EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000000152 (Gene tree)
Gene ID: 785768
Gene Symbol: RANBP2
Alias: -
Full Name: Bos taurus RAN binding protein 2 (RANBP2)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 61925 bases
Position: chr11:44646703-44708627
Accession: NM_174592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000042908	zf-RanBP	PF00641.18	1.3e-37	1	5
ENSBTAP00000042908	zf-RanBP	PF00641.18	1.3e-37	2	5
ENSBTAP00000042908	zf-RanBP	PF00641.18	1.3e-37	3	5
ENSBTAP00000042908	zf-RanBP	PF00641.18	1.3e-37	4	5
ENSBTAP00000042908	zf-RanBP	PF00641.18	1.3e-37	5	5
ENSBTAP00000060769	zf-RanBP	PF00641.18	1.4e-37	1	5
ENSBTAP00000060769	zf-RanBP	PF00641.18	1.4e-37	2	5
ENSBTAP00000060769	zf-RanBP	PF00641.18	1.4e-37	3	5
ENSBTAP00000060769	zf-RanBP	PF00641.18	1.4e-37	4	5
ENSBTAP00000060769	zf-RanBP	PF00641.18	1.4e-37	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000045527	-	10000	XM_010810003	ENSBTAP00000042908	3035 (aa)	XP_010808305	F1MXS1
ENSBTAT00000068436	-	9325	XM_005212703	ENSBTAP00000060769	3061 (aa)	XP_005212760	UPI0003840753

Gene Model

Click here to download ENSBTAG00000000152's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000152's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000152	RANBP2	100	81.780	ENSG00000153201	RANBP2	100	81.601	Homo_sapiens
ENSBTAG00000000152	RANBP2	100	51.467	ENSAPOG00000017146	si:ch1073-55a19.2	100	51.641	Acanthochromis_polyacanthus
ENSBTAG00000000152	RANBP2	99	80.350	ENSAMEG00000013078	RANBP2	100	79.825	Ailuropoda_melanoleuca
ENSBTAG00000000152	RANBP2	100	50.820	ENSACIG00000001203	si:ch1073-55a19.2	100	55.680	Amphilophus_citrinellus
ENSBTAG00000000152	RANBP2	100	51.853	ENSAPEG00000012495	si:ch1073-55a19.2	100	51.932	Amphiprion_percula
ENSBTAG00000000152	RANBP2	100	56.058	ENSATEG00000001716	si:ch1073-55a19.2	100	51.620	Anabas_testudineus
ENSBTAG00000000152	RANBP2	95	62.805	ENSACAG00000002091	RANBP2	100	63.615	Anolis_carolinensis
ENSBTAG00000000152	RANBP2	100	81.099	ENSANAG00000023124	RANBP2	100	81.003	Aotus_nancymaae
ENSBTAG00000000152	RANBP2	100	51.756	ENSACLG00000020500	si:ch1073-55a19.2	100	51.758	Astatotilapia_calliptera
ENSBTAG00000000152	RANBP2	100	82.008	ENSCJAG00000001189	RANBP2	100	81.949	Callithrix_jacchus
ENSBTAG00000000152	RANBP2	100	79.820	ENSCAFG00000023061	RANBP2	100	79.820	Canis_familiaris
ENSBTAG00000000152	RANBP2	100	85.332	ENSCAFG00020009314	RANBP2	100	82.754	Canis_lupus_dingo
ENSBTAG00000000152	RANBP2	100	97.199	ENSCHIG00000012686	RANBP2	100	96.804	Capra_hircus
ENSBTAG00000000152	RANBP2	99	80.453	ENSTSYG00000001656	RANBP2	100	80.291	Carlito_syrichta
ENSBTAG00000000152	RANBP2	99	74.902	ENSCAPG00000010687	RANBP2	100	74.836	Cavia_aperea
ENSBTAG00000000152	RANBP2	100	79.145	ENSCPOG00000000392	RANBP2	100	76.968	Cavia_porcellus
