EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000023860 (Gene tree)
Gene ID: 113153767
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 10325 bases
Position: chrOOHO01000017.1:4895706-4906030
Accession: 113153767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000034716	R3H	PF01424.22	2.3e-10	1	1
ENSATEP00000034720	R3H	PF01424.22	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000035226	-	6317	-	ENSATEP00000034720	390 (aa)	-	-
ENSATET00000035222	-	3779	-	ENSATEP00000034716	402 (aa)	XP_026203333	UPI000E45902E

Gene Model

Click here to download ENSATEG00000023860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000023860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000023860	r3hcc1	99	32.542	ENSG00000104679	R3HCC1	81	38.017	Homo_sapiens
ENSATEG00000023860	r3hcc1	99	63.104	ENSAPOG00000003616	r3hcc1	86	62.564	Acanthochromis_polyacanthus
ENSATEG00000023860	r3hcc1	99	31.250	ENSAMEG00000002963	R3HCC1	56	43.151	Ailuropoda_melanoleuca
ENSATEG00000023860	r3hcc1	100	56.944	ENSACIG00000017144	r3hcc1	92	56.490	Amphilophus_citrinellus
ENSATEG00000023860	r3hcc1	99	65.736	ENSAOCG00000003945	r3hcc1	96	64.619	Amphiprion_ocellaris
ENSATEG00000023860	r3hcc1	99	65.482	ENSAPEG00000003613	r3hcc1	96	64.373	Amphiprion_percula
ENSATEG00000023860	r3hcc1	97	35.627	ENSACAG00000016627	R3HCC1	52	50.000	Anolis_carolinensis
ENSATEG00000023860	r3hcc1	99	31.442	ENSANAG00000036169	R3HCC1	53	63.265	Aotus_nancymaae
ENSATEG00000023860	r3hcc1	98	30.345	ENSBTAG00000025830	R3HCC1	58	41.096	Bos_taurus
ENSATEG00000023860	r3hcc1	99	30.930	ENSCJAG00000020118	R3HCC1	54	63.265	Callithrix_jacchus
ENSATEG00000023860	r3hcc1	70	41.975	ENSCAFG00000009210	R3HCC1	59	42.177	Canis_familiaris
ENSATEG00000023860	r3hcc1	99	32.524	ENSTSYG00000000511	R3HCC1	50	40.588	Carlito_syrichta
ENSATEG00000023860	r3hcc1	69	37.143	ENSCAPG00000015813	R3HCC1	58	37.143	Cavia_aperea
ENSATEG00000023860	r3hcc1	72	39.766	ENSCPOG00000009696	R3HCC1	58	40.373	Cavia_porcellus
ENSATEG00000023860	r3hcc1	54	63.265	ENSCCAG00000037811	R3HCC1	53	63.265	Cebus_capucinus
ENSATEG00000023860	r3hcc1	99	31.567	ENSCATG00000032971	R3HCC1	54	63.265	Cercocebus_atys
ENSATEG00000023860	r3hcc1	98	34.826	ENSCLAG00000015556	R3HCC1	76	32.506	Chinchilla_lanigera
ENSATEG00000023860	r3hcc1	69	44.667	ENSCHOG00000000396	R3HCC1	58	44.286	Choloepus_hoffmanni
ENSATEG00000023860	r3hcc1	99	30.332	ENSCANG00000029441	R3HCC1	55	63.265	Colobus_angolensis_palliatus
ENSATEG00000023860	r3hcc1	51	63.265	ENSCGRG00001014977	R3hcc1	56	42.466	Cricetulus_griseus_chok1gshd
