EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000023838 (Gene tree)
Gene ID: 113152889
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 53591 bases
Position: chrOOHO01000016.1:8571045-8624635
Accession: 113152889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000034743	ResIII	PF04851.15	2.5e-07	1	1
ENSATEP00000034734	ResIII	PF04851.15	5.9e-07	1	1
ENSATEP00000034726	ResIII	PF04851.15	6e-07	1	1
ENSATEP00000034704	ResIII	PF04851.15	6.2e-07	1	1
ENSATEP00000034690	ResIII	PF04851.15	6.3e-07	1	1
ENSATEP00000034714	ResIII	PF04851.15	6.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000035220	-	8271	-	ENSATEP00000034714	1613 (aa)	-	-
ENSATET00000035232	-	8532	-	ENSATEP00000034726	1532 (aa)	-	-
ENSATET00000035193	-	8373	-	ENSATEP00000034690	1585 (aa)	XP_026202182	UPI000E461CB6
ENSATET00000035207	-	8286	-	ENSATEP00000034704	1556 (aa)	XP_026202185	UPI000E45D210
ENSATET00000035249	-	2952	-	ENSATEP00000034743	983 (aa)	-	-
ENSATET00000035240	-	8365	-	ENSATEP00000034734	1499 (aa)	XP_026202188	UPI000E461D1C

Gene Model

Click here to download ENSATEG00000023838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000023838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000023838	si:ch73-63e15.2	80	63.719	ENSATEG00000006667	sbno1	71	63.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000023838	si:ch73-63e15.2	94	70.466	ENSG00000064932	SBNO2	88	68.632	Homo_sapiens
ENSATEG00000023838	si:ch73-63e15.2	99	88.563	ENSAPOG00000003185	si:ch73-63e15.2	100	83.784	Acanthochromis_polyacanthus
ENSATEG00000023838	si:ch73-63e15.2	99	88.625	ENSAOCG00000016581	si:ch73-63e15.2	99	88.538	Amphiprion_ocellaris
ENSATEG00000023838	si:ch73-63e15.2	99	88.443	ENSAPEG00000008862	si:ch73-63e15.2	100	83.855	Amphiprion_percula
ENSATEG00000023838	si:ch73-63e15.2	93	74.532	ENSAPLG00000007158	SBNO2	89	73.639	Anas_platyrhynchos
ENSATEG00000023838	si:ch73-63e15.2	94	70.052	ENSANAG00000026685	SBNO2	89	67.436	Aotus_nancymaae
ENSATEG00000023838	si:ch73-63e15.2	99	84.314	ENSACLG00000005090	si:ch73-63e15.2	100	77.421	Astatotilapia_calliptera
ENSATEG00000023838	si:ch73-63e15.2	99	78.371	ENSAMXG00000015881	si:ch73-63e15.2	87	79.455	Astyanax_mexicanus
ENSATEG00000023838	si:ch73-63e15.2	99	77.157	ENSAMXG00000018868	sbno2a	96	80.415	Astyanax_mexicanus
ENSATEG00000023838	si:ch73-63e15.2	93	70.860	ENSBTAG00000020780	SBNO2	88	69.411	Bos_taurus
ENSATEG00000023838	si:ch73-63e15.2	93	71.279	ENSCAFG00000019543	SBNO2	90	65.657	Canis_familiaris
ENSATEG00000023838	si:ch73-63e15.2	93	71.279	ENSCAFG00020017115	SBNO2	95	65.657	Canis_lupus_dingo
ENSATEG00000023838	si:ch73-63e15.2	93	70.860	ENSCHIG00000026127	SBNO2	90	65.550	Capra_hircus
