EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000023809 (Gene tree)
Gene ID: 113156865
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 9733 bases
Position: chrOOHO01000022.1:1832623-1842355
Accession: 113156865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000034645	KH_1	PF00013.29	3.3e-17	1	1
ENSATEP00000034649	KH_1	PF00013.29	3.9e-17	1	1
ENSATEP00000034645	TUDOR	PF00567.24	4.9e-26	1	1
ENSATEP00000034649	TUDOR	PF00567.24	5.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000035152	-	2594	XM_026352253	ENSATEP00000034649	585 (aa)	XP_026208038	UPI000E4568FA
ENSATET00000035148	-	2559	XM_026352254	ENSATEP00000034645	553 (aa)	XP_026208039	UPI000E4600FD

Gene Model

Click here to download ENSATEG00000023809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000023809's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000023809	tdrkh	100	82.712	ENSAPOG00000012653	tdrkh	100	82.437	Acanthochromis_polyacanthus
ENSATEG00000023809	tdrkh	97	76.679	ENSACIG00000010318	tdrkh	98	76.679	Amphilophus_citrinellus
ENSATEG00000023809	tdrkh	100	83.871	ENSAOCG00000020623	tdrkh	100	83.871	Amphiprion_ocellaris
ENSATEG00000023809	tdrkh	100	84.050	ENSAPEG00000018388	tdrkh	100	84.050	Amphiprion_percula
ENSATEG00000023809	tdrkh	100	75.451	ENSACLG00000003017	tdrkh	100	75.451	Astatotilapia_calliptera
ENSATEG00000023809	tdrkh	99	62.230	ENSAMXG00000011664	tdrkh	99	61.263	Astyanax_mexicanus
ENSATEG00000023809	tdrkh	100	68.214	ENSCSEG00000002894	tdrkh	100	68.021	Cynoglossus_semilaevis
ENSATEG00000023809	tdrkh	62	83.824	ENSCVAG00000020347	tdrkh	78	83.824	Cyprinodon_variegatus
ENSATEG00000023809	tdrkh	99	62.206	ENSDARG00000053474	tdrkh	99	62.051	Danio_rerio
ENSATEG00000023809	tdrkh	100	66.608	ENSELUG00000024537	tdrkh	100	66.057	Esox_lucius
ENSATEG00000023809	tdrkh	100	77.437	ENSFHEG00000003544	tdrkh	100	77.437	Fundulus_heteroclitus
ENSATEG00000023809	tdrkh	100	65.295	ENSGMOG00000009304	tdrkh	100	64.805	Gadus_morhua
ENSATEG00000023809	tdrkh	100	73.022	ENSGAFG00000010754	tdrkh	100	73.022	Gambusia_affinis
ENSATEG00000023809	tdrkh	100	74.112	ENSGACG00000015258	tdrkh	100	74.112	Gasterosteus_aculeatus
ENSATEG00000023809	tdrkh	100	75.271	ENSHBUG00000017609	tdrkh	100	75.271	Haplochromis_burtoni
ENSATEG00000023809	tdrkh	99	61.759	ENSIPUG00000009673	tdrkh	99	61.759	Ictalurus_punctatus
ENSATEG00000023809	tdrkh	100	73.571	ENSKMAG00000016638	tdrkh	94	74.377	Kryptolebias_marmoratus
ENSATEG00000023809	tdrkh	100	79.820	ENSLBEG00000027323	tdrkh	99	79.682	Labrus_bergylta
ENSATEG00000023809	tdrkh	99	51.865	ENSLOCG00000011381	tdrkh	99	51.865	Lepisosteus_oculatus
ENSATEG00000023809	tdrkh	100	82.491	ENSMAMG00000020343	tdrkh	100	82.491	Mastacembelus_armatus
ENSATEG00000023809	tdrkh	100	75.451	ENSMZEG00005006755	tdrkh	100	75.451	Maylandia_zebra
ENSATEG00000023809	tdrkh	97	75.923	ENSMMOG00000020663	tdrkh	95	75.923	Mola_mola
ENSATEG00000023809	tdrkh	100	79.317	ENSMALG00000015401	tdrkh	100	79.317	Monopterus_albus
ENSATEG00000023809	tdrkh	100	72.022	ENSNBRG00000023815	tdrkh	100	72.022	Neolamprologus_brichardi
ENSATEG00000023809	tdrkh	100	70.344	ENSORLG00000029204	tdrkh	99	70.344	Oryzias_latipes
ENSATEG00000023809	tdrkh	96	68.868	ENSORLG00020016168	tdrkh	99	68.868	Oryzias_latipes_hni
ENSATEG00000023809	tdrkh	100	66.727	ENSORLG00015014094	tdrkh	99	66.727	Oryzias_latipes_hsok
ENSATEG00000023809	tdrkh	100	71.971	ENSOMEG00000015063	tdrkh	93	71.634	Oryzias_melastigma
ENSATEG00000023809	tdrkh	100	57.857	ENSPKIG00000017597	tdrkh	100	57.857	Paramormyrops_kingsleyae
ENSATEG00000023809	tdrkh	100	68.505	ENSPMGG00000019362	tdrkh	100	68.505	Periophthalmus_magnuspinnatus
ENSATEG00000023809	tdrkh	100	72.662	ENSPFOG00000013032	tdrkh	100	71.769	Poecilia_formosa
ENSATEG00000023809	tdrkh	100	72.842	ENSPLAG00000004193	tdrkh	100	72.842	Poecilia_latipinna
ENSATEG00000023809	tdrkh	100	72.662	ENSPMEG00000016502	tdrkh	100	72.662	Poecilia_mexicana
ENSATEG00000023809	tdrkh	100	70.683	ENSPREG00000004213	tdrkh	100	69.898	Poecilia_reticulata
ENSATEG00000023809	tdrkh	97	75.000	ENSPNYG00000022818	tdrkh	97	75.000	Pundamilia_nyererei
ENSATEG00000023809	tdrkh	99	62.410	ENSPNAG00000008783	tdrkh	99	61.735	Pygocentrus_nattereri
ENSATEG00000023809	tdrkh	100	56.762	ENSSFOG00015001048	tdrkh	100	57.117	Scleropages_formosus
ENSATEG00000023809	tdrkh	100	83.900	ENSSMAG00000001532	tdrkh	100	84.258	Scophthalmus_maximus
ENSATEG00000023809	tdrkh	100	83.186	ENSSDUG00000013393	tdrkh	100	83.511	Seriola_dumerili
ENSATEG00000023809	tdrkh	100	83.363	ENSSLDG00000017418	tdrkh	100	83.333	Seriola_lalandi_dorsalis
ENSATEG00000023809	tdrkh	100	84.407	ENSSPAG00000006435	tdrkh	100	84.407	Stegastes_partitus
ENSATEG00000023809	tdrkh	97	71.828	ENSTRUG00000006644	tdrkh	97	71.828	Takifugu_rubripes
ENSATEG00000023809	tdrkh	99	69.659	ENSTNIG00000003157	tdrkh	99	69.659	Tetraodon_nigroviridis
ENSATEG00000023809	tdrkh	81	85.185	ENSXCOG00000016972	tdrkh	98	85.185	Xiphophorus_couchianus
ENSATEG00000023809	tdrkh	100	71.043	ENSXMAG00000014756	tdrkh	100	71.043	Xiphophorus_maculatus