ENSATEG00000023860	r3hcc1	51	63.265	ENSCGRG00000004454	R3hcc1	56	42.466	Cricetulus_griseus_crigri
ENSATEG00000023860	r3hcc1	98	66.667	ENSCSEG00000005748	r3hcc1	93	65.394	Cynoglossus_semilaevis
ENSATEG00000023860	r3hcc1	82	54.360	ENSCVAG00000002640	r3hcc1	90	53.757	Cyprinodon_variegatus
ENSATEG00000023860	r3hcc1	98	44.192	ENSDARG00000099593	r3hcc1	91	42.931	Danio_rerio
ENSATEG00000023860	r3hcc1	68	43.506	ENSDORG00000026365	R3hcc1	56	43.151	Dipodomys_ordii
ENSATEG00000023860	r3hcc1	69	43.125	ENSEASG00005018782	R3HCC1	53	40.462	Equus_asinus_asinus
ENSATEG00000023860	r3hcc1	97	51.629	ENSELUG00000023650	r3hcc1	97	51.724	Esox_lucius
ENSATEG00000023860	r3hcc1	99	32.530	ENSFCAG00000012395	R3HCC1	76	32.995	Felis_catus
ENSATEG00000023860	r3hcc1	66	42.282	ENSFDAG00000001572	R3HCC1	56	42.446	Fukomys_damarensis
ENSATEG00000023860	r3hcc1	95	40.576	ENSGMOG00000017590	-	84	49.153	Gadus_morhua
ENSATEG00000023860	r3hcc1	98	60.902	ENSGAFG00000008747	-	90	59.151	Gambusia_affinis
ENSATEG00000023860	r3hcc1	97	63.384	ENSGACG00000008447	r3hcc1	89	63.010	Gasterosteus_aculeatus
ENSATEG00000023860	r3hcc1	99	31.829	ENSGGOG00000013817	R3HCC1	51	63.265	Gorilla_gorilla
ENSATEG00000023860	r3hcc1	77	64.530	ENSHBUG00000022250	-	90	64.679	Haplochromis_burtoni
ENSATEG00000023860	r3hcc1	98	31.034	ENSHGLG00000010517	R3HCC1	83	30.637	Heterocephalus_glaber_female
ENSATEG00000023860	r3hcc1	98	31.034	ENSHGLG00100006388	R3HCC1	83	30.637	Heterocephalus_glaber_male
ENSATEG00000023860	r3hcc1	97	55.897	ENSHCOG00000011745	r3hcc1	85	56.331	Hippocampus_comes
ENSATEG00000023860	r3hcc1	98	48.010	ENSIPUG00000024504	r3hcc1	80	48.010	Ictalurus_punctatus
ENSATEG00000023860	r3hcc1	73	46.541	ENSSTOG00000027130	R3HCC1	57	46.575	Ictidomys_tridecemlineatus
ENSATEG00000023860	r3hcc1	52	63.265	ENSJJAG00000013075	R3hcc1	59	43.709	Jaculus_jaculus
ENSATEG00000023860	r3hcc1	100	60.784	ENSKMAG00000000286	r3hcc1	97	59.694	Kryptolebias_marmoratus
ENSATEG00000023860	r3hcc1	98	35.308	ENSLACG00000011894	R3HCC1	91	35.610	Latimeria_chalumnae
ENSATEG00000023860	r3hcc1	98	46.437	ENSLOCG00000015442	r3hcc1	68	69.286	Lepisosteus_oculatus
ENSATEG00000023860	r3hcc1	99	31.336	ENSMFAG00000032894	R3HCC1	54	63.265	Macaca_fascicularis
ENSATEG00000023860	r3hcc1	99	31.336	ENSMMUG00000016655	R3HCC1	54	63.265	Macaca_mulatta
ENSATEG00000023860	r3hcc1	99	30.698	ENSMNEG00000043283	R3HCC1	54	63.265	Macaca_nemestrina
ENSATEG00000023860	r3hcc1	99	30.716	ENSMLEG00000030147	R3HCC1	54	63.265	Mandrillus_leucophaeus
