EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000000406 (Gene tree)
Gene ID: 768314
Gene Symbol: GPATCH4
Alias: -
Full Name: Bos taurus G-patch domain containing 4 (GPATCH4)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 8062 bases
Position: chr3:14232918-14240979
Accession: NM_001078129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000033817	G-patch	PF01585.23	2.6e-09	1	1
ENSBTAP00000065937	G-patch	PF01585.23	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000074677	-	2862	-	ENSBTAP00000065937	475 (aa)	-	-
ENSBTAT00000033914	-	1901	XM_024989776	ENSBTAP00000033817	408 (aa)	XP_024845544	Q2KJE1
ENSBTAT00000070800	-	1194	-	ENSBTAP00000071694	397 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000000406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000406	GPATCH4	85	75.214	ENSG00000160818	GPATCH4	95	92.035	Homo_sapiens
ENSBTAG00000000406	GPATCH4	63	38.768	ENSAPOG00000008436	gpatch4	80	37.231	Acanthochromis_polyacanthus
ENSBTAG00000000406	GPATCH4	95	65.891	ENSAMEG00000014829	GPATCH4	91	65.217	Ailuropoda_melanoleuca
ENSBTAG00000000406	GPATCH4	100	64.114	ENSANAG00000035354	GPATCH4	94	71.429	Aotus_nancymaae
ENSBTAG00000000406	GPATCH4	52	41.423	ENSACLG00000010456	gpatch4	58	52.000	Astatotilapia_calliptera
ENSBTAG00000000406	GPATCH4	84	72.046	ENSCJAG00000006048	GPATCH4	92	91.071	Callithrix_jacchus
ENSBTAG00000000406	GPATCH4	95	62.564	ENSCAFG00000016788	GPATCH4	87	62.564	Canis_familiaris
ENSBTAG00000000406	GPATCH4	100	91.951	ENSCHIG00000021295	GPATCH4	100	92.195	Capra_hircus
ENSBTAG00000000406	GPATCH4	84	72.989	ENSCCAG00000036114	GPATCH4	92	91.071	Cebus_capucinus
ENSBTAG00000000406	GPATCH4	95	73.350	ENSCATG00000042152	GPATCH4	82	88.889	Cercocebus_atys
ENSBTAG00000000406	GPATCH4	95	65.152	ENSCLAG00000002967	-	89	65.152	Chinchilla_lanigera
ENSBTAG00000000406	GPATCH4	95	74.177	ENSCSAG00000002161	GPATCH4	88	74.177	Chlorocebus_sabaeus
ENSBTAG00000000406	GPATCH4	82	75.367	ENSCANG00000030031	GPATCH4	97	75.581	Colobus_angolensis_palliatus
ENSBTAG00000000406	GPATCH4	98	53.901	ENSCGRG00001016898	Gpatch4	98	54.695	Cricetulus_griseus_chok1gshd
ENSBTAG00000000406	GPATCH4	85	61.254	ENSCGRG00000008399	Gpatch4	84	63.202	Cricetulus_griseus_crigri
ENSBTAG00000000406	GPATCH4	95	69.309	ENSDNOG00000034673	GPATCH4	87	69.821	Dasypus_novemcinctus
ENSBTAG00000000406	GPATCH4	96	60.202	ENSETEG00000000659	-	88	59.950	Echinops_telfairi
ENSBTAG00000000406	GPATCH4	95	69.821	ENSEASG00005018284	GPATCH4	87	70.588	Equus_asinus_asinus