ENSATEG00000023838	si:ch73-63e15.2	93	70.157	ENSCAPG00000005731	SBNO2	94	66.841	Cavia_aperea
ENSATEG00000023838	si:ch73-63e15.2	93	70.157	ENSCPOG00000007477	SBNO2	86	66.753	Cavia_porcellus
ENSATEG00000023838	si:ch73-63e15.2	95	70.000	ENSCCAG00000037518	SBNO2	89	67.521	Cebus_capucinus
ENSATEG00000023838	si:ch73-63e15.2	94	70.600	ENSCATG00000037046	SBNO2	88	68.803	Cercocebus_atys
ENSATEG00000023838	si:ch73-63e15.2	94	70.509	ENSCLAG00000010178	SBNO2	99	68.881	Chinchilla_lanigera
ENSATEG00000023838	si:ch73-63e15.2	94	70.497	ENSCSAG00000012317	SBNO2	89	65.539	Chlorocebus_sabaeus
ENSATEG00000023838	si:ch73-63e15.2	95	75.130	ENSCPBG00000008920	SBNO2	80	83.721	Chrysemys_picta_bellii
ENSATEG00000023838	si:ch73-63e15.2	94	70.031	ENSCANG00000036745	SBNO2	96	68.332	Colobus_angolensis_palliatus
ENSATEG00000023838	si:ch73-63e15.2	89	70.620	ENSCGRG00001023960	Sbno2	88	64.996	Cricetulus_griseus_chok1gshd
ENSATEG00000023838	si:ch73-63e15.2	93	70.557	ENSCGRG00000011984	Sbno2	88	66.420	Cricetulus_griseus_crigri
ENSATEG00000023838	si:ch73-63e15.2	93	88.172	ENSCSEG00000006856	si:ch73-63e15.2	99	87.770	Cynoglossus_semilaevis
ENSATEG00000023838	si:ch73-63e15.2	99	84.051	ENSCVAG00000005663	si:ch73-63e15.2	90	80.959	Cyprinodon_variegatus
ENSATEG00000023838	si:ch73-63e15.2	99	76.112	ENSDARG00000098801	sbno2a	97	74.606	Danio_rerio
ENSATEG00000023838	si:ch73-63e15.2	99	77.051	ENSDARG00000016188	SBNO2	100	68.074	Danio_rerio
ENSATEG00000023838	si:ch73-63e15.2	93	71.069	ENSDORG00000002916	Sbno2	90	65.779	Dipodomys_ordii
ENSATEG00000023838	si:ch73-63e15.2	93	71.354	ENSEASG00005021621	SBNO2	89	68.862	Equus_asinus_asinus
ENSATEG00000023838	si:ch73-63e15.2	93	71.354	ENSECAG00000011827	SBNO2	89	68.948	Equus_caballus
ENSATEG00000023838	si:ch73-63e15.2	96	85.952	ENSELUG00000020457	si:ch73-63e15.2	91	80.100	Esox_lucius
ENSATEG00000023838	si:ch73-63e15.2	95	73.069	ENSFALG00000013988	SBNO2	97	66.420	Ficedula_albicollis
ENSATEG00000023838	si:ch73-63e15.2	93	68.101	ENSFDAG00000015186	SBNO2	86	66.990	Fukomys_damarensis
ENSATEG00000023838	si:ch73-63e15.2	99	84.721	ENSFHEG00000022262	si:ch73-63e15.2	88	83.804	Fundulus_heteroclitus
ENSATEG00000023838	si:ch73-63e15.2	93	86.910	ENSGMOG00000007542	si:ch73-63e15.2	95	88.438	Gadus_morhua
ENSATEG00000023838	si:ch73-63e15.2	95	72.995	ENSGALG00000037522	SBNO2	88	70.484	Gallus_gallus
ENSATEG00000023838	si:ch73-63e15.2	99	86.653	ENSGAFG00000004860	si:ch73-63e15.2	93	90.026	Gambusia_affinis
ENSATEG00000023838	si:ch73-63e15.2	93	87.644	ENSGACG00000013190	si:ch73-63e15.2	95	91.304	Gasterosteus_aculeatus
ENSATEG00000023838	si:ch73-63e15.2	93	76.677	ENSGAGG00000008348	SBNO2	87	73.430	Gopherus_agassizii
ENSATEG00000023838	si:ch73-63e15.2	99	84.412	ENSHBUG00000010742	si:ch73-63e15.2	100	77.483	Haplochromis_burtoni
