EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Orthologs

Description

Ensembl ID: ENSBTAG00000000098 (Gene tree)
Gene ID: 100138100
Gene Symbol: SETDB1
Alias: -
Full Name: Bos taurus SET domain bifurcated 1 (SETDB1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 32304 bases
Position: chr3:19801955-19834258
Accession: NM_001191388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000000107	MBD	PF01429.19	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000000107	-	4655	XM_005203829	ENSBTAP00000000107	1290 (aa)	XP_005203886	E1BKH5

Gene Model

Click here to download ENSBTAG00000000098's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta00310	Lysine degradation	KEGG
bta04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000098	SETDB1	100	96.365	ENSG00000143379	SETDB1	100	96.365	Homo_sapiens
ENSBTAG00000000098	SETDB1	56	62.381	ENSAPOG00000016228	setdb1b	99	69.832	Acanthochromis_polyacanthus
ENSBTAG00000000098	SETDB1	100	95.381	ENSAMEG00000001160	SETDB1	100	95.381	Ailuropoda_melanoleuca
ENSBTAG00000000098	SETDB1	91	71.751	ENSACIG00000007359	setdb1b	99	71.751	Amphilophus_citrinellus
ENSBTAG00000000098	SETDB1	89	66.495	ENSAOCG00000005586	setdb1b	99	66.495	Amphiprion_ocellaris
ENSBTAG00000000098	SETDB1	82	67.904	ENSAPEG00000007774	setdb1b	99	66.495	Amphiprion_percula
ENSBTAG00000000098	SETDB1	92	63.333	ENSATEG00000023520	setdb1b	99	70.391	Anabas_testudineus
ENSBTAG00000000098	SETDB1	99	76.506	ENSAPLG00000013908	SETDB1	100	76.201	Anas_platyrhynchos
ENSBTAG00000000098	SETDB1	100	96.597	ENSANAG00000001819	SETDB1	100	96.597	Aotus_nancymaae
ENSBTAG00000000098	SETDB1	88	71.348	ENSACLG00000020489	setdb1b	97	71.910	Astatotilapia_calliptera
ENSBTAG00000000098	SETDB1	55	58.491	ENSAMXG00000010030	setdb1a	69	58.491	Astyanax_mexicanus
ENSBTAG00000000098	SETDB1	90	59.866	ENSAMXG00000016168	setdb1b	81	75.000	Astyanax_mexicanus
ENSBTAG00000000098	SETDB1	100	95.988	ENSCJAG00000006972	SETDB1	100	95.988	Callithrix_jacchus
ENSBTAG00000000098	SETDB1	100	96.059	ENSCAFG00000023501	SETDB1	100	96.059	Canis_familiaris
ENSBTAG00000000098	SETDB1	100	96.136	ENSCAFG00020013596	SETDB1	100	96.136	Canis_lupus_dingo
ENSBTAG00000000098	SETDB1	100	98.837	ENSCHIG00000010698	SETDB1	100	98.837	Capra_hircus
ENSBTAG00000000098	SETDB1	81	94.914	ENSTSYG00000012646	SETDB1	100	94.626	Carlito_syrichta
ENSBTAG00000000098	SETDB1	78	93.952	ENSCAPG00000013619	SETDB1	100	80.287	Cavia_aperea
ENSBTAG00000000098	SETDB1	100	94.818	ENSCPOG00000001632	SETDB1	100	94.818	Cavia_porcellus
ENSBTAG00000000098	SETDB1	100	96.142	ENSCCAG00000024882	SETDB1	100	96.142	Cebus_capucinus
ENSBTAG00000000098	SETDB1	100	92.658	ENSCATG00000044888	SETDB1	100	92.658	Cercocebus_atys
