EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000000435 (Gene tree)
Gene ID: 514674
Gene Symbol: TARBP2
Alias: -
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 5626 bases
Position: chr5:26518832-26524457
Accession: 35602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000000558	dsrm	PF00035.26	1.3e-33	1	2
ENSBTAP00000000558	dsrm	PF00035.26	1.3e-33	2	2
ENSBTAP00000000558	DND1_DSRM	PF14709.7	8.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000000558	-	1789	XM_024991692	ENSBTAP00000000558	366 (aa)	XP_024847460	Q0IIG6

Gene Model

Click here to download ENSBTAG00000000435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000000435	TARBP2	96	44.602	ENSBTAG00000001096	PRKRA	97	44.126

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000435	TARBP2	100	97.541	ENSG00000139546	TARBP2	99	100.000	Homo_sapiens
ENSBTAG00000000435	TARBP2	100	66.120	ENSAPOG00000019892	tarbp2	100	66.393	Acanthochromis_polyacanthus
ENSBTAG00000000435	TARBP2	100	97.268	ENSAMEG00000012601	TARBP2	100	97.268	Ailuropoda_melanoleuca
ENSBTAG00000000435	TARBP2	100	65.574	ENSACIG00000016780	tarbp2	100	65.847	Amphilophus_citrinellus
ENSBTAG00000000435	TARBP2	100	65.847	ENSAOCG00000005201	tarbp2	100	66.393	Amphiprion_ocellaris
ENSBTAG00000000435	TARBP2	100	65.847	ENSAPEG00000008376	tarbp2	100	66.393	Amphiprion_percula
ENSBTAG00000000435	TARBP2	100	65.301	ENSATEG00000025012	tarbp2	100	65.574	Anabas_testudineus
ENSBTAG00000000435	TARBP2	95	77.183	ENSACAG00000001100	TARBP2	100	73.784	Anolis_carolinensis
ENSBTAG00000000435	TARBP2	100	97.541	ENSANAG00000034453	TARBP2	100	97.541	Aotus_nancymaae
ENSBTAG00000000435	TARBP2	95	66.762	ENSACLG00000018569	tarbp2	95	67.049	Astatotilapia_calliptera
ENSBTAG00000000435	TARBP2	99	65.574	ENSAMXG00000016665	tarbp2	99	65.301	Astyanax_mexicanus
ENSBTAG00000000435	TARBP2	100	97.541	ENSCJAG00000018668	TARBP2	100	97.541	Callithrix_jacchus
ENSBTAG00000000435	TARBP2	100	96.995	ENSCAFG00000006874	TARBP2	100	96.995	Canis_familiaris
ENSBTAG00000000435	TARBP2	100	98.087	ENSCAFG00020020735	TARBP2	100	98.087	Canis_lupus_dingo
ENSBTAG00000000435	TARBP2	100	95.957	ENSCHIG00000026017	TARBP2	100	95.957	Capra_hircus
ENSBTAG00000000435	TARBP2	100	96.721	ENSTSYG00000035683	TARBP2	100	96.721	Carlito_syrichta
ENSBTAG00000000435	TARBP2	61	94.222	ENSCAPG00000008981	TARBP2	100	94.222	Cavia_aperea
ENSBTAG00000000435	TARBP2	100	93.716	ENSCPOG00000001009	TARBP2	100	93.716	Cavia_porcellus
ENSBTAG00000000435	TARBP2	100	96.995	ENSCCAG00000033025	TARBP2	100	96.995	Cebus_capucinus
ENSBTAG00000000435	TARBP2	100	96.995	ENSCATG00000026344	TARBP2	100	96.995	Cercocebus_atys
ENSBTAG00000000435	TARBP2	100	93.989	ENSCLAG00000009175	TARBP2	100	93.989	Chinchilla_lanigera
ENSBTAG00000000435	TARBP2	100	96.721	ENSCSAG00000005479	TARBP2	100	96.721	Chlorocebus_sabaeus
ENSBTAG00000000435	TARBP2	100	77.049	ENSCPBG00000000654	TARBP2	100	77.391	Chrysemys_picta_bellii