ENSATEG00000023838	si:ch73-63e15.2	93	70.619	ENSHGLG00000008739	SBNO2	88	66.201	Heterocephalus_glaber_female
ENSATEG00000023838	si:ch73-63e15.2	94	69.938	ENSHGLG00100005269	SBNO2	99	68.522	Heterocephalus_glaber_male
ENSATEG00000023838	si:ch73-63e15.2	99	87.462	ENSHCOG00000000884	si:ch73-63e15.2	96	83.582	Hippocampus_comes
ENSATEG00000023838	si:ch73-63e15.2	99	78.758	ENSIPUG00000019672	sbno2	99	79.559	Ictalurus_punctatus
ENSATEG00000023838	si:ch73-63e15.2	99	77.976	ENSIPUG00000000537	si:ch73-63e15.2	96	73.956	Ictalurus_punctatus
ENSATEG00000023838	si:ch73-63e15.2	93	70.471	ENSSTOG00000025832	SBNO2	90	65.838	Ictidomys_tridecemlineatus
ENSATEG00000023838	si:ch73-63e15.2	93	67.400	ENSJJAG00000017397	Sbno2	89	63.554	Jaculus_jaculus
ENSATEG00000023838	si:ch73-63e15.2	99	85.182	ENSKMAG00000005541	si:ch73-63e15.2	91	82.564	Kryptolebias_marmoratus
ENSATEG00000023838	si:ch73-63e15.2	62	82.083	ENSLBEG00000005937	-	100	85.152	Labrus_bergylta
ENSATEG00000023838	si:ch73-63e15.2	99	88.889	ENSLBEG00000025016	si:ch73-63e15.2	99	90.582	Labrus_bergylta
ENSATEG00000023838	si:ch73-63e15.2	63	69.265	ENSLACG00000012598	SBNO2	100	71.244	Latimeria_chalumnae
ENSATEG00000023838	si:ch73-63e15.2	99	80.368	ENSLOCG00000004643	si:ch73-63e15.2	86	84.760	Lepisosteus_oculatus
ENSATEG00000023838	si:ch73-63e15.2	91	69.851	ENSLAFG00000008824	SBNO2	89	65.172	Loxodonta_africana
ENSATEG00000023838	si:ch73-63e15.2	94	68.808	ENSMFAG00000040030	SBNO2	90	67.122	Macaca_fascicularis
ENSATEG00000023838	si:ch73-63e15.2	94	70.497	ENSMMUG00000010886	SBNO2	87	67.767	Macaca_mulatta
ENSATEG00000023838	si:ch73-63e15.2	94	70.497	ENSMNEG00000039927	SBNO2	88	68.803	Macaca_nemestrina
ENSATEG00000023838	si:ch73-63e15.2	94	70.497	ENSMLEG00000038556	SBNO2	97	65.714	Mandrillus_leucophaeus
ENSATEG00000023838	si:ch73-63e15.2	99	87.953	ENSMAMG00000018758	si:ch73-63e15.2	100	84.389	Mastacembelus_armatus
ENSATEG00000023838	si:ch73-63e15.2	99	84.314	ENSMZEG00005010682	si:ch73-63e15.2	100	77.360	Maylandia_zebra
ENSATEG00000023838	si:ch73-63e15.2	94	73.286	ENSMGAG00000003801	SBNO2	90	73.214	Meleagris_gallopavo
ENSATEG00000023838	si:ch73-63e15.2	93	70.829	ENSMAUG00000008034	Sbno2	89	66.122	Mesocricetus_auratus
ENSATEG00000023838	si:ch73-63e15.2	93	71.039	ENSMICG00000013071	SBNO2	88	68.777	Microcebus_murinus
ENSATEG00000023838	si:ch73-63e15.2	93	70.978	ENSMOCG00000010504	Sbno2	88	66.804	Microtus_ochrogaster
ENSATEG00000023838	si:ch73-63e15.2	93	73.452	ENSMODG00000005382	SBNO2	88	68.121	Monodelphis_domestica
ENSATEG00000023838	si:ch73-63e15.2	99	83.690	ENSMALG00000021831	si:ch73-63e15.2	99	87.047	Monopterus_albus
ENSATEG00000023838	si:ch73-63e15.2	93	71.053	ENSMUSG00000035673	Sbno2	97	66.447	Mus_musculus