ENSBTAG00000000098	SETDB1	100	94.457	ENSCLAG00000000242	SETDB1	100	94.765	Chinchilla_lanigera
ENSBTAG00000000098	SETDB1	88	96.579	ENSCSAG00000018034	SETDB1	100	96.579	Chlorocebus_sabaeus
ENSBTAG00000000098	SETDB1	100	86.124	ENSCHOG00000004013	SETDB1	100	86.124	Choloepus_hoffmanni
ENSBTAG00000000098	SETDB1	99	79.112	ENSCPBG00000008716	SETDB1	100	79.036	Chrysemys_picta_bellii
ENSBTAG00000000098	SETDB1	87	97.166	ENSCANG00000036388	SETDB1	98	93.231	Colobus_angolensis_palliatus
ENSBTAG00000000098	SETDB1	100	92.093	ENSCGRG00001010822	Setdb1	100	91.860	Cricetulus_griseus_chok1gshd
ENSBTAG00000000098	SETDB1	100	91.783	ENSCGRG00000005953	Setdb1	100	91.550	Cricetulus_griseus_crigri
ENSBTAG00000000098	SETDB1	87	70.225	ENSCSEG00000002988	setdb1b	98	71.348	Cynoglossus_semilaevis
ENSBTAG00000000098	SETDB1	89	70.652	ENSCVAG00000008877	setdb1b	99	70.652	Cyprinodon_variegatus
ENSBTAG00000000098	SETDB1	94	58.083	ENSDARG00000099021	setdb1b	99	56.497	Danio_rerio
ENSBTAG00000000098	SETDB1	100	96.068	ENSDNOG00000007754	SETDB1	100	96.068	Dasypus_novemcinctus
ENSBTAG00000000098	SETDB1	100	92.438	ENSDORG00000006830	Setdb1	100	92.593	Dipodomys_ordii
ENSBTAG00000000098	SETDB1	70	46.564	ENSEBUG00000005735	setdb1b	95	46.341	Eptatretus_burgeri
ENSBTAG00000000098	SETDB1	100	96.536	ENSEASG00005002061	SETDB1	100	96.536	Equus_asinus_asinus
ENSBTAG00000000098	SETDB1	100	96.613	ENSECAG00000023954	SETDB1	100	96.613	Equus_caballus
ENSBTAG00000000098	SETDB1	83	94.958	ENSEEUG00000015825	SETDB1	83	94.958	Erinaceus_europaeus
ENSBTAG00000000098	SETDB1	87	77.108	ENSELUG00000013948	setdb1b	98	77.108	Esox_lucius
ENSBTAG00000000098	SETDB1	69	53.453	ENSELUG00000006204	-	74	69.149	Esox_lucius
ENSBTAG00000000098	SETDB1	100	93.726	ENSFCAG00000009655	SETDB1	100	94.113	Felis_catus
ENSBTAG00000000098	SETDB1	100	95.131	ENSFDAG00000021515	SETDB1	100	95.054	Fukomys_damarensis
ENSBTAG00000000098	SETDB1	89	68.852	ENSFHEG00000022195	setdb1b	99	69.945	Fundulus_heteroclitus
ENSBTAG00000000098	SETDB1	87	80.368	ENSGMOG00000005993	setdb1b	92	80.368	Gadus_morhua
ENSBTAG00000000098	SETDB1	99	74.904	ENSGALG00000024051	SETDB1	92	73.916	Gallus_gallus
ENSBTAG00000000098	SETDB1	91	60.690	ENSGAFG00000012805	setdb1b	99	62.937	Gambusia_affinis
ENSBTAG00000000098	SETDB1	87	74.545	ENSGACG00000011675	setdb1b	93	75.758	Gasterosteus_aculeatus
ENSBTAG00000000098	SETDB1	99	79.419	ENSGAGG00000005348	SETDB1	100	79.342	Gopherus_agassizii
ENSBTAG00000000098	SETDB1	100	96.520	ENSGGOG00000016308	SETDB1	100	96.520	Gorilla_gorilla
ENSBTAG00000000098	SETDB1	88	71.348	ENSHBUG00000004618	setdb1b	97	71.910	Haplochromis_burtoni