ENSBTAG00000000435	TARBP2	100	96.175	ENSCANG00000040415	TARBP2	100	96.175	Colobus_angolensis_palliatus
ENSBTAG00000000435	TARBP2	100	94.536	ENSCGRG00001011856	TARBP2	100	93.169	Cricetulus_griseus_chok1gshd
ENSBTAG00000000435	TARBP2	100	94.536	ENSCGRG00000009088	TARBP2	100	93.169	Cricetulus_griseus_crigri
ENSBTAG00000000435	TARBP2	100	67.030	ENSCSEG00000010631	tarbp2	100	66.940	Cynoglossus_semilaevis
ENSBTAG00000000435	TARBP2	100	66.220	ENSCVAG00000009832	tarbp2	100	66.667	Cyprinodon_variegatus
ENSBTAG00000000435	TARBP2	100	65.847	ENSDARG00000070471	tarbp2	100	65.574	Danio_rerio
ENSBTAG00000000435	TARBP2	100	96.995	ENSDNOG00000002144	TARBP2	100	96.995	Dasypus_novemcinctus
ENSBTAG00000000435	TARBP2	86	94.248	ENSDORG00000001390	Tarbp2	100	94.248	Dipodomys_ordii
ENSBTAG00000000435	TARBP2	100	80.874	ENSETEG00000002458	TARBP2	100	80.874	Echinops_telfairi
ENSBTAG00000000435	TARBP2	95	55.172	ENSEBUG00000002377	tarbp2	96	56.598	Eptatretus_burgeri
ENSBTAG00000000435	TARBP2	100	98.634	ENSEASG00005010030	TARBP2	100	98.634	Equus_asinus_asinus
ENSBTAG00000000435	TARBP2	100	98.361	ENSECAG00000011695	TARBP2	100	98.361	Equus_caballus
ENSBTAG00000000435	TARBP2	85	85.897	ENSEEUG00000001128	-	99	85.897	Erinaceus_europaeus
ENSBTAG00000000435	TARBP2	96	67.898	ENSELUG00000010642	tarbp2	96	67.898	Esox_lucius
ENSBTAG00000000435	TARBP2	100	98.087	ENSFCAG00000007757	TARBP2	100	98.087	Felis_catus
ENSBTAG00000000435	TARBP2	100	93.443	ENSFDAG00000011932	TARBP2	100	93.852	Fukomys_damarensis
ENSBTAG00000000435	TARBP2	94	68.696	ENSFHEG00000016118	tarbp2	100	68.696	Fundulus_heteroclitus
ENSBTAG00000000435	TARBP2	100	65.405	ENSGMOG00000001290	tarbp2	100	64.721	Gadus_morhua
ENSBTAG00000000435	TARBP2	61	74.107	ENSGALG00000038939	-	84	74.107	Gallus_gallus
ENSBTAG00000000435	TARBP2	100	66.940	ENSGAFG00000013341	tarbp2	100	66.120	Gambusia_affinis
ENSBTAG00000000435	TARBP2	100	64.499	ENSGACG00000006645	tarbp2	100	65.217	Gasterosteus_aculeatus
ENSBTAG00000000435	TARBP2	100	76.230	ENSGAGG00000021169	TARBP2	100	75.956	Gopherus_agassizii
ENSBTAG00000000435	TARBP2	100	97.268	ENSGGOG00000012637	TARBP2	100	97.268	Gorilla_gorilla
ENSBTAG00000000435	TARBP2	100	64.754	ENSHBUG00000018639	tarbp2	100	65.027	Haplochromis_burtoni
ENSBTAG00000000435	TARBP2	100	93.443	ENSHGLG00000001284	TARBP2	100	93.443	Heterocephalus_glaber_female
ENSBTAG00000000435	TARBP2	100	93.443	ENSHGLG00100011274	TARBP2	100	93.443	Heterocephalus_glaber_male
ENSBTAG00000000435	TARBP2	100	65.395	ENSHCOG00000001027	tarbp2	100	64.481	Hippocampus_comes
ENSBTAG00000000435	TARBP2	100	65.426	ENSIPUG00000023701	tarbp2	100	66.396	Ictalurus_punctatus
ENSBTAG00000000435	TARBP2	100	95.902	ENSSTOG00000003678	TARBP2	100	95.902	Ictidomys_tridecemlineatus
ENSBTAG00000000435	TARBP2	100	65.574	ENSKMAG00000012142	tarbp2	100	65.574	Kryptolebias_marmoratus
