 (aa)	XP_026228377	UPI000E46093B

Gene Model

Click here to download ENSATEG00000023662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000023662's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000023662	-	88	35.028	ENSATEG00000020913	rab23	90	35.450
ENSATEG00000023662	-	80	45.000	ENSATEG00000014851	rab25a	76	45.000
ENSATEG00000023662	-	80	48.428	ENSATEG00000006156	rab11al	74	48.428
ENSATEG00000023662	-	77	36.364	ENSATEG00000020171	rheb	83	36.364
ENSATEG00000023662	-	80	49.057	ENSATEG00000023730	rab11ba	73	49.057
ENSATEG00000023662	-	98	53.500	ENSATEG00000015844	-	98	53.500
ENSATEG00000023662	-	79	44.304	ENSATEG00000012459	-	76	44.304
ENSATEG00000023662	-	63	32.031	ENSATEG00000003808	-	71	32.031
ENSATEG00000023662	-	75	35.762	ENSATEG00000012108	si:ch73-116o1.2	78	36.810
ENSATEG00000023662	-	82	40.462	ENSATEG00000004488	rab9b	80	40.462
ENSATEG00000023662	-	97	52.525	ENSATEG00000002479	rab1ba	98	52.525
ENSATEG00000023662	-	82	31.548	ENSATEG00000011117	rab20	63	31.548
ENSATEG00000023662	-	83	38.012	ENSATEG00000024739	RAB29	83	38.012
ENSATEG00000023662	-	80	49.686	ENSATEG00000017696	rab11bb	73	49.686
ENSATEG00000023662	-	79	43.671	ENSATEG00000015992	rab41	75	43.671
ENSATEG00000023662	-	85	48.521	ENSATEG00000019238	si:dkey-16l2.16	87	46.154
ENSATEG00000023662	-	86	51.462	ENSATEG00000013281	rab35b	100	46.078
ENSATEG00000023662	-	87	38.764	ENSATEG00000017237	RAB7A	86	38.764
ENSATEG00000023662	-	98	53.500	ENSATEG00000008052	rab1ab	98	53.500
ENSATEG00000023662	-	84	44.828	ENSATEG00000007761	zgc:101559	74	44.828
ENSATEG00000023662	-	74	41.060	ENSATEG00000006851	rab34b	61	41.060
ENSATEG00000023662	-	85	50.588	ENSATEG00000012781	-	77	50.588
ENSATEG00000023662	-	83	42.604	ENSATEG00000010784	si:dkey-34d22.5	66	42.604
ENSATEG00000023662	-	79	40.625	ENSATEG00000023047	rab34a	60	40.625
ENSATEG00000023662	-	84	47.024	ENSATEG00000002553	rab2a	84	47.024
ENSATEG00000023662	-	98	31.818	ENSATEG00000004893	si:cabz01085950.1	95	31.818
ENSATEG00000023662	-	80	32.716	ENSATEG00000001111	rabl2	71	32.716
ENSATEG00000023662	-	90	33.702	ENSATEG00000021300	kras	98	34.197
ENSATEG00000023662	-	86	50.581	ENSATEG00000019683	rab12	71	50.581
ENSATEG00000023662	-	86	44.186	ENSATEG00000006124	rab25b	83	44.186
ENSATEG00000023662	-	81	40.373	ENSATEG00000025079	rab22a	83	40.373
ENSATEG00000023662	-	95	41.538	ENSATEG00000002952	rab18b	93	41.538
ENSATEG00000023662	-	75	35.333	ENSATEG00000007298	rras2	80	35.185
ENSATEG00000023662	-	84	31.361	ENSATEG00000017315	-	91	31.361
ENSATEG00000023662	-	81	30.120	ENSATEG00000003847	-	89	30.120
ENSATEG00000023662	-	74	45.098	ENSATEG00000022993	-	64	45.098
ENSATEG00000023662	-	80	32.749	ENSATEG00000014272	rasl11a	66	32.749
ENSATEG00000023662	-	90	33.333	ENSATEG00000020001	hrasb	98	33.846
ENSATEG00000023662	-	79	43.671	ENSATEG00000011879	rab6bb	75	43.671
ENSATEG00000023662	-	84	50.299	ENSATEG00000010475	rab30	82	50.299
ENSATEG00000023662	-	85	44.767	ENSATEG00000013086	-	81	44.767
ENSATEG00000023662	-	80	49.686	ENSATEG00000023725	-	73	49.686
ENSATEG00000023662	-	83	41.916	ENSATEG00000009052	rab42a	77	41.916
ENSATEG00000023662	-	88	54.286	ENSATEG00000019023	rab15	82	54.286
ENSATEG00000023662	-	87	38.764	ENSATEG00000002860	RAB7A	86	38.764
ENSATEG00000023662	-	83	43.636	ENSATEG00000012604	-	77	43.636
ENSATEG00000023662	-	90	43.243	ENSATEG00000021911	rab18a	88	43.243
ENSATEG00000023662	-	85	39.535	ENSATEG00000016312	rab33ba	72	39.535
ENSATEG00000023662	-	83	47.590	ENSATEG00000022531	rab11a	77	47.590
ENSATEG00000023662	-	91	37.696	ENSATEG00000003390	rab36	73	37.696
ENSATEG00000023662	-	100	52.475	ENSATEG00000003430	zgc:171927	94	52.475
ENSATEG00000023662	-	83	43.030	ENSATEG00000001937	rab5c	89	40.000
ENSATEG00000023662	-	94	42.211	ENSATEG00000017702	rab33a	89	42.211
ENSATEG00000023662	-	85	44.767	ENSATEG00000009865	RAB39B	81	44.767
ENSATEG00000023662	-	84	38.728	ENSATEG00000013396	rab9a	85	38.728
ENSATEG00000023662	-	95	40.625	ENSATEG00000014748	rab5aa	89	40.625
ENSATEG00000023662	-	95	36.224	ENSATEG00000018261	RAB9A	90	36.224
ENSATEG00000023662	-	82	39.881	ENSATEG00000014958	si:dkey-13a21.4	82	39.881
ENSATEG00000023662	-	83	43.030	ENSATEG00000018600	rab14	77	43.030
ENSATEG00000023662	-	90	33.880	ENSATEG00000008400	rras	96	34.359

