EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000000278 (Gene tree)
Gene ID: -
Gene Symbol: RNF17
Alias: -
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 38117 bases
Position: chr12:36524815-36562931
Accession: 34035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000000345	TUDOR	PF00567.24	1.9e-49	1	3
ENSBTAP00000000345	TUDOR	PF00567.24	1.9e-49	2	3
ENSBTAP00000000345	TUDOR	PF00567.24	1.9e-49	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000000345	-	1899	-	ENSBTAP00000000345	632 (aa)	-	E1BFJ4

Gene Model

Click here to download ENSBTAG00000000278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000000278	RNF17	99	33.333	ENSBTAG00000006855	TDRD1	63	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000278	RNF17	100	84.044	ENSG00000132972	RNF17	100	84.044	Homo_sapiens
ENSBTAG00000000278	RNF17	87	34.435	ENSAPOG00000017034	rnf17	58	34.851	Acanthochromis_polyacanthus
ENSBTAG00000000278	RNF17	100	84.273	ENSAMEG00000017340	RNF17	50	84.273	Ailuropoda_melanoleuca
ENSBTAG00000000278	RNF17	98	39.706	ENSAOCG00000018283	rnf17	55	35.552	Amphiprion_ocellaris
ENSBTAG00000000278	RNF17	87	35.223	ENSATEG00000002067	rnf17	56	35.223	Anabas_testudineus
ENSBTAG00000000278	RNF17	100	49.188	ENSAPLG00000003969	RNF17	57	49.188	Anas_platyrhynchos
ENSBTAG00000000278	RNF17	95	73.970	ENSANAG00000029969	RNF17	96	74.135	Aotus_nancymaae
ENSBTAG00000000278	RNF17	100	83.254	ENSCJAG00000018937	RNF17	100	83.254	Callithrix_jacchus
ENSBTAG00000000278	RNF17	95	83.876	ENSCAFG00000007418	RNF17	53	83.876	Canis_familiaris
ENSBTAG00000000278	RNF17	100	87.342	ENSCAFG00020002919	-	100	87.342	Canis_lupus_dingo
ENSBTAG00000000278	RNF17	100	97.785	ENSCHIG00000026716	RNF17	100	97.785	Capra_hircus
ENSBTAG00000000278	RNF17	100	81.890	ENSTSYG00000000365	RNF17	99	81.890	Carlito_syrichta
ENSBTAG00000000278	RNF17	100	60.000	ENSCAPG00000012908	RNF17	57	60.000	Cavia_aperea
ENSBTAG00000000278	RNF17	100	83.886	ENSCCAG00000026725	RNF17	99	83.886	Cebus_capucinus
ENSBTAG00000000278	RNF17	100	84.518	ENSCATG00000040352	RNF17	100	84.518	Cercocebus_atys
ENSBTAG00000000278	RNF17	100	78.635	ENSCLAG00000004127	RNF17	51	78.635	Chinchilla_lanigera
ENSBTAG00000000278	RNF17	100	79.259	ENSCSAG00000018019	RNF17	55	79.259	Chlorocebus_sabaeus
ENSBTAG00000000278	RNF17	100	57.353	ENSCPBG00000020920	RNF17	65	57.353	Chrysemys_picta_bellii
ENSBTAG00000000278	RNF17	99	84.335	ENSCANG00000032927	RNF17	99	84.335	Colobus_angolensis_palliatus
ENSBTAG00000000278	RNF17	100	77.893	ENSCGRG00001022658	Rnf17	53	77.893	Cricetulus_griseus_chok1gshd
ENSBTAG00000000278	RNF17	100	77.893	ENSCGRG00000009924	Rnf17	53	77.893	Cricetulus_griseus_crigri
ENSBTAG00000000278	RNF17	98	33.681	ENSDARG00000056387	rnf17	54	33.681	Danio_rerio
ENSBTAG00000000278	RNF17	100	86.392	ENSEASG00005001421	-	100	86.392	Equus_asinus_asinus
ENSBTAG00000000278	RNF17	100	84.421	ENSECAG00000017152	RNF17	52	84.421	Equus_caballus
ENSBTAG00000000278	RNF17	100	90.190	ENSFCAG00000004914	RNF17	100	90.190	Felis_catus
ENSBTAG00000000278	RNF17	100	47.951	ENSFALG00000008766	RNF17	63	47.951	Ficedula_albicollis
