EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000024559 (Gene tree)
Gene ID: 113169709
Gene Symbol: plecb
Alias: si:ch211-24c14.1
Full Name: plectin-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 85980 bases
Position: chrOOHO01000006.1:38850465-38936444
Accession: 113169709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000035756	S10_plectin	PF03501.15	7.9e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000036245	-	13706	-	ENSATEP00000035732	4564 (aa)	-	-
ENSATET00000036291	-	13514	-	ENSATEP00000035778	4490 (aa)	-	-
ENSATET00000036252	-	13770	-	ENSATEP00000035739	4497 (aa)	XP_026227118	UPI000E462EAE
ENSATET00000036284	-	13619	-	ENSATEP00000035771	4515 (aa)	-	-
ENSATET00000036269	-	17355	XM_026371325	ENSATEP00000035756	5643 (aa)	XP_026227110	UPI000E4617A1
ENSATET00000036295	-	14001	-	ENSATEP00000035782	4521 (aa)	XP_026227113	UPI000E45D600
ENSATET00000036274	-	13588	-	ENSATEP00000035761	4487 (aa)	-	-

Gene Model

Click here to download ENSATEG00000024559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000024559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000024559	plecb	99	80.934	ENSACLG00000022613	plecb	99	80.745	Astatotilapia_calliptera
ENSATEG00000024559	plecb	95	83.455	ENSCVAG00000013972	plecb	92	83.374	Cyprinodon_variegatus
ENSATEG00000024559	plecb	100	71.416	ENSELUG00000020803	plecb	99	71.501	Esox_lucius
ENSATEG00000024559	plecb	82	80.298	ENSGMOG00000006545	plecb	99	80.499	Gadus_morhua
ENSATEG00000024559	plecb	82	85.737	ENSGACG00000005431	plecb	99	85.861	Gasterosteus_aculeatus
ENSATEG00000024559	plecb	87	75.419	ENSIPUG00000020055	plecb	87	75.440	Ictalurus_punctatus
ENSATEG00000024559	plecb	82	86.568	ENSKMAG00000003609	plecb	99	86.680	Kryptolebias_marmoratus
ENSATEG00000024559	plecb	100	79.800	ENSLBEG00000004779	plecb	100	80.704	Labrus_bergylta
ENSATEG00000024559	plecb	100	83.050	ENSMAMG00000001487	plecb	100	83.155	Mastacembelus_armatus
ENSATEG00000024559	plecb	82	71.319	ENSONIG00000013803	pleca	99	71.451	Oreochromis_niloticus
ENSATEG00000024559	plecb	95	80.074	ENSORLG00000023311	plecb	97	80.066	Oryzias_latipes
ENSATEG00000024559	plecb	95	80.584	ENSORLG00020001716	plecb	96	80.559	Oryzias_latipes_hni
ENSATEG00000024559	plecb	95	79.946	ENSORLG00015017959	plecb	97	79.938	Oryzias_latipes_hsok
ENSATEG00000024559	plecb	99	76.945	ENSOMEG00000011949	plecb	99	76.767	Oryzias_melastigma
ENSATEG00000024559	plecb	82	72.274	ENSPKIG00000014989	pleca	89	72.463	Paramormyrops_kingsleyae
ENSATEG00000024559	plecb	100	77.457	ENSPMEG00000014762	plecb	99	77.729	Poecilia_mexicana
ENSATEG00000024559	plecb	99	77.754	ENSPREG00000014625	plecb	99	77.594	Poecilia_reticulata
ENSATEG00000024559	plecb	99	71.003	ENSPNAG00000001581	plecb	84	77.457	Pygocentrus_nattereri
ENSATEG00000024559	plecb	100	82.182	ENSSMAG00000007821	plecb	100	82.199	Scophthalmus_maximus
ENSATEG00000024559	plecb	100	77.561	ENSTRUG00000003715	plecb	100	77.526	Takifugu_rubripes