ENSBTAG00000000435	TARBP2	100	66.485	ENSLBEG00000015027	tarbp2	100	66.120	Labrus_bergylta
ENSBTAG00000000435	TARBP2	72	88.889	ENSLACG00000007087	TARBP2	78	88.889	Latimeria_chalumnae
ENSBTAG00000000435	TARBP2	100	68.579	ENSLOCG00000005711	tarbp2	100	68.306	Lepisosteus_oculatus
ENSBTAG00000000435	TARBP2	77	86.268	ENSLAFG00000002620	TARBP2	100	85.563	Loxodonta_africana
ENSBTAG00000000435	TARBP2	100	96.995	ENSMFAG00000013567	TARBP2	100	96.995	Macaca_fascicularis
ENSBTAG00000000435	TARBP2	100	97.268	ENSMMUG00000018492	TARBP2	100	97.268	Macaca_mulatta
ENSBTAG00000000435	TARBP2	100	96.995	ENSMNEG00000036477	TARBP2	100	96.995	Macaca_nemestrina
ENSBTAG00000000435	TARBP2	100	96.995	ENSMLEG00000029583	TARBP2	100	96.995	Mandrillus_leucophaeus
ENSBTAG00000000435	TARBP2	96	66.667	ENSMAMG00000010272	tarbp2	97	67.622	Mastacembelus_armatus
ENSBTAG00000000435	TARBP2	100	64.754	ENSMZEG00005006895	tarbp2	100	65.027	Maylandia_zebra
ENSBTAG00000000435	TARBP2	100	94.536	ENSMAUG00000019805	Tarbp2	100	92.896	Mesocricetus_auratus
ENSBTAG00000000435	TARBP2	94	97.971	ENSMICG00000027441	TARBP2	100	97.971	Microcebus_murinus
ENSBTAG00000000435	TARBP2	100	92.623	ENSMOCG00000003691	Tarbp2	100	91.257	Microtus_ochrogaster
ENSBTAG00000000435	TARBP2	94	68.986	ENSMMOG00000010374	tarbp2	100	68.696	Mola_mola
ENSBTAG00000000435	TARBP2	100	64.674	ENSMALG00000009773	tarbp2	100	65.217	Monopterus_albus
ENSBTAG00000000435	TARBP2	100	93.443	MGP_CAROLIEiJ_G0020356	Tarbp2	100	92.896	Mus_caroli
ENSBTAG00000000435	TARBP2	100	93.443	ENSMUSG00000023051	Tarbp2	100	92.896	Mus_musculus
ENSBTAG00000000435	TARBP2	100	92.896	MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	Mus_pahari
ENSBTAG00000000435	TARBP2	100	93.443	MGP_SPRETEiJ_G0021249	Tarbp2	100	92.896	Mus_spretus
ENSBTAG00000000435	TARBP2	100	97.268	ENSMPUG00000005944	TARBP2	100	97.268	Mustela_putorius_furo
ENSBTAG00000000435	TARBP2	100	98.361	ENSMLUG00000010035	TARBP2	100	98.361	Myotis_lucifugus
ENSBTAG00000000435	TARBP2	100	97.541	ENSNLEG00000017690	TARBP2	100	97.541	Nomascus_leucogenys
ENSBTAG00000000435	TARBP2	100	82.787	ENSMEUG00000001916	TARBP2	100	82.787	Notamacropus_eugenii
ENSBTAG00000000435	TARBP2	61	94.222	ENSOPRG00000011397	TARBP2	100	94.222	Ochotona_princeps
ENSBTAG00000000435	TARBP2	62	94.690	ENSODEG00000013413	TARBP2	100	94.690	Octodon_degus
ENSBTAG00000000435	TARBP2	96	69.034	ENSONIG00000005115	tarbp2	97	67.705	Oreochromis_niloticus
ENSBTAG00000000435	TARBP2	100	93.443	ENSOCUG00000005700	TARBP2	100	93.443	Oryctolagus_cuniculus
ENSBTAG00000000435	TARBP2	100	66.120	ENSORLG00000005209	tarbp2	100	64.754	Oryzias_latipes
ENSBTAG00000000435	TARBP2	100	64.674	ENSORLG00020017755	tarbp2	100	64.481	Oryzias_latipes_hni
ENSBTAG00000000435	TARBP2	96	67.232	ENSORLG00015013237	tarbp2	100	64.754	Oryzias_latipes_hsok
ENSBTAG00000000435	TARBP2	100	64.946	ENSOMEG00000018860	tarbp2	100	63.612	Oryzias_melastigma