ENSATEG00000023838	si:ch73-63e15.2	93	70.934	MGP_PahariEiJ_G0030976	Sbno2	85	68.571	Mus_pahari
ENSATEG00000023838	si:ch73-63e15.2	93	71.039	MGP_SPRETEiJ_G0016381	Sbno2	94	66.694	Mus_spretus
ENSATEG00000023838	si:ch73-63e15.2	93	71.563	ENSMPUG00000008747	SBNO2	99	66.911	Mustela_putorius_furo
ENSATEG00000023838	si:ch73-63e15.2	93	70.545	ENSNGAG00000004308	Sbno2	86	68.202	Nannospalax_galili
ENSATEG00000023838	si:ch73-63e15.2	99	82.197	ENSNBRG00000022968	si:ch73-63e15.2	99	90.877	Neolamprologus_brichardi
ENSATEG00000023838	si:ch73-63e15.2	82	77.872	ENSNLEG00000001305	SBNO2	88	69.976	Nomascus_leucogenys
ENSATEG00000023838	si:ch73-63e15.2	78	68.758	ENSMEUG00000013511	-	78	67.622	Notamacropus_eugenii
ENSATEG00000023838	si:ch73-63e15.2	93	70.452	ENSOPRG00000017238	SBNO2	94	68.750	Ochotona_princeps
ENSATEG00000023838	si:ch73-63e15.2	93	69.247	ENSODEG00000011822	SBNO2	89	65.132	Octodon_degus
ENSATEG00000023838	si:ch73-63e15.2	99	82.904	ENSONIG00000002490	si:ch73-63e15.2	99	86.156	Oreochromis_niloticus
ENSATEG00000023838	si:ch73-63e15.2	95	88.854	ENSORLG00000000913	si:ch73-63e15.2	91	81.416	Oryzias_latipes
ENSATEG00000023838	si:ch73-63e15.2	99	84.570	ENSORLG00020010978	si:ch73-63e15.2	92	80.326	Oryzias_latipes_hni
ENSATEG00000023838	si:ch73-63e15.2	95	88.854	ENSORLG00015000202	si:ch73-63e15.2	91	81.416	Oryzias_latipes_hsok
ENSATEG00000023838	si:ch73-63e15.2	99	84.000	ENSOMEG00000000359	si:ch73-63e15.2	91	80.962	Oryzias_melastigma
ENSATEG00000023838	si:ch73-63e15.2	93	69.497	ENSOARG00000011130	SBNO2	86	66.551	Ovis_aries
ENSATEG00000023838	si:ch73-63e15.2	94	70.363	ENSPPAG00000032482	SBNO2	90	68.244	Pan_paniscus
ENSATEG00000023838	si:ch73-63e15.2	94	70.466	ENSPTRG00000010185	SBNO2	88	69.231	Pan_troglodytes
ENSATEG00000023838	si:ch73-63e15.2	94	66.356	ENSPANG00000009658	SBNO2	88	64.957	Papio_anubis
ENSATEG00000023838	si:ch73-63e15.2	99	74.573	ENSPKIG00000009707	-	84	78.711	Paramormyrops_kingsleyae
ENSATEG00000023838	si:ch73-63e15.2	94	82.842	ENSPKIG00000024201	si:ch73-63e15.2	85	83.248	Paramormyrops_kingsleyae
ENSATEG00000023838	si:ch73-63e15.2	93	73.548	ENSPSIG00000002852	SBNO2	99	74.164	Pelodiscus_sinensis
ENSATEG00000023838	si:ch73-63e15.2	99	86.930	ENSPMGG00000014375	si:ch73-63e15.2	95	86.224	Periophthalmus_magnuspinnatus
ENSATEG00000023838	si:ch73-63e15.2	93	68.710	ENSPEMG00000024122	Sbno2	91	63.304	Peromyscus_maniculatus_bairdii
ENSATEG00000023838	si:ch73-63e15.2	90	75.468	ENSPCIG00000011264	SBNO2	89	68.502	Phascolarctos_cinereus
ENSATEG00000023838	si:ch73-63e15.2	99	83.525	ENSPFOG00000004096	si:ch73-63e15.2	100	87.629	Poecilia_formosa
ENSATEG00000023838	si:ch73-63e15.2	95	87.409	ENSPLAG00000014653	si:ch73-63e15.2	100	76.958	Poecilia_latipinna
