EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000024315 (Gene tree)
Gene ID: 113160621
Gene Symbol: srl
Alias: im:6899248|wu:fb94b10|zgc:153844
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 14481 bases
Position: chrOOHO01000019.1:13589487-13603967
Accession: 113160621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000035367	MMR_HSR1	PF01926.23	1.9e-08	1	1
ENSATEP00000035370	MMR_HSR1	PF01926.23	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000035877	-	4516	-	ENSATEP00000035367	483 (aa)	XP_026213794	UPI000E4627BE
ENSATET00000035880	-	4480	-	ENSATEP00000035370	471 (aa)	XP_026213877	UPI000E462A46

Gene Model

Click here to download ENSATEG00000024315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000024315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000024315	srl	87	31.220	ENSATEG00000013980	ehd1a	74	31.220
ENSATEG00000024315	srl	97	75.000	ENSATEG00000009643	SRL	54	75.214
ENSATEG00000024315	srl	54	38.583	ENSATEG00000004166	-	56	35.505
ENSATEG00000024315	srl	79	33.780	ENSATEG00000002224	ehd3	69	34.026
ENSATEG00000024315	srl	85	32.258	ENSATEG00000015573	ehd4	71	32.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000024315	srl	97	81.538	ENSG00000185739	SRL	99	83.488	Homo_sapiens
ENSATEG00000024315	srl	100	97.452	ENSAPOG00000018093	srl	100	97.452	Acanthochromis_polyacanthus
ENSATEG00000024315	srl	94	77.427	ENSAPOG00000012432	SRL	99	77.427	Acanthochromis_polyacanthus
ENSATEG00000024315	srl	97	81.004	ENSAMEG00000010862	SRL	52	81.004	Ailuropoda_melanoleuca
ENSATEG00000024315	srl	95	75.223	ENSACIG00000015419	SRL	99	75.336	Amphilophus_citrinellus
ENSATEG00000024315	srl	96	97.561	ENSACIG00000015799	srl	100	97.561	Amphilophus_citrinellus
ENSATEG00000024315	srl	92	98.387	ENSAOCG00000007574	srl	100	98.387	Amphiprion_ocellaris
ENSATEG00000024315	srl	97	75.870	ENSAOCG00000017049	SRL	100	76.087	Amphiprion_ocellaris
ENSATEG00000024315	srl	97	72.549	ENSAPEG00000006533	SRL	100	73.043	Amphiprion_percula
ENSATEG00000024315	srl	100	97.723	ENSAPEG00000006911	srl	100	97.723	Amphiprion_percula
ENSATEG00000024315	srl	100	80.943	ENSACAG00000016380	SRL	89	82.172	Anolis_carolinensis
ENSATEG00000024315	srl	97	73.504	ENSACLG00000024674	SRL	57	74.781	Astatotilapia_calliptera
ENSATEG00000024315	srl	100	96.687	ENSACLG00000027685	srl	100	96.687	Astatotilapia_calliptera
ENSATEG00000024315	srl	93	73.982	ENSAMXG00000038693	SRL	100	73.951	Astyanax_mexicanus
ENSATEG00000024315	srl	99	92.531	ENSAMXG00000018789	srl	92	92.531	Astyanax_mexicanus
ENSATEG00000024315	srl	96	82.018	ENSBTAG00000001078	SRL	56	84.127	Bos_taurus
ENSATEG00000024315	srl	94	83.258	ENSCJAG00000019750	SRL	100	79.704	Callithrix_jacchus
ENSATEG00000024315	srl	97	81.223	ENSCAFG00000019233	SRL	82	83.032	Canis_familiaris
ENSATEG00000024315	srl	94	83.032	ENSCAFG00020025024	SRL	54	83.032	Canis_lupus_dingo
ENSATEG00000024315	srl	99	81.034	ENSCHIG00000017927	SRL	55	84.127	Capra_hircus
ENSATEG00000024315	srl	100	79.915	ENSTSYG00000007919	SRL	99	84.186	Carlito_syrichta