ENSBTAG00000000435	TARBP2	100	97.268	ENSOGAG00000001744	TARBP2	100	97.268	Otolemur_garnettii
ENSBTAG00000000435	TARBP2	100	99.180	ENSOARG00000016437	TARBP2	100	99.180	Ovis_aries
ENSBTAG00000000435	TARBP2	100	97.541	ENSPPAG00000030429	TARBP2	100	97.541	Pan_paniscus
ENSBTAG00000000435	TARBP2	100	98.087	ENSPPRG00000000189	TARBP2	100	98.087	Panthera_pardus
ENSBTAG00000000435	TARBP2	100	90.296	ENSPTIG00000007859	TARBP2	100	90.164	Panthera_tigris_altaica
ENSBTAG00000000435	TARBP2	100	97.541	ENSPTRG00000005020	TARBP2	100	97.541	Pan_troglodytes
ENSBTAG00000000435	TARBP2	100	96.995	ENSPANG00000010689	TARBP2	100	96.995	Papio_anubis
ENSBTAG00000000435	TARBP2	100	67.030	ENSPKIG00000002455	tarbp2	100	66.667	Paramormyrops_kingsleyae
ENSBTAG00000000435	TARBP2	99	66.942	ENSPMGG00000006497	tarbp2	100	66.393	Periophthalmus_magnuspinnatus
ENSBTAG00000000435	TARBP2	100	92.623	ENSPEMG00000014285	Tarbp2	100	91.257	Peromyscus_maniculatus_bairdii
ENSBTAG00000000435	TARBP2	94	59.130	ENSPMAG00000000105	tarbp2	100	57.514	Petromyzon_marinus
ENSBTAG00000000435	TARBP2	100	83.060	ENSPCIG00000006672	TARBP2	92	83.060	Phascolarctos_cinereus
ENSBTAG00000000435	TARBP2	100	67.486	ENSPFOG00000007586	tarbp2	100	66.940	Poecilia_formosa
ENSBTAG00000000435	TARBP2	100	67.486	ENSPLAG00000017659	tarbp2	100	66.393	Poecilia_latipinna
ENSBTAG00000000435	TARBP2	100	67.486	ENSPMEG00000007775	tarbp2	100	66.940	Poecilia_mexicana
ENSBTAG00000000435	TARBP2	100	67.213	ENSPREG00000007815	tarbp2	100	66.667	Poecilia_reticulata
ENSBTAG00000000435	TARBP2	100	90.710	ENSPPYG00000004583	TARBP2	100	90.710	Pongo_abelii
ENSBTAG00000000435	TARBP2	100	80.874	ENSPCAG00000005352	TARBP2	100	80.874	Procavia_capensis
ENSBTAG00000000435	TARBP2	100	98.634	ENSPCOG00000013102	TARBP2	100	98.634	Propithecus_coquereli
ENSBTAG00000000435	TARBP2	100	91.530	ENSPVAG00000012286	TARBP2	100	91.530	Pteropus_vampyrus
ENSBTAG00000000435	TARBP2	100	64.754	ENSPNYG00000014125	tarbp2	100	65.027	Pundamilia_nyererei
ENSBTAG00000000435	TARBP2	100	66.033	ENSPNAG00000011128	tarbp2	100	66.940	Pygocentrus_nattereri
ENSBTAG00000000435	TARBP2	100	91.257	ENSRNOG00000042355	Tarbp2	100	91.257	Rattus_norvegicus
ENSBTAG00000000435	TARBP2	100	96.995	ENSRBIG00000027150	TARBP2	100	96.995	Rhinopithecus_bieti
ENSBTAG00000000435	TARBP2	100	96.995	ENSRROG00000044783	TARBP2	100	97.101	Rhinopithecus_roxellana
ENSBTAG00000000435	TARBP2	100	97.268	ENSSBOG00000027305	TARBP2	100	97.268	Saimiri_boliviensis_boliviensis
ENSBTAG00000000435	TARBP2	99	84.890	ENSSHAG00000007064	TARBP2	100	84.890	Sarcophilus_harrisii
ENSBTAG00000000435	TARBP2	100	66.120	ENSSFOG00015010784	tarbp2	100	64.324	Scleropages_formosus
ENSBTAG00000000435	TARBP2	100	65.668	ENSSMAG00000012769	tarbp2	100	65.574	Scophthalmus_maximus
ENSBTAG00000000435	TARBP2	100	65.027	ENSSDUG00000018818	tarbp2	100	65.574	Seriola_dumerili
ENSBTAG00000000435	TARBP2	100	65.027	ENSSLDG00000001835	tarbp2	100	65.574	Seriola_lalandi_dorsalis