ENSBTAG00000000152	RANBP2	100	81.183	ENSCCAG00000028166	RANBP2	100	81.004	Cebus_capucinus
ENSBTAG00000000152	RANBP2	100	82.367	ENSCATG00000032597	RANBP2	100	82.188	Cercocebus_atys
ENSBTAG00000000152	RANBP2	100	80.379	ENSCLAG00000010533	RANBP2	100	78.919	Chinchilla_lanigera
ENSBTAG00000000152	RANBP2	100	82.188	ENSCSAG00000017019	RANBP2	100	82.008	Chlorocebus_sabaeus
ENSBTAG00000000152	RANBP2	65	93.117	ENSCHOG00000012659	-	60	93.117	Choloepus_hoffmanni
ENSBTAG00000000152	RANBP2	100	69.036	ENSCPBG00000006985	RANBP2	100	68.824	Chrysemys_picta_bellii
ENSBTAG00000000152	RANBP2	97	82.645	ENSCANG00000041469	RANBP2	100	82.645	Colobus_angolensis_palliatus
ENSBTAG00000000152	RANBP2	100	81.670	ENSCGRG00001000642	Ranbp2	100	79.692	Cricetulus_griseus_chok1gshd
ENSBTAG00000000152	RANBP2	100	81.311	ENSCGRG00000008995	Ranbp2	100	78.995	Cricetulus_griseus_crigri
ENSBTAG00000000152	RANBP2	100	48.220	ENSCSEG00000013280	si:ch1073-55a19.2	100	48.684	Cynoglossus_semilaevis
ENSBTAG00000000152	RANBP2	97	56.752	ENSCVAG00000016050	si:ch1073-55a19.2	100	50.330	Cyprinodon_variegatus
ENSBTAG00000000152	RANBP2	60	49.660	ENSDARG00000093125	RANBP2	100	49.681	Danio_rerio
ENSBTAG00000000152	RANBP2	100	79.143	ENSDNOG00000040501	RANBP2	100	79.143	Dasypus_novemcinctus
ENSBTAG00000000152	RANBP2	100	82.142	ENSDORG00000002206	Ranbp2	100	81.422	Dipodomys_ordii
ENSBTAG00000000152	RANBP2	74	81.754	ENSETEG00000008891	-	68	81.287	Echinops_telfairi
ENSBTAG00000000152	RANBP2	98	55.128	ENSEBUG00000010057	si:ch1073-55a19.2	84	55.128	Eptatretus_burgeri
ENSBTAG00000000152	RANBP2	100	84.638	ENSEASG00005012918	RANBP2	100	81.952	Equus_asinus_asinus
ENSBTAG00000000152	RANBP2	97	91.111	ENSECAG00000008458	RANBP2	96	91.111	Equus_caballus
ENSBTAG00000000152	RANBP2	82	91.923	ENSEEUG00000007806	RANBP2	79	91.923	Erinaceus_europaeus
ENSBTAG00000000152	RANBP2	98	64.663	ENSELUG00000007763	si:ch1073-55a19.2	91	64.904	Esox_lucius
ENSBTAG00000000152	RANBP2	99	65.261	ENSFALG00000003519	RANBP2	99	63.714	Ficedula_albicollis
ENSBTAG00000000152	RANBP2	100	78.333	ENSFDAG00000016912	RANBP2	55	74.722	Fukomys_damarensis
ENSBTAG00000000152	RANBP2	96	55.878	ENSFHEG00000009774	si:ch1073-55a19.2	100	55.521	Fundulus_heteroclitus
ENSBTAG00000000152	RANBP2	98	69.565	ENSGMOG00000007071	si:ch1073-55a19.2	94	69.565	Gadus_morhua
ENSBTAG00000000152	RANBP2	100	57.096	ENSGAFG00000010966	si:ch1073-55a19.2	100	56.731	Gambusia_affinis
ENSBTAG00000000152	RANBP2	100	50.953	ENSGACG00000006831	si:ch1073-55a19.2	100	50.921	Gasterosteus_aculeatus
ENSBTAG00000000152	RANBP2	95	66.081	ENSGAGG00000025039	RANBP2	99	65.661	Gopherus_agassizii
ENSBTAG00000000152	RANBP2	100	51.647	ENSHBUG00000000053	si:ch1073-55a19.2	100	51.649	Haplochromis_burtoni
ENSBTAG00000000152	RANBP2	100	79.857	ENSHGLG00000018887	RANBP2	100	78.203	Heterocephalus_glaber_female
