EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000024492 (Gene tree)
Gene ID: -
Gene Symbol: znf407
Alias: si:ch73-173g15.1
Full Name: zinc finger protein 407
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 126807 bases
Position: chrOOHO01000006.1:38015078-38141884
Accession: ZDB-GENE-110411-123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000035642	zf-C2H2	PF00096.26	9.7e-19	1	3
ENSATEP00000035642	zf-C2H2	PF00096.26	9.7e-19	2	3
ENSATEP00000035642	zf-C2H2	PF00096.26	9.7e-19	3	3
ENSATEP00000035642	zf-met	PF12874.7	8.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000036155	-	1908	-	ENSATEP00000035642	636 (aa)	-	-

Gene Model

Click here to download ENSATEG00000024492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000024492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000024492	znf407	64	33.846	ENSATEG00000015695	-	92	33.846
ENSATEG00000024492	znf407	58	35.227	ENSATEG00000008761	-	56	35.227
ENSATEG00000024492	znf407	63	34.677	ENSATEG00000010560	-	86	34.677
ENSATEG00000024492	znf407	61	33.645	ENSATEG00000014684	-	87	36.111
ENSATEG00000024492	znf407	55	38.194	ENSATEG00000007658	-	72	35.632
ENSATEG00000024492	znf407	58	36.066	ENSATEG00000011235	-	59	36.066
ENSATEG00000024492	znf407	60	30.081	ENSATEG00000022839	ZNF319	86	30.081
ENSATEG00000024492	znf407	62	36.313	ENSATEG00000005519	-	94	35.673
ENSATEG00000024492	znf407	64	33.846	ENSATEG00000017618	-	92	33.846
ENSATEG00000024492	znf407	60	30.935	ENSATEG00000023044	-	87	31.515
ENSATEG00000024492	znf407	61	30.303	ENSATEG00000015206	znf646	57	30.303
ENSATEG00000024492	znf407	60	34.529	ENSATEG00000018051	-	97	34.529
ENSATEG00000024492	znf407	61	32.039	ENSATEG00000020665	-	52	32.039
ENSATEG00000024492	znf407	59	35.928	ENSATEG00000018195	-	87	35.928
ENSATEG00000024492	znf407	62	33.544	ENSATEG00000022064	-	98	30.172
ENSATEG00000024492	znf407	54	31.102	ENSATEG00000007325	-	81	31.102
ENSATEG00000024492	znf407	63	39.000	ENSATEG00000024503	znf236	67	39.000
ENSATEG00000024492	znf407	67	31.673	ENSATEG00000001815	-	75	32.778
ENSATEG00000024492	znf407	63	39.216	ENSATEG00000014239	-	94	36.321
ENSATEG00000024492	znf407	59	30.859	ENSATEG00000018374	GZF1	88	33.019
ENSATEG00000024492	znf407	63	38.251	ENSATEG00000002726	-	75	33.884
ENSATEG00000024492	znf407	60	30.888	ENSATEG00000009436	-	82	30.888
ENSATEG00000024492	znf407	60	34.375	ENSATEG00000019026	gfi1aa	54	34.375
ENSATEG00000024492	znf407	59	35.000	ENSATEG00000008683	si:ch211-241b2.1	68	35.000
ENSATEG00000024492	znf407	59	33.712	ENSATEG00000003344	-	67	39.873
ENSATEG00000024492	znf407	59	39.175	ENSATEG00000008320	-	87	39.175
ENSATEG00000024492	znf407	60	30.398	ENSATEG00000013829	prdm5	66	30.398
ENSATEG00000024492	znf407	58	35.025	ENSATEG00000010859	-	87	35.025
ENSATEG00000024492	znf407	60	32.184	ENSATEG00000002534	gfi1b	52	32.184
ENSATEG00000024492	znf407	59	38.265	ENSATEG00000004127	-	90	38.265
ENSATEG00000024492	znf407	61	30.986	ENSATEG00000022022	-	91	30.986
ENSATEG00000024492	znf407	63	32.381	ENSATEG00000000589	znf652	79	32.381
ENSATEG00000024492	znf407	62	35.185	ENSATEG00000018931	-	80	35.185
ENSATEG00000024492	znf407	59	31.907	ENSATEG00000015238	-	62	36.893
ENSATEG00000024492	znf407	55	35.326	ENSATEG00000008649	-	56	35.326

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000024492	znf407	98	91.667	ENSAPOG00000004966	znf407	99	92.788	Acanthochromis_polyacanthus
ENSATEG00000024492	znf407	89	93.662	ENSACIG00000014233	znf407	100	93.662	Amphilophus_citrinellus
ENSATEG00000024492	znf407	99	90.881	ENSAOCG00000010173	znf407	99	92.453	Amphiprion_ocellaris
ENSATEG00000024492	znf407	99	90.723	ENSAPEG00000018919	znf407	99	92.296	Amphiprion_percula
ENSATEG00000024492	znf407	89	92.416	ENSACLG00000022191	znf407	99	94.004	Astatotilapia_calliptera
ENSATEG00000024492	znf407	100	73.979	ENSDARG00000087536	znf407	93	87.500	Danio_rerio
ENSATEG00000024492	znf407	99	76.730	ENSELUG00000020080	znf407	55	78.179	Esox_lucius
ENSATEG00000024492	znf407	100	83.359	ENSSPAG00000016199	znf407	100	87.284	Stegastes_partitus