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000023662	-	100	94.000	ENSAPOG00000001040	-	100	94.000	Acanthochromis_polyacanthus
ENSATEG00000023662	-	100	66.169	ENSACIG00000003157	-	100	66.169	Amphilophus_citrinellus
ENSATEG00000023662	-	100	94.000	ENSAOCG00000015908	-	100	94.000	Amphiprion_ocellaris
ENSATEG00000023662	-	100	94.000	ENSAPEG00000004121	-	100	94.000	Amphiprion_percula
ENSATEG00000023662	-	100	91.500	ENSACLG00000019643	-	100	91.500	Astatotilapia_calliptera
ENSATEG00000023662	-	100	91.000	ENSCVAG00000022649	-	100	91.000	Cyprinodon_variegatus
ENSATEG00000023662	-	86	72.093	ENSDARG00000103934	megf8	99	72.093	Danio_rerio
ENSATEG00000023662	-	100	90.000	ENSGAFG00000014787	-	100	90.000	Gambusia_affinis
ENSATEG00000023662	-	100	91.500	ENSHBUG00000003728	-	100	91.500	Haplochromis_burtoni
ENSATEG00000023662	-	100	91.500	ENSMZEG00005015817	-	100	91.500	Maylandia_zebra
ENSATEG00000023662	-	100	92.500	ENSMMOG00000003924	-	100	92.500	Mola_mola
ENSATEG00000023662	-	100	91.000	ENSMALG00000020807	-	100	91.000	Monopterus_albus
ENSATEG00000023662	-	54	89.815	ENSOPRG00000014416	-	100	89.815	Ochotona_princeps
ENSATEG00000023662	-	100	90.000	ENSORLG00000025395	-	100	90.000	Oryzias_latipes
ENSATEG00000023662	-	100	90.000	ENSORLG00020009535	-	100	90.000	Oryzias_latipes_hni
ENSATEG00000023662	-	100	90.500	ENSORLG00015015518	-	100	90.500	Oryzias_latipes_hsok
ENSATEG00000023662	-	100	85.075	ENSPKIG00000014528	-	100	85.075	Paramormyrops_kingsleyae
ENSATEG00000023662	-	100	90.500	ENSPFOG00000014418	-	100	90.500	Poecilia_formosa
ENSATEG00000023662	-	100	90.500	ENSPLAG00000003181	-	100	90.500	Poecilia_latipinna
ENSATEG00000023662	-	100	90.500	ENSPMEG00000008020	-	100	90.500	Poecilia_mexicana
ENSATEG00000023662	-	100	90.500	ENSPMEG00000022988	-	100	90.500	Poecilia_mexicana
ENSATEG00000023662	-	100	90.500	ENSPNYG00000004681	-	100	90.500	Pundamilia_nyererei
ENSATEG00000023662	-	100	87.000	ENSSFOG00015021754	rab13	100	87.000	Scleropages_formosus
ENSATEG00000023662	-	100	92.500	ENSSMAG00000016376	-	100	92.500	Scophthalmus_maximus
ENSATEG00000023662	-	100	66.667	ENSSMAG00000002569	-	100	66.667	Scophthalmus_maximus
ENSATEG00000023662	-	100	94.000	ENSSDUG00000006307	-	100	94.000	Seriola_dumerili
ENSATEG00000023662	-	100	94.000	ENSSLDG00000015823	-	100	94.000	Seriola_lalandi_dorsalis
ENSATEG00000023662	-	100	94.500	ENSSPAG00000022440	-	100	94.500	Stegastes_partitus
ENSATEG00000023662	-	100	90.500	ENSTNIG00000018319	-	100	90.500	Tetraodon_nigroviridis
ENSATEG00000023662	-	100	90.500	ENSXMAG00000016094	-	100	90.500	Xiphophorus_maculatus