ENSBTAG00000000098	SETDB1	100	94.741	ENSHGLG00000011098	SETDB1	100	94.818	Heterocephalus_glaber_female
ENSBTAG00000000098	SETDB1	100	93.813	ENSHGLG00100009789	SETDB1	100	93.890	Heterocephalus_glaber_male
ENSBTAG00000000098	SETDB1	89	69.663	ENSHCOG00000014567	setdb1b	97	70.225	Hippocampus_comes
ENSBTAG00000000098	SETDB1	87	73.684	ENSIPUG00000004536	setdb1	97	72.159	Ictalurus_punctatus
ENSBTAG00000000098	SETDB1	100	94.457	ENSSTOG00000006770	SETDB1	100	94.457	Ictidomys_tridecemlineatus
ENSBTAG00000000098	SETDB1	88	68.852	ENSKMAG00000001197	setdb1b	99	69.399	Kryptolebias_marmoratus
ENSBTAG00000000098	SETDB1	88	68.539	ENSLBEG00000025862	setdb1b	95	69.101	Labrus_bergylta
ENSBTAG00000000098	SETDB1	99	69.683	ENSLACG00000011159	SETDB1	100	69.306	Latimeria_chalumnae
ENSBTAG00000000098	SETDB1	100	94.113	ENSLAFG00000004006	SETDB1	100	94.190	Loxodonta_africana
ENSBTAG00000000098	SETDB1	100	96.288	ENSMFAG00000042328	SETDB1	100	96.288	Macaca_fascicularis
ENSBTAG00000000098	SETDB1	100	96.365	ENSMMUG00000023235	SETDB1	100	96.365	Macaca_mulatta
ENSBTAG00000000098	SETDB1	100	96.210	ENSMNEG00000017223	SETDB1	100	96.210	Macaca_nemestrina
ENSBTAG00000000098	SETDB1	100	96.288	ENSMLEG00000033050	SETDB1	100	96.288	Mandrillus_leucophaeus
ENSBTAG00000000098	SETDB1	92	70.520	ENSMAMG00000015176	setdb1b	86	71.098	Mastacembelus_armatus
ENSBTAG00000000098	SETDB1	88	71.348	ENSMZEG00005016099	setdb1b	97	71.910	Maylandia_zebra
ENSBTAG00000000098	SETDB1	87	71.937	ENSMGAG00000001018	SETDB1	97	70.798	Meleagris_gallopavo
ENSBTAG00000000098	SETDB1	88	93.028	ENSMAUG00000021391	Setdb1	100	92.741	Mesocricetus_auratus
ENSBTAG00000000098	SETDB1	100	96.222	ENSMICG00000000425	SETDB1	100	96.222	Microcebus_murinus
ENSBTAG00000000098	SETDB1	100	91.462	ENSMOCG00000017407	Setdb1	100	91.615	Microtus_ochrogaster
ENSBTAG00000000098	SETDB1	87	70.556	ENSMMOG00000016162	setdb1b	98	70.556	Mola_mola
ENSBTAG00000000098	SETDB1	99	88.300	ENSMODG00000018821	SETDB1	90	88.144	Monodelphis_domestica
ENSBTAG00000000098	SETDB1	66	62.514	ENSMALG00000007801	setdb1b	98	75.460	Monopterus_albus
ENSBTAG00000000098	SETDB1	100	91.208	MGP_CAROLIEiJ_G0025342	Setdb1	100	90.902	Mus_caroli
ENSBTAG00000000098	SETDB1	100	90.465	ENSMUSG00000015697	Setdb1	100	90.313	Mus_musculus
ENSBTAG00000000098	SETDB1	100	90.520	ENSMPUG00000004298	SETDB1	100	90.979	Mustela_putorius_furo
ENSBTAG00000000098	SETDB1	100	92.640	ENSMLUG00000010486	SETDB1	100	92.489	Myotis_lucifugus
ENSBTAG00000000098	SETDB1	100	91.163	ENSNGAG00000020151	Setdb1	100	91.395	Nannospalax_galili
ENSBTAG00000000098	SETDB1	95	58.045	ENSNBRG00000003147	setdb1b	98	72.472	Neolamprologus_brichardi
ENSBTAG00000000098	SETDB1	100	92.824	ENSNLEG00000009996	SETDB1	100	92.824	Nomascus_leucogenys