ENSBTAG00000000152	RANBP2	100	79.237	ENSHGLG00100007365	RANBP2	100	77.015	Heterocephalus_glaber_male
ENSBTAG00000000152	RANBP2	100	48.324	ENSHCOG00000019596	si:ch1073-55a19.2	100	48.444	Hippocampus_comes
ENSBTAG00000000152	RANBP2	100	48.333	ENSIPUG00000019614	si:ch1073-55a19.2	100	57.447	Ictalurus_punctatus
ENSBTAG00000000152	RANBP2	100	82.516	ENSSTOG00000019518	RANBP2	100	79.820	Ictidomys_tridecemlineatus
ENSBTAG00000000152	RANBP2	100	82.426	ENSJJAG00000021292	Ranbp2	100	82.230	Jaculus_jaculus
ENSBTAG00000000152	RANBP2	100	55.040	ENSKMAG00000001158	si:ch1073-55a19.2	100	55.040	Kryptolebias_marmoratus
ENSBTAG00000000152	RANBP2	94	52.866	ENSLBEG00000027979	si:ch1073-55a19.2	99	52.866	Labrus_bergylta
ENSBTAG00000000152	RANBP2	100	58.176	ENSLACG00000009728	RANBP2	100	57.734	Latimeria_chalumnae
ENSBTAG00000000152	RANBP2	97	58.794	ENSLOCG00000010333	si:ch1073-55a19.2	100	54.137	Lepisosteus_oculatus
ENSBTAG00000000152	RANBP2	100	82.636	ENSLAFG00000000740	RANBP2	54	78.162	Loxodonta_africana
ENSBTAG00000000152	RANBP2	100	82.307	ENSMFAG00000029029	RANBP2	100	82.128	Macaca_fascicularis
ENSBTAG00000000152	RANBP2	100	82.367	ENSMMUG00000021019	RANBP2	100	82.188	Macaca_mulatta
ENSBTAG00000000152	RANBP2	100	82.307	ENSMNEG00000043706	RANBP2	100	82.128	Macaca_nemestrina
ENSBTAG00000000152	RANBP2	99	80.758	ENSMLEG00000037350	RANBP2	99	80.577	Mandrillus_leucophaeus
ENSBTAG00000000152	RANBP2	100	53.978	ENSMAMG00000017900	si:ch1073-55a19.2	100	54.688	Mastacembelus_armatus
ENSBTAG00000000152	RANBP2	100	51.725	ENSMZEG00005010956	si:ch1073-55a19.2	100	51.790	Maylandia_zebra
ENSBTAG00000000152	RANBP2	99	62.316	ENSMGAG00000014831	-	99	61.856	Meleagris_gallopavo
ENSBTAG00000000152	RANBP2	100	82.224	ENSMAUG00000013313	Ranbp2	100	80.548	Mesocricetus_auratus
ENSBTAG00000000152	RANBP2	100	81.422	ENSMICG00000011864	RANBP2	100	81.004	Microcebus_murinus
ENSBTAG00000000152	RANBP2	100	82.127	ENSMOCG00000012516	Ranbp2	100	80.322	Microtus_ochrogaster
ENSBTAG00000000152	RANBP2	100	53.890	ENSMMOG00000005743	si:ch1073-55a19.2	100	53.645	Mola_mola
ENSBTAG00000000152	RANBP2	98	81.773	ENSMODG00000002914	RANBP2	100	81.773	Monodelphis_domestica
ENSBTAG00000000152	RANBP2	100	50.730	ENSMALG00000004359	si:ch1073-55a19.2	100	50.543	Monopterus_albus
ENSBTAG00000000152	RANBP2	100	81.226	ENSMUSG00000003226	Ranbp2	100	78.878	Mus_musculus
ENSBTAG00000000152	RANBP2	100	81.167	MGP_PahariEiJ_G0030751	Ranbp2	100	78.717	Mus_pahari
ENSBTAG00000000152	RANBP2	100	81.291	MGP_SPRETEiJ_G0016147	Ranbp2	100	78.942	Mus_spretus
ENSBTAG00000000152	RANBP2	100	83.814	ENSMPUG00000010754	RANBP2	100	83.568	Mustela_putorius_furo
ENSBTAG00000000152	RANBP2	99	81.956	ENSMLUG00000005555	RANBP2	100	81.652	Myotis_lucifugus
ENSBTAG00000000152	RANBP2	100	80.826	ENSNGAG00000016154	Ranbp2	100	80.517	Nannospalax_galili