ENSATEG00000024315	srl	97	81.978	ENSCPOG00000012643	SRL	100	80.508	Cavia_porcellus
ENSATEG00000024315	srl	94	77.602	ENSCCAG00000032646	SRL	100	84.433	Cebus_capucinus
ENSATEG00000024315	srl	97	81.538	ENSCATG00000032227	-	100	79.704	Cercocebus_atys
ENSATEG00000024315	srl	97	82.198	ENSCLAG00000016242	SRL	100	80.720	Chinchilla_lanigera
ENSATEG00000024315	srl	82	85.974	ENSCHOG00000001618	SRL	52	85.974	Choloepus_hoffmanni
ENSATEG00000024315	srl	96	86.528	ENSCPBG00000026371	SRL	98	82.316	Chrysemys_picta_bellii
ENSATEG00000024315	srl	89	60.280	ENSCING00000005231	-	93	60.911	Ciona_intestinalis
ENSATEG00000024315	srl	97	81.538	ENSCANG00000035872	SRL	99	83.488	Colobus_angolensis_palliatus
ENSATEG00000024315	srl	97	82.857	ENSCGRG00001016630	Srl	100	81.144	Cricetulus_griseus_chok1gshd
ENSATEG00000024315	srl	97	82.857	ENSCGRG00000005458	Srl	100	81.144	Cricetulus_griseus_crigri
ENSATEG00000024315	srl	100	95.329	ENSCSEG00000016151	srl	100	95.329	Cynoglossus_semilaevis
ENSATEG00000024315	srl	99	72.747	ENSCSEG00000011866	SRL	89	75.676	Cynoglossus_semilaevis
ENSATEG00000024315	srl	100	93.789	ENSCVAG00000003513	srl	100	94.824	Cyprinodon_variegatus
ENSATEG00000024315	srl	97	75.427	ENSCVAG00000022465	SRL	60	77.093	Cyprinodon_variegatus
ENSATEG00000024315	srl	100	92.133	ENSDARG00000104587	srl	100	92.133	Danio_rerio
ENSATEG00000024315	srl	80	78.385	ENSDARG00000112959	CABZ01072309.1	100	78.385	Danio_rerio
ENSATEG00000024315	srl	94	83.484	ENSDNOG00000011643	SRL	53	83.484	Dasypus_novemcinctus
ENSATEG00000024315	srl	97	82.857	ENSDORG00000014807	Srl	100	81.144	Dipodomys_ordii
ENSATEG00000024315	srl	79	66.043	ENSEBUG00000015937	srl	94	66.043	Eptatretus_burgeri
ENSATEG00000024315	srl	94	84.127	ENSEASG00005000942	SRL	53	84.127	Equus_asinus_asinus
ENSATEG00000024315	srl	99	80.932	ENSECAG00000024219	SRL	99	80.720	Equus_caballus
ENSATEG00000024315	srl	100	86.885	ENSELUG00000015616	srl	100	86.653	Esox_lucius
ENSATEG00000024315	srl	100	79.281	ENSFCAG00000022075	SRL	100	79.493	Felis_catus
ENSATEG00000024315	srl	93	83.636	ENSFALG00000004328	SRL	63	83.636	Ficedula_albicollis
ENSATEG00000024315	srl	97	82.675	ENSFDAG00000006199	SRL	100	81.568	Fukomys_damarensis
ENSATEG00000024315	srl	100	73.196	ENSFHEG00000011854	SRL	99	77.252	Fundulus_heteroclitus
ENSATEG00000024315	srl	100	94.824	ENSFHEG00000011239	srl	100	94.824	Fundulus_heteroclitus
ENSATEG00000024315	srl	94	92.291	ENSGMOG00000014954	srl	100	92.291	Gadus_morhua
ENSATEG00000024315	srl	99	80.892	ENSGALG00000038884	SRL	98	81.425	Gallus_gallus
ENSATEG00000024315	srl	95	77.728	ENSGAFG00000016984	SRL	99	78.378	Gambusia_affinis
ENSATEG00000024315	srl	100	95.031	ENSGAFG00000000010	srl	100	95.031	Gambusia_affinis
ENSATEG00000024315	srl	94	97.582	ENSGACG00000011332	srl	100	97.582	Gasterosteus_aculeatus
ENSATEG00000024315	srl	97	81.538	ENSGGOG00000011312	-	100	79.493	Gorilla_gorilla
ENSATEG00000024315	srl	97	73.932	ENSHBUG00000015710	SRL	58	73.932	Haplochromis_burtoni
ENSATEG00000024315	srl	100	96.687	ENSHBUG00000007581	srl	100	96.687	Haplochromis_burtoni