ENSATEG00000023838	si:ch73-63e15.2	99	86.855	ENSPMEG00000002129	si:ch73-63e15.2	96	86.707	Poecilia_mexicana
ENSATEG00000023838	si:ch73-63e15.2	99	83.333	ENSPREG00000006755	si:ch73-63e15.2	100	76.654	Poecilia_reticulata
ENSATEG00000023838	si:ch73-63e15.2	84	72.999	ENSPCAG00000012256	SBNO2	79	68.406	Procavia_capensis
ENSATEG00000023838	si:ch73-63e15.2	93	64.046	ENSPCOG00000015216	SBNO2	88	62.457	Propithecus_coquereli
ENSATEG00000023838	si:ch73-63e15.2	99	84.314	ENSPNYG00000019926	si:ch73-63e15.2	100	77.360	Pundamilia_nyererei
ENSATEG00000023838	si:ch73-63e15.2	99	78.689	ENSPNAG00000020260	si:ch73-63e15.2	84	82.891	Pygocentrus_nattereri
ENSATEG00000023838	si:ch73-63e15.2	99	77.920	ENSPNAG00000026609	sbno2a	98	72.445	Pygocentrus_nattereri
ENSATEG00000023838	si:ch73-63e15.2	93	71.144	ENSRNOG00000013987	Sbno2	89	69.278	Rattus_norvegicus
ENSATEG00000023838	si:ch73-63e15.2	94	68.958	ENSRBIG00000009740	SBNO2	86	67.969	Rhinopithecus_bieti
ENSATEG00000023838	si:ch73-63e15.2	79	71.411	ENSRROG00000044671	SBNO2	86	71.002	Rhinopithecus_roxellana
ENSATEG00000023838	si:ch73-63e15.2	95	70.000	ENSSBOG00000023562	SBNO2	89	67.778	Saimiri_boliviensis_boliviensis
ENSATEG00000023838	si:ch73-63e15.2	93	72.945	ENSSHAG00000010241	SBNO2	99	71.478	Sarcophilus_harrisii
ENSATEG00000023838	si:ch73-63e15.2	93	83.388	ENSSFOG00015005861	si:ch73-63e15.2	99	80.049	Scleropages_formosus
ENSATEG00000023838	si:ch73-63e15.2	99	87.843	ENSSMAG00000012489	si:ch73-63e15.2	100	84.568	Scophthalmus_maximus
ENSATEG00000023838	si:ch73-63e15.2	99	88.431	ENSSDUG00000003527	si:ch73-63e15.2	100	85.470	Seriola_dumerili
ENSATEG00000023838	si:ch73-63e15.2	99	88.431	ENSSLDG00000004623	si:ch73-63e15.2	100	85.409	Seriola_lalandi_dorsalis
ENSATEG00000023838	si:ch73-63e15.2	93	94.530	ENSSPAG00000017717	si:ch73-63e15.2	100	83.744	Stegastes_partitus
ENSATEG00000023838	si:ch73-63e15.2	93	71.069	ENSSSCG00000030042	SBNO2	90	68.435	Sus_scrofa
ENSATEG00000023838	si:ch73-63e15.2	93	89.936	ENSTRUG00000018193	si:ch73-63e15.2	86	90.668	Takifugu_rubripes
ENSATEG00000023838	si:ch73-63e15.2	52	93.910	ENSTNIG00000000856	si:ch73-63e15.2	99	93.436	Tetraodon_nigroviridis
ENSATEG00000023838	si:ch73-63e15.2	93	71.596	ENSUAMG00000006568	SBNO2	91	74.622	Ursus_americanus
ENSATEG00000023838	si:ch73-63e15.2	93	71.384	ENSVVUG00000022823	SBNO2	89	65.603	Vulpes_vulpes
ENSATEG00000023838	si:ch73-63e15.2	84	76.518	ENSXETG00000021579	sbno2	91	76.518	Xenopus_tropicalis
ENSATEG00000023838	si:ch73-63e15.2	95	87.751	ENSXCOG00000009209	si:ch73-63e15.2	93	91.458	Xiphophorus_couchianus
ENSATEG00000023838	si:ch73-63e15.2	99	85.462	ENSXMAG00000012091	si:ch73-63e15.2	91	89.587	Xiphophorus_maculatus