ENSATEG00000023860	r3hcc1	100	71.852	ENSMAMG00000018146	r3hcc1	97	70.951	Mastacembelus_armatus
ENSATEG00000023860	r3hcc1	97	33.095	ENSMGAG00000001356	R3HCC1	83	32.338	Meleagris_gallopavo
ENSATEG00000023860	r3hcc1	64	44.366	ENSMAUG00000016096	R3hcc1	66	38.579	Mesocricetus_auratus
ENSATEG00000023860	r3hcc1	99	32.168	ENSMICG00000011146	R3HCC1	52	53.333	Microcebus_murinus
ENSATEG00000023860	r3hcc1	66	43.243	ENSMOCG00000018508	R3hcc1	55	42.361	Microtus_ochrogaster
ENSATEG00000023860	r3hcc1	100	69.533	ENSMALG00000000731	r3hcc1	100	68.796	Monopterus_albus
ENSATEG00000023860	r3hcc1	66	42.568	MGP_CAROLIEiJ_G0019467	R3hcc1	56	41.781	Mus_caroli
ENSATEG00000023860	r3hcc1	66	42.667	ENSMUSG00000034194	R3hcc1	56	41.781	Mus_musculus
ENSATEG00000023860	r3hcc1	66	42.667	MGP_PahariEiJ_G0030484	R3hcc1	58	39.521	Mus_pahari
ENSATEG00000023860	r3hcc1	66	42.667	MGP_SPRETEiJ_G0020359	R3hcc1	54	41.781	Mus_spretus
ENSATEG00000023860	r3hcc1	99	31.542	ENSMLUG00000000266	R3HCC1	83	31.144	Myotis_lucifugus
ENSATEG00000023860	r3hcc1	64	45.455	ENSNGAG00000016747	R3hcc1	58	43.151	Nannospalax_galili
ENSATEG00000023860	r3hcc1	90	78.788	ENSNBRG00000016975	-	77	95.833	Neolamprologus_brichardi
ENSATEG00000023860	r3hcc1	89	30.026	ENSNLEG00000015944	R3HCC1	58	37.324	Nomascus_leucogenys
ENSATEG00000023860	r3hcc1	98	32.195	ENSMEUG00000010587	R3HCC1	90	31.527	Notamacropus_eugenii
ENSATEG00000023860	r3hcc1	99	33.002	ENSOPRG00000013390	R3HCC1	61	42.208	Ochotona_princeps
ENSATEG00000023860	r3hcc1	68	41.026	ENSODEG00000007529	R3HCC1	54	43.243	Octodon_degus
ENSATEG00000023860	r3hcc1	97	33.831	ENSOCUG00000023554	R3HCC1	78	31.017	Oryctolagus_cuniculus
ENSATEG00000023860	r3hcc1	99	52.897	ENSORLG00000016816	r3hcc1	97	52.051	Oryzias_latipes
ENSATEG00000023860	r3hcc1	99	51.238	ENSORLG00020012005	r3hcc1	97	51.538	Oryzias_latipes_hni
ENSATEG00000023860	r3hcc1	99	51.980	ENSORLG00015007018	r3hcc1	97	52.051	Oryzias_latipes_hsok
ENSATEG00000023860	r3hcc1	99	53.285	ENSOMEG00000000816	r3hcc1	97	52.632	Oryzias_melastigma
ENSATEG00000023860	r3hcc1	69	42.500	ENSOGAG00000001291	R3HCC1	56	42.466	Otolemur_garnettii
ENSATEG00000023860	r3hcc1	99	31.905	ENSPPAG00000033165	R3HCC1	52	63.265	Pan_paniscus
ENSATEG00000023860	r3hcc1	99	30.805	ENSPPRG00000002522	R3HCC1	54	63.265	Panthera_pardus
ENSATEG00000023860	r3hcc1	99	30.415	ENSPTIG00000011230	R3HCC1	54	64.583	Panthera_tigris_altaica
ENSATEG00000023860	r3hcc1	99	32.619	ENSPTRG00000020076	R3HCC1	52	63.265	Pan_troglodytes
ENSATEG00000023860	r3hcc1	99	30.000	ENSPANG00000000453	R3HCC1	55	63.265	Papio_anubis