ENSATEG00000024315	srl	97	82.637	ENSHGLG00000015271	SRL	100	81.144	Heterocephalus_glaber_female
ENSATEG00000024315	srl	97	82.637	ENSHGLG00100019378	SRL	100	81.144	Heterocephalus_glaber_male
ENSATEG00000024315	srl	100	96.186	ENSHCOG00000008687	srl	99	97.098	Hippocampus_comes
ENSATEG00000024315	srl	94	74.945	ENSHCOG00000001012	SRL	50	74.945	Hippocampus_comes
ENSATEG00000024315	srl	100	91.511	ENSIPUG00000012513	srl	100	91.511	Ictalurus_punctatus
ENSATEG00000024315	srl	93	70.183	ENSIPUG00000011609	SRL	95	70.183	Ictalurus_punctatus
ENSATEG00000024315	srl	96	82.237	ENSSTOG00000021151	-	100	80.720	Ictidomys_tridecemlineatus
ENSATEG00000024315	srl	100	81.780	ENSJJAG00000016400	Srl	100	81.780	Jaculus_jaculus
ENSATEG00000024315	srl	98	94.926	ENSKMAG00000014115	srl	95	94.926	Kryptolebias_marmoratus
ENSATEG00000024315	srl	94	77.098	ENSKMAG00000019537	SRL	100	77.098	Kryptolebias_marmoratus
ENSATEG00000024315	srl	100	95.329	ENSLBEG00000026643	srl	100	95.329	Labrus_bergylta
ENSATEG00000024315	srl	97	74.074	ENSLBEG00000013811	SRL	99	74.292	Labrus_bergylta
ENSATEG00000024315	srl	100	82.609	ENSLACG00000002825	SRL	98	85.294	Latimeria_chalumnae
ENSATEG00000024315	srl	99	87.527	ENSLOCG00000002644	srl	98	88.453	Lepisosteus_oculatus
ENSATEG00000024315	srl	94	83.032	ENSLAFG00000006329	SRL	50	83.032	Loxodonta_africana
ENSATEG00000024315	srl	91	83.488	ENSMFAG00000037383	SRL	99	83.488	Macaca_fascicularis
ENSATEG00000024315	srl	97	81.223	ENSMNEG00000019236	-	93	83.258	Macaca_nemestrina
ENSATEG00000024315	srl	97	74.505	ENSMLEG00000032156	SRL	100	72.939	Mandrillus_leucophaeus
ENSATEG00000024315	srl	94	75.771	ENSMAMG00000013756	SRL	53	75.771	Mastacembelus_armatus
ENSATEG00000024315	srl	99	96.567	ENSMAMG00000023322	srl	99	96.567	Mastacembelus_armatus
ENSATEG00000024315	srl	100	96.687	ENSMZEG00005004548	srl	100	96.687	Maylandia_zebra
ENSATEG00000024315	srl	97	73.718	ENSMZEG00005004010	SRL	59	73.718	Maylandia_zebra
ENSATEG00000024315	srl	96	82.159	ENSMGAG00000009342	SRL	92	86.849	Meleagris_gallopavo
ENSATEG00000024315	srl	96	82.237	ENSMICG00000032307	SRL	100	80.550	Microcebus_murinus
ENSATEG00000024315	srl	100	80.297	ENSMOCG00000008208	Srl	100	80.297	Microtus_ochrogaster
ENSATEG00000024315	srl	96	96.444	ENSMMOG00000013970	srl	100	96.444	Mola_mola
ENSATEG00000024315	srl	94	74.725	ENSMMOG00000021572	SRL	99	74.505	Mola_mola
ENSATEG00000024315	srl	96	83.149	ENSMODG00000016380	-	50	84.354	Monodelphis_domestica
ENSATEG00000024315	srl	89	77.327	ENSMALG00000000670	SRL	98	77.327	Monopterus_albus
ENSATEG00000024315	srl	100	96.178	ENSMALG00000005039	srl	100	96.178	Monopterus_albus
ENSATEG00000024315	srl	97	83.516	MGP_CAROLIEiJ_G0020400	Srl	100	82.203	Mus_caroli
ENSATEG00000024315	srl	97	83.516	ENSMUSG00000022519	Srl	100	82.203	Mus_musculus
ENSATEG00000024315	srl	97	83.516	MGP_SPRETEiJ_G0021294	Srl	100	82.203	Mus_spretus
ENSATEG00000024315	srl	94	83.032	ENSMPUG00000015025	SRL	54	83.032	Mustela_putorius_furo
ENSATEG00000024315	srl	97	82.096	ENSMLUG00000030733	SRL	56	83.937	Myotis_lucifugus