ENSBTAG00000000435	TARBP2	72	88.557	ENSSARG00000001010	TARBP2	73	88.557	Sorex_araneus
ENSBTAG00000000435	TARBP2	100	66.120	ENSSPAG00000022797	tarbp2	100	65.847	Stegastes_partitus
ENSBTAG00000000435	TARBP2	100	97.814	ENSSSCG00000000276	TARBP2	100	97.814	Sus_scrofa
ENSBTAG00000000435	TARBP2	100	66.120	ENSTRUG00000014379	tarbp2	100	65.574	Takifugu_rubripes
ENSBTAG00000000435	TARBP2	100	65.574	ENSTNIG00000007065	tarbp2	100	65.301	Tetraodon_nigroviridis
ENSBTAG00000000435	TARBP2	100	97.268	ENSTTRG00000017177	TARBP2	100	97.268	Tursiops_truncatus
ENSBTAG00000000435	TARBP2	100	97.541	ENSUAMG00000009011	TARBP2	100	97.541	Ursus_americanus
ENSBTAG00000000435	TARBP2	100	96.995	ENSUMAG00000010461	TARBP2	100	96.995	Ursus_maritimus
ENSBTAG00000000435	TARBP2	100	98.087	ENSVVUG00000028150	TARBP2	100	98.087	Vulpes_vulpes
ENSBTAG00000000435	TARBP2	97	70.752	ENSXETG00000012644	tarbp2	97	69.382	Xenopus_tropicalis
ENSBTAG00000000435	TARBP2	100	67.486	ENSXMAG00000017836	tarbp2	100	67.213	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003725	double-stranded RNA binding	-	IEA	Function
GO:0005737	cytoplasm	-	ISS	Component
GO:0007286	spermatid development	-	IEA	Process
GO:0007338	single fertilization	-	IEA	Process
GO:0016442	RISC complex	-	IEA	Component
GO:0016604	nuclear body	-	IEA	Component
GO:0019899	enzyme binding	-	IEA	Function
GO:0030422	production of siRNA involved in RNA interference	-	ISS	Process
GO:0030423	targeting of mRNA for destruction involved in RNA interference	-	ISS	Process
GO:0031054	pre-miRNA processing	-	ISS	Process
GO:0035068	micro-ribonucleoprotein complex	-	ISS	Component
GO:0035087	siRNA loading onto RISC involved in RNA interference	-	IEA	Process
GO:0035197	siRNA binding	-	ISS	Function
GO:0035198	miRNA binding	-	IEA	Function
GO:0035264	multicellular organism growth	-	IEA	Process
GO:0035280	miRNA loading onto RISC involved in gene silencing by miRNA	-	IEA	Process
GO:0042803	protein homodimerization activity	-	IEA	Function
GO:0043403	skeletal muscle tissue regeneration	-	IEA	Process
GO:0045070	positive regulation of viral genome replication	-	ISS	Process
GO:0045727	positive regulation of translation	-	IEA	Process
GO:0046782	regulation of viral transcription	-	ISS	Process
GO:0047485	protein N-terminus binding	-	IEA	Function
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component
GO:0050689	negative regulation of defense response to virus by host	-	ISS	Process
GO:0051149	positive regulation of muscle cell differentiation	-	IEA	Process
GO:0061351	neural precursor cell proliferation	-	IEA	Process
GO:0070578	RISC-loading complex	-	ISS	Component
GO:0070883	pre-miRNA binding	-	IEA	Function
GO:0090065	regulation of production of siRNA involved in RNA interference	-	IEA	Process
GO:1903798	regulation of production of miRNAs involved in gene silencing by miRNA	-	IEA	Process