ENSBTAG00000000152	RANBP2	100	51.525	ENSNBRG00000004587	si:ch1073-55a19.2	100	51.776	Neolamprologus_brichardi
ENSBTAG00000000152	RANBP2	99	79.321	ENSNLEG00000007501	RANBP2	99	79.261	Nomascus_leucogenys
ENSBTAG00000000152	RANBP2	92	86.156	ENSOPRG00000009720	-	94	86.156	Ochotona_princeps
ENSBTAG00000000152	RANBP2	100	78.994	ENSODEG00000013212	RANBP2	100	77.753	Octodon_degus
ENSBTAG00000000152	RANBP2	100	52.265	ENSONIG00000004346	si:ch1073-55a19.2	100	52.199	Oreochromis_niloticus
ENSBTAG00000000152	RANBP2	79	68.153	ENSOANG00000004894	RANBP2	100	68.519	Ornithorhynchus_anatinus
ENSBTAG00000000152	RANBP2	100	81.055	ENSOCUG00000001165	RANBP2	100	80.894	Oryctolagus_cuniculus
ENSBTAG00000000152	RANBP2	100	51.422	ENSORLG00000015523	si:ch1073-55a19.2	100	56.180	Oryzias_latipes
ENSBTAG00000000152	RANBP2	100	56.585	ENSORLG00020003797	si:ch1073-55a19.2	100	56.585	Oryzias_latipes_hni
ENSBTAG00000000152	RANBP2	100	50.662	ENSORLG00015004994	si:ch1073-55a19.2	100	56.340	Oryzias_latipes_hsok
ENSBTAG00000000152	RANBP2	100	55.519	ENSOMEG00000022969	si:ch1073-55a19.2	100	55.360	Oryzias_melastigma
ENSBTAG00000000152	RANBP2	100	83.160	ENSOGAG00000028976	RANBP2	100	80.379	Otolemur_garnettii
ENSBTAG00000000152	RANBP2	99	97.584	ENSOARG00000000558	RANBP2	100	97.584	Ovis_aries
ENSBTAG00000000152	RANBP2	100	82.367	ENSPANG00000000990	RANBP2	100	82.188	Papio_anubis
ENSBTAG00000000152	RANBP2	93	51.923	ENSPKIG00000021054	-	56	51.923	Paramormyrops_kingsleyae
ENSBTAG00000000152	RANBP2	100	52.488	ENSPKIG00000010971	RANBP2	100	52.340	Paramormyrops_kingsleyae
ENSBTAG00000000152	RANBP2	99	69.430	ENSPSIG00000007182	RANBP2	99	69.332	Pelodiscus_sinensis
ENSBTAG00000000152	RANBP2	93	87.863	ENSPEMG00000021565	Ranbp2	99	81.579	Peromyscus_maniculatus_bairdii
ENSBTAG00000000152	RANBP2	83	56.522	ENSPMAG00000007195	si:ch1073-55a19.2	100	61.314	Petromyzon_marinus
ENSBTAG00000000152	RANBP2	100	75.610	ENSPCIG00000013912	RANBP2	100	74.034	Phascolarctos_cinereus
ENSBTAG00000000152	RANBP2	100	49.907	ENSPFOG00000007377	si:ch1073-55a19.2	100	50.000	Poecilia_formosa
ENSBTAG00000000152	RANBP2	100	50.125	ENSPLAG00000012373	si:ch1073-55a19.2	100	49.922	Poecilia_latipinna
ENSBTAG00000000152	RANBP2	97	57.353	ENSPMEG00000005561	si:ch1073-55a19.2	100	49.518	Poecilia_mexicana
ENSBTAG00000000152	RANBP2	100	56.093	ENSPREG00000013331	si:ch1073-55a19.2	100	54.104	Poecilia_reticulata
ENSBTAG00000000152	RANBP2	53	80.861	ENSPPYG00000029793	-	99	81.877	Pongo_abelii
ENSBTAG00000000152	RANBP2	71	79.484	ENSPPYG00000012139	-	100	79.355	Pongo_abelii
ENSBTAG00000000152	RANBP2	97	76.078	ENSPCAG00000000957	RANBP2	98	89.905	Procavia_capensis
ENSBTAG00000000152	RANBP2	100	80.541	ENSPCOG00000008879	RANBP2	100	80.423	Propithecus_coquereli
ENSBTAG00000000152	RANBP2	98	86.720	ENSPVAG00000003883	RANBP2	94	86.720	Pteropus_vampyrus