ENSATEG00000023860	r3hcc1	98	47.436	ENSPKIG00000014426	-	92	45.288	Paramormyrops_kingsleyae
ENSATEG00000023860	r3hcc1	98	49.487	ENSPKIG00000020397	-	93	48.404	Paramormyrops_kingsleyae
ENSATEG00000023860	r3hcc1	97	36.077	ENSPSIG00000017664	R3HCC1	90	35.468	Pelodiscus_sinensis
ENSATEG00000023860	r3hcc1	50	66.667	ENSPMGG00000007792	r3hcc1	55	56.835	Periophthalmus_magnuspinnatus
ENSATEG00000023860	r3hcc1	64	45.070	ENSPEMG00000007118	R3hcc1	54	44.203	Peromyscus_maniculatus_bairdii
ENSATEG00000023860	r3hcc1	63	43.750	ENSPCIG00000022718	-	50	43.846	Phascolarctos_cinereus
ENSATEG00000023860	r3hcc1	100	60.934	ENSPFOG00000022301	r3hcc1	85	60.614	Poecilia_formosa
ENSATEG00000023860	r3hcc1	100	60.934	ENSPLAG00000010794	r3hcc1	85	60.614	Poecilia_latipinna
ENSATEG00000023860	r3hcc1	100	60.934	ENSPMEG00000022515	r3hcc1	85	60.614	Poecilia_mexicana
ENSATEG00000023860	r3hcc1	98	61.654	ENSPREG00000000713	r3hcc1	84	60.102	Poecilia_reticulata
ENSATEG00000023860	r3hcc1	64	44.286	ENSPCAG00000012229	R3HCC1	55	44.444	Procavia_capensis
ENSATEG00000023860	r3hcc1	99	31.702	ENSPCOG00000027554	R3HCC1	52	53.333	Propithecus_coquereli
ENSATEG00000023860	r3hcc1	95	46.907	ENSPNAG00000023875	r3hcc1	94	46.907	Pygocentrus_nattereri
ENSATEG00000023860	r3hcc1	68	42.073	ENSRNOG00000016777	AABR07018321.1	51	38.674	Rattus_norvegicus
ENSATEG00000023860	r3hcc1	99	31.840	ENSRBIG00000028045	R3HCC1	55	63.265	Rhinopithecus_bieti
ENSATEG00000023860	r3hcc1	97	32.126	ENSRROG00000031126	R3HCC1	55	63.265	Rhinopithecus_roxellana
ENSATEG00000023860	r3hcc1	99	31.401	ENSSBOG00000022590	R3HCC1	53	65.306	Saimiri_boliviensis_boliviensis
ENSATEG00000023860	r3hcc1	99	49.871	ENSSFOG00015013507	r3hcc1	76	56.757	Scleropages_formosus
ENSATEG00000023860	r3hcc1	100	74.817	ENSSMAG00000008647	r3hcc1	97	74.809	Scophthalmus_maximus
ENSATEG00000023860	r3hcc1	100	77.506	ENSSDUG00000022786	r3hcc1	91	77.863	Seriola_dumerili
ENSATEG00000023860	r3hcc1	100	77.506	ENSSLDG00000019031	r3hcc1	91	77.863	Seriola_lalandi_dorsalis
ENSATEG00000023860	r3hcc1	99	67.176	ENSSPAG00000013497	r3hcc1	93	65.296	Stegastes_partitus
ENSATEG00000023860	r3hcc1	100	53.980	ENSTRUG00000015880	r3hcc1	95	51.861	Takifugu_rubripes
ENSATEG00000023860	r3hcc1	69	42.500	ENSUAMG00000007344	R3HCC1	60	43.151	Ursus_americanus
ENSATEG00000023860	r3hcc1	70	41.615	ENSVVUG00000005056	R3HCC1	63	40.116	Vulpes_vulpes
ENSATEG00000023860	r3hcc1	97	56.771	ENSXCOG00000017626	r3hcc1	83	56.349	Xiphophorus_couchianus
ENSATEG00000023860	r3hcc1	98	60.401	ENSXMAG00000018375	r3hcc1	90	60.212	Xiphophorus_maculatus