ENSBTAG00000000098	SETDB1	88	87.879	ENSMEUG00000006544	-	87	88.934	Notamacropus_eugenii
ENSBTAG00000000098	SETDB1	100	80.062	ENSMEUG00000000555	-	100	80.294	Notamacropus_eugenii
ENSBTAG00000000098	SETDB1	97	92.271	ENSOPRG00000015349	SETDB1	100	92.669	Ochotona_princeps
ENSBTAG00000000098	SETDB1	100	94.818	ENSODEG00000012471	SETDB1	100	94.818	Octodon_degus
ENSBTAG00000000098	SETDB1	87	71.348	ENSONIG00000006454	setdb1b	97	71.910	Oreochromis_niloticus
ENSBTAG00000000098	SETDB1	100	94.059	ENSOCUG00000003642	SETDB1	100	94.367	Oryctolagus_cuniculus
ENSBTAG00000000098	SETDB1	95	65.347	ENSORLG00000010602	setdb1b	99	67.526	Oryzias_latipes
ENSBTAG00000000098	SETDB1	59	81.402	ENSORLG00020008638	setdb1b	97	61.154	Oryzias_latipes_hni
ENSBTAG00000000098	SETDB1	95	63.768	ENSORLG00015014543	setdb1b	99	65.829	Oryzias_latipes_hsok
ENSBTAG00000000098	SETDB1	95	65.672	ENSOMEG00000009457	setdb1b	99	68.750	Oryzias_melastigma
ENSBTAG00000000098	SETDB1	100	89.258	ENSOGAG00000010320	SETDB1	100	89.181	Otolemur_garnettii
ENSBTAG00000000098	SETDB1	100	98.533	ENSOARG00000020880	SETDB1	100	98.533	Ovis_aries
ENSBTAG00000000098	SETDB1	100	96.288	ENSPPAG00000041015	SETDB1	100	96.288	Pan_paniscus
ENSBTAG00000000098	SETDB1	100	95.585	ENSPPRG00000005462	SETDB1	100	95.662	Panthera_pardus
ENSBTAG00000000098	SETDB1	100	94.655	ENSPTIG00000014233	SETDB1	100	94.888	Panthera_tigris_altaica
ENSBTAG00000000098	SETDB1	100	96.288	ENSPTRG00000001267	SETDB1	100	96.288	Pan_troglodytes
ENSBTAG00000000098	SETDB1	100	93.658	ENSPANG00000020214	SETDB1	100	93.813	Papio_anubis
ENSBTAG00000000098	SETDB1	98	56.669	ENSPKIG00000010963	setdb1b	100	56.863	Paramormyrops_kingsleyae
ENSBTAG00000000098	SETDB1	57	79.459	ENSPSIG00000008407	SETDB1	85	79.459	Pelodiscus_sinensis
ENSBTAG00000000098	SETDB1	93	92.940	ENSPEMG00000010553	Setdb1	100	92.691	Peromyscus_maniculatus_bairdii
ENSBTAG00000000098	SETDB1	98	51.916	ENSPMAG00000001573	setdb1b	100	51.284	Petromyzon_marinus
ENSBTAG00000000098	SETDB1	99	57.025	ENSPFOG00000004623	-	98	57.318	Poecilia_formosa
ENSBTAG00000000098	SETDB1	92	63.415	ENSPFOG00000004429	setdb1b	98	71.910	Poecilia_formosa
ENSBTAG00000000098	SETDB1	94	69.613	ENSPLAG00000019076	-	99	70.718	Poecilia_latipinna
ENSBTAG00000000098	SETDB1	91	62.937	ENSPLAG00000017117	setdb1b	99	64.336	Poecilia_latipinna
ENSBTAG00000000098	SETDB1	94	69.613	ENSPMEG00000006468	setdb1b	99	70.718	Poecilia_mexicana
ENSBTAG00000000098	SETDB1	94	69.613	ENSPREG00000017459	setdb1b	99	70.166	Poecilia_reticulata
ENSBTAG00000000098	SETDB1	100	96.288	ENSPPYG00000000887	SETDB1	100	96.288	Pongo_abelii
ENSBTAG00000000098	SETDB1	85	93.557	ENSPCAG00000002527	SETDB1	100	93.557	Procavia_capensis