ENSBTAG00000000406	GPATCH4	95	70.588	ENSECAG00000011135	GPATCH4	97	75.219	Equus_caballus
ENSBTAG00000000406	GPATCH4	100	54.382	ENSEEUG00000003221	-	82	60.434	Erinaceus_europaeus
ENSBTAG00000000406	GPATCH4	70	74.913	ENSFCAG00000006554	GPATCH4	92	67.733	Felis_catus
ENSBTAG00000000406	GPATCH4	52	43.304	ENSFHEG00000003097	gpatch4	52	47.264	Fundulus_heteroclitus
ENSBTAG00000000406	GPATCH4	50	43.519	ENSGALG00000048365	GPATCH4	51	49.189	Gallus_gallus
ENSBTAG00000000406	GPATCH4	56	39.768	ENSGAFG00000021732	gpatch4	64	44.560	Gambusia_affinis
ENSBTAG00000000406	GPATCH4	61	40.214	ENSGACG00000013318	gpatch4	60	47.000	Gasterosteus_aculeatus
ENSBTAG00000000406	GPATCH4	84	74.855	ENSGGOG00000000753	GPATCH4	82	88.889	Gorilla_gorilla
ENSBTAG00000000406	GPATCH4	52	41.423	ENSHBUG00000009675	gpatch4	58	52.000	Haplochromis_burtoni
ENSBTAG00000000406	GPATCH4	52	41.964	ENSHCOG00000007016	gpatch4	56	44.792	Hippocampus_comes
ENSBTAG00000000406	GPATCH4	93	65.375	ENSSTOG00000020510	GPATCH4	89	87.179	Ictidomys_tridecemlineatus
ENSBTAG00000000406	GPATCH4	55	41.736	ENSLBEG00000009364	-	59	48.454	Labrus_bergylta
ENSBTAG00000000406	GPATCH4	87	60.000	ENSLAFG00000028327	-	91	55.112	Loxodonta_africana
ENSBTAG00000000406	GPATCH4	85	74.785	ENSMFAG00000030965	GPATCH4	82	89.744	Macaca_fascicularis
ENSBTAG00000000406	GPATCH4	95	72.843	ENSMMUG00000002624	GPATCH4	82	88.889	Macaca_mulatta
ENSBTAG00000000406	GPATCH4	89	70.811	ENSMNEG00000028844	GPATCH4	82	88.034	Macaca_nemestrina
ENSBTAG00000000406	GPATCH4	85	74.212	ENSMLEG00000037909	GPATCH4	82	87.179	Mandrillus_leucophaeus
ENSBTAG00000000406	GPATCH4	50	42.793	ENSMZEG00005017452	gpatch4	53	44.660	Maylandia_zebra
ENSBTAG00000000406	GPATCH4	87	74.167	ENSMICG00000013624	GPATCH4	96	74.167	Microcebus_murinus
ENSBTAG00000000406	GPATCH4	52	62.441	ENSMICG00000038615	-	92	66.667	Microcebus_murinus
ENSBTAG00000000406	GPATCH4	65	57.303	ENSMODG00000016818	-	69	64.286	Monodelphis_domestica
ENSBTAG00000000406	GPATCH4	87	63.361	MGP_CAROLIEiJ_G0025152	Gpatch4	82	82.051	Mus_caroli
ENSBTAG00000000406	GPATCH4	87	61.708	ENSMUSG00000028069	Gpatch4	78	83.422	Mus_musculus
ENSBTAG00000000406	GPATCH4	86	65.000	MGP_PahariEiJ_G0026595	-	99	78.151	Mus_pahari
ENSBTAG00000000406	GPATCH4	87	61.433	MGP_SPRETEiJ_G0026093	Gpatch4	78	82.888	Mus_spretus
ENSBTAG00000000406	GPATCH4	95	64.083	ENSMPUG00000004136	-	89	64.599	Mustela_putorius_furo
ENSBTAG00000000406	GPATCH4	95	69.152	ENSMLUG00000009571	GPATCH4	87	68.205	Myotis_lucifugus
ENSBTAG00000000406	GPATCH4	84	75.145	ENSNLEG00000027678	GPATCH4	92	75.145	Nomascus_leucogenys