ENSBTAG00000000278	RNF17	99	33.926	ENSFHEG00000014822	rnf17	55	34.320	Fundulus_heteroclitus
ENSBTAG00000000278	RNF17	69	39.130	ENSGMOG00000015560	-	65	39.130	Gadus_morhua
ENSBTAG00000000278	RNF17	100	49.219	ENSGALG00000045414	-	100	49.688	Gallus_gallus
ENSBTAG00000000278	RNF17	100	84.518	ENSGGOG00000014491	RNF17	100	84.518	Gorilla_gorilla
ENSBTAG00000000278	RNF17	98	35.757	ENSHBUG00000003554	rnf17	55	35.757	Haplochromis_burtoni
ENSBTAG00000000278	RNF17	100	76.855	ENSHGLG00000007270	RNF17	50	76.855	Heterocephalus_glaber_female
ENSBTAG00000000278	RNF17	100	76.855	ENSHGLG00100017393	RNF17	51	76.855	Heterocephalus_glaber_male
ENSBTAG00000000278	RNF17	100	80.727	ENSSTOG00000011255	-	100	80.727	Ictidomys_tridecemlineatus
ENSBTAG00000000278	RNF17	100	78.338	ENSJJAG00000016584	Rnf17	59	78.338	Jaculus_jaculus
ENSBTAG00000000278	RNF17	99	34.757	ENSKMAG00000013403	rnf17	55	35.052	Kryptolebias_marmoratus
ENSBTAG00000000278	RNF17	83	32.812	ENSLBEG00000014910	rnf17	51	32.812	Labrus_bergylta
ENSBTAG00000000278	RNF17	99	52.756	ENSLACG00000000323	RNF17	68	52.756	Latimeria_chalumnae
ENSBTAG00000000278	RNF17	100	84.360	ENSMFAG00000032388	RNF17	100	84.360	Macaca_fascicularis
ENSBTAG00000000278	RNF17	100	84.360	ENSMMUG00000014610	RNF17	100	84.360	Macaca_mulatta
ENSBTAG00000000278	RNF17	100	84.202	ENSMNEG00000011234	RNF17	100	84.202	Macaca_nemestrina
ENSBTAG00000000278	RNF17	100	82.911	ENSMLEG00000030227	RNF17	56	82.911	Mandrillus_leucophaeus
ENSBTAG00000000278	RNF17	99	35.503	ENSMZEG00005019166	rnf17	55	35.503	Maylandia_zebra
ENSBTAG00000000278	RNF17	100	47.647	ENSMGAG00000015138	RNF17	66	47.647	Meleagris_gallopavo
ENSBTAG00000000278	RNF17	100	88.291	ENSMICG00000010364	RNF17	100	88.291	Microcebus_murinus
ENSBTAG00000000278	RNF17	100	75.668	ENSMOCG00000011818	-	77	75.668	Microtus_ochrogaster
ENSBTAG00000000278	RNF17	100	67.953	ENSMODG00000007827	RNF17	54	67.953	Monodelphis_domestica
ENSBTAG00000000278	RNF17	87	41.176	ENSMALG00000016943	rnf17	54	41.176	Monopterus_albus
ENSBTAG00000000278	RNF17	100	77.300	MGP_CAROLIEiJ_G0019337	Rnf17	59	77.300	Mus_caroli
ENSBTAG00000000278	RNF17	100	76.855	ENSMUSG00000000365	Rnf17	59	76.855	Mus_musculus
ENSBTAG00000000278	RNF17	100	77.003	MGP_PahariEiJ_G0030355	Rnf17	53	77.003	Mus_pahari
ENSBTAG00000000278	RNF17	100	76.855	MGP_SPRETEiJ_G0020228	Rnf17	59	76.855	Mus_spretus
ENSBTAG00000000278	RNF17	100	76.409	ENSNGAG00000013553	Rnf17	53	76.409	Nannospalax_galili
ENSBTAG00000000278	RNF17	99	34.446	ENSNBRG00000012006	rnf17	50	34.446	Neolamprologus_brichardi
ENSBTAG00000000278	RNF17	100	83.728	ENSNLEG00000013780	RNF17	100	83.728	Nomascus_leucogenys
ENSBTAG00000000278	RNF17	100	75.633	ENSODEG00000005443	-	100	75.633	Octodon_degus
ENSBTAG00000000278	RNF17	99	41.176	ENSONIG00000015746	rnf17	67	35.111	Oreochromis_niloticus
ENSBTAG00000000278	RNF17	100	81.009	ENSOCUG00000007384	RNF17	53	81.009	Oryctolagus_cuniculus
ENSBTAG00000000278	RNF17	98	35.660	ENSORLG00000012818	rnf17	67	35.660	Oryzias_latipes