ENSATEG00000024315	srl	97	83.297	ENSNGAG00000019741	Srl	100	81.780	Nannospalax_galili
ENSATEG00000024315	srl	100	96.178	ENSNBRG00000023775	srl	100	96.178	Neolamprologus_brichardi
ENSATEG00000024315	srl	97	73.718	ENSNBRG00000002422	SRL	56	76.389	Neolamprologus_brichardi
ENSATEG00000024315	srl	97	75.824	ENSNLEG00000029051	SRL	100	73.996	Nomascus_leucogenys
ENSATEG00000024315	srl	98	75.217	ENSOPRG00000000477	-	52	77.376	Ochotona_princeps
ENSATEG00000024315	srl	97	82.637	ENSODEG00000013256	SRL	100	80.932	Octodon_degus
ENSATEG00000024315	srl	100	96.687	ENSONIG00000005192	srl	100	96.687	Oreochromis_niloticus
ENSATEG00000024315	srl	94	75.169	ENSORLG00000015064	SRL	97	75.000	Oryzias_latipes
ENSATEG00000024315	srl	100	95.652	ENSORLG00000008291	srl	97	95.652	Oryzias_latipes
ENSATEG00000024315	srl	94	75.395	ENSORLG00020018173	SRL	97	75.225	Oryzias_latipes_hni
ENSATEG00000024315	srl	100	96.066	ENSORLG00020019784	srl	85	96.066	Oryzias_latipes_hni
ENSATEG00000024315	srl	94	75.395	ENSORLG00015019063	SRL	97	75.225	Oryzias_latipes_hsok
ENSATEG00000024315	srl	100	95.652	ENSORLG00015009342	srl	97	95.652	Oryzias_latipes_hsok
ENSATEG00000024315	srl	94	73.904	ENSOMEG00000005682	SRL	53	74.179	Oryzias_melastigma
ENSATEG00000024315	srl	100	95.445	ENSOMEG00000010006	srl	100	95.445	Oryzias_melastigma
ENSATEG00000024315	srl	96	82.018	ENSOGAG00000029266	SRL	54	83.333	Otolemur_garnettii
ENSATEG00000024315	srl	99	81.075	ENSOARG00000003074	SRL	58	81.075	Ovis_aries
ENSATEG00000024315	srl	97	81.538	ENSPPAG00000024919	-	99	83.488	Pan_paniscus
ENSATEG00000024315	srl	100	79.281	ENSPPRG00000010274	SRL	99	83.256	Panthera_pardus
ENSATEG00000024315	srl	100	79.281	ENSPTIG00000015162	SRL	99	83.256	Panthera_tigris_altaica
ENSATEG00000024315	srl	97	81.538	ENSPTRG00000007712	SRL	99	83.488	Pan_troglodytes
ENSATEG00000024315	srl	97	81.223	ENSPANG00000013804	SRL	98	81.223	Papio_anubis
ENSATEG00000024315	srl	100	78.769	ENSPKIG00000024974	SRL	94	78.769	Paramormyrops_kingsleyae
ENSATEG00000024315	srl	100	91.152	ENSPKIG00000006405	srl	100	90.722	Paramormyrops_kingsleyae
ENSATEG00000024315	srl	99	80.728	ENSPSIG00000008586	SRL	50	83.973	Pelodiscus_sinensis
ENSATEG00000024315	srl	97	93.450	ENSPMGG00000021081	srl	96	95.506	Periophthalmus_magnuspinnatus
ENSATEG00000024315	srl	94	75.566	ENSPMGG00000023505	-	100	75.395	Periophthalmus_magnuspinnatus
ENSATEG00000024315	srl	97	82.418	ENSPEMG00000015842	Srl	100	80.932	Peromyscus_maniculatus_bairdii
ENSATEG00000024315	srl	89	68.879	ENSPMAG00000004786	srl	99	68.879	Petromyzon_marinus
ENSATEG00000024315	srl	96	82.705	ENSPCIG00000012128	SRL	96	83.900	Phascolarctos_cinereus
ENSATEG00000024315	srl	100	95.238	ENSPFOG00000011408	srl	98	93.711	Poecilia_formosa
ENSATEG00000024315	srl	95	76.392	ENSPLAG00000002932	SRL	99	77.027	Poecilia_latipinna
ENSATEG00000024315	srl	97	94.771	ENSPLAG00000008017	srl	99	94.771	Poecilia_latipinna
ENSATEG00000024315	srl	97	74.573	ENSPMEG00000005890	SRL	61	74.145	Poecilia_mexicana