ENSBTAG00000000152	RANBP2	100	51.680	ENSPNYG00000015971	si:ch1073-55a19.2	100	51.697	Pundamilia_nyererei
ENSBTAG00000000152	RANBP2	100	51.712	ENSPNAG00000026129	si:ch1073-55a19.2	100	51.514	Pygocentrus_nattereri
ENSBTAG00000000152	RANBP2	100	80.892	ENSRNOG00000000796	Ranbp2	100	79.291	Rattus_norvegicus
ENSBTAG00000000152	RANBP2	100	82.318	ENSRBIG00000043515	RANBP2	100	82.139	Rhinopithecus_bieti
ENSBTAG00000000152	RANBP2	100	82.307	ENSRROG00000026113	RANBP2	100	82.128	Rhinopithecus_roxellana
ENSBTAG00000000152	RANBP2	100	81.763	ENSSBOG00000035336	RANBP2	100	81.763	Saimiri_boliviensis_boliviensis
ENSBTAG00000000152	RANBP2	99	74.844	ENSSHAG00000004676	RANBP2	99	72.098	Sarcophilus_harrisii
ENSBTAG00000000152	RANBP2	100	54.412	ENSSFOG00015023201	RANBP2	100	51.503	Scleropages_formosus
ENSBTAG00000000152	RANBP2	99	54.726	ENSSFOG00015003943	-	99	54.006	Scleropages_formosus
ENSBTAG00000000152	RANBP2	100	51.469	ENSSDUG00000013160	si:ch1073-55a19.2	100	51.459	Seriola_dumerili
ENSBTAG00000000152	RANBP2	100	51.416	ENSSLDG00000023392	si:ch1073-55a19.2	100	51.433	Seriola_lalandi_dorsalis
ENSBTAG00000000152	RANBP2	91	86.055	ENSSARG00000005595	RANBP2	76	86.004	Sorex_araneus
ENSBTAG00000000152	RANBP2	100	51.518	ENSSPAG00000008000	si:ch1073-55a19.2	100	51.736	Stegastes_partitus
ENSBTAG00000000152	RANBP2	100	83.323	ENSSSCG00000008136	RANBP2	98	83.323	Sus_scrofa
ENSBTAG00000000152	RANBP2	92	68.315	ENSTGUG00000009571	RANBP2	100	68.609	Taeniopygia_guttata
ENSBTAG00000000152	RANBP2	95	91.608	ENSTTRG00000007400	RANBP2	96	91.608	Tursiops_truncatus
ENSBTAG00000000152	RANBP2	93	83.293	ENSUAMG00000020025	RANBP2	99	83.118	Ursus_americanus
ENSBTAG00000000152	RANBP2	96	80.634	ENSVPAG00000006676	RANBP2	94	80.634	Vicugna_pacos
ENSBTAG00000000152	RANBP2	100	85.841	ENSVVUG00000014899	RANBP2	100	85.775	Vulpes_vulpes
ENSBTAG00000000152	RANBP2	94	56.601	ENSXETG00000016006	ranbp2	99	56.448	Xenopus_tropicalis
ENSBTAG00000000152	RANBP2	99	55.086	ENSXCOG00000000752	si:ch1073-55a19.2	99	54.442	Xiphophorus_couchianus
ENSBTAG00000000152	RANBP2	100	53.523	ENSXMAG00000003519	si:ch1073-55a19.2	100	53.591	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000413	protein peptidyl-prolyl isomerization	-	IEA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	-	IEA	Function
GO:0005635	nuclear envelope	-	ISS	Component
GO:0005642	annulate lamellae	-	ISS	Component
GO:0005643	nuclear pore	-	ISS	Component
GO:0006457	protein folding	-	IEA	Process
GO:0015031	protein transport	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0016925	protein sumoylation	-	IEA	Process
GO:0016925	protein sumoylation	-	ISS	Process
GO:0031965	nuclear membrane	-	ISS	Component
GO:0042405	nuclear inclusion body	-	ISS	Component
GO:0044615	nuclear pore nuclear basket	-	ISS	Component
GO:0046907	intracellular transport	-	IEA	Process
GO:0051028	mRNA transport	-	IEA	Process