ENSBTAG00000000278	RNF17	98	35.812	ENSORLG00020009879	-	59	35.812	Oryzias_latipes_hni
ENSBTAG00000000278	RNF17	98	35.812	ENSORLG00015013027	-	59	35.812	Oryzias_latipes_hsok
ENSBTAG00000000278	RNF17	88	34.347	ENSOMEG00000009891	rnf17	67	34.347	Oryzias_melastigma
ENSBTAG00000000278	RNF17	100	81.630	ENSOGAG00000014803	RNF17	53	81.630	Otolemur_garnettii
ENSBTAG00000000278	RNF17	100	84.202	ENSPPAG00000028779	RNF17	100	84.202	Pan_paniscus
ENSBTAG00000000278	RNF17	100	90.032	ENSPPRG00000009230	RNF17	100	90.032	Panthera_pardus
ENSBTAG00000000278	RNF17	100	90.190	ENSPTIG00000001738	RNF17	100	90.190	Panthera_tigris_altaica
ENSBTAG00000000278	RNF17	100	84.044	ENSPTRG00000005713	RNF17	100	84.044	Pan_troglodytes
ENSBTAG00000000278	RNF17	100	84.518	ENSPANG00000007640	RNF17	100	84.518	Papio_anubis
ENSBTAG00000000278	RNF17	100	57.038	ENSPSIG00000011245	RNF17	82	54.499	Pelodiscus_sinensis
ENSBTAG00000000278	RNF17	100	77.596	ENSPEMG00000008693	Rnf17	53	77.596	Peromyscus_maniculatus_bairdii
ENSBTAG00000000278	RNF17	88	70.822	ENSPCIG00000009190	-	55	70.822	Phascolarctos_cinereus
ENSBTAG00000000278	RNF17	98	35.000	ENSPFOG00000007124	rnf17	55	35.111	Poecilia_formosa
ENSBTAG00000000278	RNF17	98	35.347	ENSPMEG00000022432	rnf17	55	35.347	Poecilia_mexicana
ENSBTAG00000000278	RNF17	100	79.111	ENSPPYG00000005215	RNF17	55	79.111	Pongo_abelii
ENSBTAG00000000278	RNF17	100	63.297	ENSPCOG00000020211	RNF17	100	63.297	Propithecus_coquereli
ENSBTAG00000000278	RNF17	99	33.883	ENSPNAG00000027505	rnf17	74	34.033	Pygocentrus_nattereri
ENSBTAG00000000278	RNF17	100	78.338	ENSRNOG00000008059	Rnf17	55	78.338	Rattus_norvegicus
ENSBTAG00000000278	RNF17	100	83.886	ENSRBIG00000027010	RNF17	56	82.278	Rhinopithecus_bieti
ENSBTAG00000000278	RNF17	100	83.886	ENSRROG00000022801	RNF17	100	83.886	Rhinopithecus_roxellana
ENSBTAG00000000278	RNF17	100	84.360	ENSSBOG00000021661	RNF17	99	84.360	Saimiri_boliviensis_boliviensis
ENSBTAG00000000278	RNF17	100	66.914	ENSSHAG00000005609	RNF17	51	66.914	Sarcophilus_harrisii
ENSBTAG00000000278	RNF17	99	36.566	ENSSFOG00015023037	rnf17	56	36.566	Scleropages_formosus
ENSBTAG00000000278	RNF17	83	32.639	ENSSMAG00000007429	rnf17	53	32.639	Scophthalmus_maximus
ENSBTAG00000000278	RNF17	98	54.116	ENSSPUG00000008917	RNF17	62	54.116	Sphenodon_punctatus
ENSBTAG00000000278	RNF17	100	81.899	ENSSSCG00000009572	RNF17	55	81.899	Sus_scrofa
ENSBTAG00000000278	RNF17	63	50.594	ENSTGUG00000011272	-	100	50.594	Taeniopygia_guttata
ENSBTAG00000000278	RNF17	80	55.975	ENSTGUG00000011267	-	66	55.975	Taeniopygia_guttata
ENSBTAG00000000278	RNF17	98	33.333	ENSTRUG00000015498	rnf17	58	33.333	Takifugu_rubripes
ENSBTAG00000000278	RNF17	98	33.687	ENSTNIG00000015681	rnf17	74	33.687	Tetraodon_nigroviridis
ENSBTAG00000000278	RNF17	100	87.975	ENSUMAG00000013953	-	100	87.975	Ursus_maritimus
ENSBTAG00000000278	RNF17	100	45.201	ENSXETG00000034020	RNF17	100	45.201	Xenopus_tropicalis
ENSBTAG00000000278	RNF17	87	35.000	ENSXCOG00000018295	rnf17	54	33.932	Xiphophorus_couchianus
ENSBTAG00000000278	RNF17	87	35.000	ENSXMAG00000014747	rnf17	55	32.982	Xiphophorus_maculatus