EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000000221 (Gene tree)
Gene ID: 537542
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 34
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 19857 bases
Position: chr28:7903182-7923038
Accession: 537542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000052119	RRM_1	PF00076.22	2.1e-28	1	2
ENSBTAP00000052119	RRM_1	PF00076.22	2.1e-28	2	2
ENSBTAP00000073053	RRM_1	PF00076.22	3.1e-25	1	2
ENSBTAP00000073053	RRM_1	PF00076.22	3.1e-25	2	2
ENSBTAP00000060321	RRM_1	PF00076.22	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000070922	-	804	-	ENSBTAP00000060321	267 (aa)	-	-
ENSBTAT00000057151	-	1926	-	ENSBTAP00000052119	428 (aa)	XP_015316422	A8NJ74
ENSBTAT00000085618	-	1842	-	ENSBTAP00000073053	400 (aa)	-	UPI000383B5A9

Gene Model

Click here to download ENSBTAG00000000221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000221	-	100	82.944	ENSAMEG00000008831	-	100	82.944	Ailuropoda_melanoleuca
ENSBTAG00000000221	-	96	70.543	ENSCAFG00020027131	-	96	67.317	Canis_lupus_dingo
ENSBTAG00000000221	-	100	96.262	ENSCHIG00000020834	-	100	96.262	Capra_hircus
ENSBTAG00000000221	-	81	83.871	ENSCHOG00000001136	-	76	83.871	Choloepus_hoffmanni
ENSBTAG00000000221	-	100	84.112	ENSEASG00005000624	-	100	84.112	Equus_asinus_asinus
ENSBTAG00000000221	-	100	80.841	ENSECAG00000013333	RBM34	100	80.841	Equus_caballus
ENSBTAG00000000221	-	96	76.744	ENSMLEG00000044363	-	89	80.516	Mandrillus_leucophaeus
ENSBTAG00000000221	-	95	80.000	ENSMICG00000016336	-	95	80.000	Microcebus_murinus
ENSBTAG00000000221	-	100	93.764	ENSOARG00000003469	-	100	93.764	Ovis_aries
ENSBTAG00000000221	-	96	67.050	ENSPCAG00000003851	-	100	69.461	Procavia_capensis
ENSBTAG00000000221	-	100	52.336	ENSSARG00000011935	-	100	52.336	Sorex_araneus
ENSBTAG00000000221	-	100	78.555	ENSTTRG00000002216	-	100	78.555	Tursiops_truncatus
ENSBTAG00000000221	-	95	83.088	ENSUAMG00000007077	-	99	82.944	Ursus_americanus
ENSBTAG00000000221	-	95	83.333	ENSUMAG00000006867	-	99	83.178	Ursus_maritimus
ENSBTAG00000000221	-	100	72.897	ENSVVUG00000007919	-	100	72.897	Vulpes_vulpes