ENSBTAG00000000406	GPATCH4	62	52.569	ENSMEUG00000006861	-	71	58.549	Notamacropus_eugenii
ENSBTAG00000000406	GPATCH4	94	65.544	ENSOPRG00000000586	GPATCH4	86	66.581	Ochotona_princeps
ENSBTAG00000000406	GPATCH4	60	34.940	ENSOMEG00000000529	gpatch4	93	32.948	Oryzias_melastigma
ENSBTAG00000000406	GPATCH4	95	70.663	ENSOGAG00000006698	-	91	70.380	Otolemur_garnettii
ENSBTAG00000000406	GPATCH4	100	93.171	ENSOARG00000006123	GPATCH4	97	93.434	Ovis_aries
ENSBTAG00000000406	GPATCH4	88	74.380	ENSPPAG00000028364	-	82	88.889	Pan_paniscus
ENSBTAG00000000406	GPATCH4	70	73.868	ENSPPRG00000002106	GPATCH4	92	67.347	Panthera_pardus
ENSBTAG00000000406	GPATCH4	71	74.315	ENSPTIG00000006717	GPATCH4	79	88.288	Panthera_tigris_altaica
ENSBTAG00000000406	GPATCH4	88	74.380	ENSPTRG00000001464	GPATCH4	82	88.889	Pan_troglodytes
ENSBTAG00000000406	GPATCH4	85	74.785	ENSPANG00000018543	GPATCH4	82	88.889	Papio_anubis
ENSBTAG00000000406	GPATCH4	50	42.081	ENSPMAG00000009175	gpatch4	67	45.408	Petromyzon_marinus
ENSBTAG00000000406	GPATCH4	95	72.152	ENSPPYG00000000711	-	88	72.152	Pongo_abelii
ENSBTAG00000000406	GPATCH4	56	62.281	ENSPCOG00000013948	-	89	80.315	Propithecus_coquereli
ENSBTAG00000000406	GPATCH4	93	60.630	ENSPVAG00000007505	-	92	58.793	Pteropus_vampyrus
ENSBTAG00000000406	GPATCH4	52	41.423	ENSPNYG00000018461	gpatch4	85	39.103	Pundamilia_nyererei
ENSBTAG00000000406	GPATCH4	87	67.039	ENSRNOG00000018969	Gpatch4	86	67.039	Rattus_norvegicus
ENSBTAG00000000406	GPATCH4	72	79.195	ENSRBIG00000005742	GPATCH4	96	78.667	Rhinopithecus_bieti
ENSBTAG00000000406	GPATCH4	95	73.671	ENSRROG00000044157	GPATCH4	99	74.359	Rhinopithecus_roxellana
ENSBTAG00000000406	GPATCH4	100	64.523	ENSSBOG00000024840	GPATCH4	88	68.342	Saimiri_boliviensis_boliviensis
ENSBTAG00000000406	GPATCH4	79	52.469	ENSSARG00000008606	-	100	46.798	Sorex_araneus
ENSBTAG00000000406	GPATCH4	95	72.774	ENSSSCG00000006481	GPATCH4	88	71.756	Sus_scrofa
ENSBTAG00000000406	GPATCH4	95	72.093	ENSTTRG00000001113	GPATCH4	85	72.351	Tursiops_truncatus
ENSBTAG00000000406	GPATCH4	95	65.375	ENSUAMG00000013407	GPATCH4	89	65.641	Ursus_americanus
ENSBTAG00000000406	GPATCH4	95	64.858	ENSUMAG00000017797	GPATCH4	89	64.872	Ursus_maritimus
ENSBTAG00000000406	GPATCH4	95	58.473	ENSVVUG00000006004	-	88	80.672	Vulpes_vulpes
ENSBTAG00000000406	GPATCH4	50	39.316	ENSXCOG00000003911	gpatch4	53	44.444	Xiphophorus_couchianus
ENSBTAG00000000406	GPATCH4	50	38.235	ENSXMAG00000024520	gpatch4	53	44.059	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function