ENSBTAG00000000098	SETDB1	100	96.288	ENSPCOG00000027869	SETDB1	100	96.288	Propithecus_coquereli
ENSBTAG00000000098	SETDB1	94	92.220	ENSPVAG00000004355	SETDB1	93	92.531	Pteropus_vampyrus
ENSBTAG00000000098	SETDB1	87	71.348	ENSPNYG00000003997	setdb1b	97	71.910	Pundamilia_nyererei
ENSBTAG00000000098	SETDB1	77	58.228	ENSPNAG00000003444	setdb1a	63	58.228	Pygocentrus_nattereri
ENSBTAG00000000098	SETDB1	80	66.383	ENSPNAG00000021617	setdb1b	89	70.556	Pygocentrus_nattereri
ENSBTAG00000000098	SETDB1	100	90.728	ENSRNOG00000021143	Setdb1	100	90.575	Rattus_norvegicus
ENSBTAG00000000098	SETDB1	100	96.365	ENSRBIG00000042359	SETDB1	100	96.365	Rhinopithecus_bieti
ENSBTAG00000000098	SETDB1	100	96.520	ENSRROG00000032628	SETDB1	100	96.520	Rhinopithecus_roxellana
ENSBTAG00000000098	SETDB1	100	96.151	ENSSBOG00000028608	SETDB1	100	96.151	Saimiri_boliviensis_boliviensis
ENSBTAG00000000098	SETDB1	100	86.744	ENSSHAG00000012701	SETDB1	100	86.744	Sarcophilus_harrisii
ENSBTAG00000000098	SETDB1	89	68.844	ENSSFOG00015022183	setdb1	96	76.744	Scleropages_formosus
ENSBTAG00000000098	SETDB1	54	61.009	ENSSMAG00000015398	setdb1b	99	65.174	Scophthalmus_maximus
ENSBTAG00000000098	SETDB1	92	64.455	ENSSDUG00000007513	setdb1b	99	68.229	Seriola_dumerili
ENSBTAG00000000098	SETDB1	92	64.455	ENSSLDG00000015209	setdb1b	99	68.557	Seriola_lalandi_dorsalis
ENSBTAG00000000098	SETDB1	99	77.043	ENSSPUG00000002969	SETDB1	100	76.165	Sphenodon_punctatus
ENSBTAG00000000098	SETDB1	100	96.594	ENSSSCG00000006645	SETDB1	100	96.752	Sus_scrofa
ENSBTAG00000000098	SETDB1	94	73.616	ENSTGUG00000004684	SETDB1	100	72.816	Taeniopygia_guttata
ENSBTAG00000000098	SETDB1	92	61.611	ENSTRUG00000014641	setdb1b	96	68.333	Takifugu_rubripes
ENSBTAG00000000098	SETDB1	99	54.009	ENSTNIG00000008065	setdb1b	99	55.598	Tetraodon_nigroviridis
ENSBTAG00000000098	SETDB1	93	95.092	ENSTBEG00000009306	SETDB1	100	95.258	Tupaia_belangeri
ENSBTAG00000000098	SETDB1	89	96.493	ENSTTRG00000006966	SETDB1	89	96.493	Tursiops_truncatus
ENSBTAG00000000098	SETDB1	100	94.846	ENSUAMG00000026724	SETDB1	100	95.231	Ursus_americanus
ENSBTAG00000000098	SETDB1	100	91.298	ENSUMAG00000003141	SETDB1	100	91.523	Ursus_maritimus
ENSBTAG00000000098	SETDB1	74	97.126	ENSVPAG00000005440	SETDB1	78	97.126	Vicugna_pacos
ENSBTAG00000000098	SETDB1	100	95.981	ENSVVUG00000011637	SETDB1	100	95.981	Vulpes_vulpes
ENSBTAG00000000098	SETDB1	99	69.542	ENSXETG00000008936	setdb1	99	69.160	Xenopus_tropicalis
ENSBTAG00000000098	SETDB1	98	56.162	ENSXCOG00000019497	setdb1b	89	74.706	Xiphophorus_couchianus
ENSBTAG00000000098	SETDB1	94	69.613	ENSXMAG00000016600	setdb1b	99	70.166	Xiphophorus_maculatus