ENSATEG00000024315	srl	100	95.117	ENSPMEG00000006745	srl	99	94.771	Poecilia_mexicana
ENSATEG00000024315	srl	100	95.238	ENSPREG00000007751	srl	99	96.413	Poecilia_reticulata
ENSATEG00000024315	srl	97	75.641	ENSPREG00000000315	SRL	99	77.928	Poecilia_reticulata
ENSATEG00000024315	srl	89	84.964	ENSPPYG00000007053	SRL	98	84.964	Pongo_abelii
ENSATEG00000024315	srl	96	82.418	ENSPCAG00000003378	-	50	84.127	Procavia_capensis
ENSATEG00000024315	srl	97	81.878	ENSPCOG00000023135	SRL	99	84.419	Propithecus_coquereli
ENSATEG00000024315	srl	96	82.340	ENSPVAG00000006586	SRL	54	83.710	Pteropus_vampyrus
ENSATEG00000024315	srl	100	96.480	ENSPNYG00000001200	srl	100	96.480	Pundamilia_nyererei
ENSATEG00000024315	srl	97	73.718	ENSPNYG00000003423	SRL	58	73.718	Pundamilia_nyererei
ENSATEG00000024315	srl	100	91.925	ENSPNAG00000023106	srl	100	91.925	Pygocentrus_nattereri
ENSATEG00000024315	srl	94	75.737	ENSPNAG00000007361	-	91	75.737	Pygocentrus_nattereri
ENSATEG00000024315	srl	94	83.258	ENSSBOG00000029273	SRL	100	79.704	Saimiri_boliviensis_boliviensis
ENSATEG00000024315	srl	100	91.736	ENSSFOG00015009773	srl	100	91.736	Scleropages_formosus
ENSATEG00000024315	srl	100	95.754	ENSSMAG00000016274	srl	100	95.754	Scophthalmus_maximus
ENSATEG00000024315	srl	94	75.165	ENSSMAG00000002232	SRL	50	75.165	Scophthalmus_maximus
ENSATEG00000024315	srl	94	97.748	ENSSDUG00000010808	srl	98	97.748	Seriola_dumerili
ENSATEG00000024315	srl	94	77.111	ENSSDUG00000009161	SRL	99	77.111	Seriola_dumerili
ENSATEG00000024315	srl	94	76.856	ENSSLDG00000014601	SRL	100	77.412	Seriola_lalandi_dorsalis
ENSATEG00000024315	srl	100	96.273	ENSSLDG00000022024	srl	100	96.273	Seriola_lalandi_dorsalis
ENSATEG00000024315	srl	96	82.965	ENSSPUG00000016859	SRL	98	83.820	Sphenodon_punctatus
ENSATEG00000024315	srl	100	97.727	ENSSPAG00000019105	srl	100	97.727	Stegastes_partitus
ENSATEG00000024315	srl	94	78.685	ENSSPAG00000014254	SRL	98	78.685	Stegastes_partitus
ENSATEG00000024315	srl	96	81.579	ENSSSCG00000007949	SRL	98	83.447	Sus_scrofa
ENSATEG00000024315	srl	93	83.864	ENSTGUG00000003951	-	97	83.864	Taeniopygia_guttata
ENSATEG00000024315	srl	77	86.188	ENSTGUG00000016121	-	100	86.188	Taeniopygia_guttata
ENSATEG00000024315	srl	89	78.759	ENSTRUG00000013310	SRL	55	78.759	Takifugu_rubripes
ENSATEG00000024315	srl	100	96.178	ENSTRUG00000006005	srl	100	96.178	Takifugu_rubripes
ENSATEG00000024315	srl	100	96.178	ENSTNIG00000009739	srl	100	96.178	Tetraodon_nigroviridis
ENSATEG00000024315	srl	94	83.032	ENSUAMG00000005701	SRL	55	83.032	Ursus_americanus
ENSATEG00000024315	srl	94	83.032	ENSUMAG00000002574	SRL	55	83.032	Ursus_maritimus
ENSATEG00000024315	srl	99	79.318	ENSXETG00000017313	srl	98	82.393	Xenopus_tropicalis
ENSATEG00000024315	srl	96	77.556	ENSXCOG00000014584	SRL	98	78.153	Xiphophorus_couchianus
ENSATEG00000024315	srl	89	95.962	ENSXCOG00000010424	srl	97	95.962	Xiphophorus_couchianus
ENSATEG00000024315	srl	97	74.786	ENSXMAG00000027598	SRL	64	74.786	Xiphophorus_maculatus
ENSATEG00000024315	srl	100	95.031	ENSXMAG00000004625	srl	95	95.031	Xiphophorus_maculatus