EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000000439 (Gene tree)
Gene ID: 512326
Gene Symbol: SFSWAP
Alias: -
Full Name: Bos taurus splicing factor SWAP (SFSWAP)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 80986 bases
Position: chr17:45279916-45360901
Accession: NM_001192319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000073136	DRY_EERY	PF09750.9	1.2e-32	1	1
ENSBTAP00000063351	DRY_EERY	PF09750.9	1.2e-32	1	1
ENSBTAP00000000563	DRY_EERY	PF09750.9	1.3e-32	1	1
ENSBTAP00000062836	DRY_EERY	PF09750.9	1.4e-32	1	1
ENSBTAP00000073136	Surp	PF01805.20	5.8e-27	1	2
ENSBTAP00000073136	Surp	PF01805.20	5.8e-27	2	2
ENSBTAP00000063351	Surp	PF01805.20	6.1e-27	1	2
ENSBTAP00000063351	Surp	PF01805.20	6.1e-27	2	2
ENSBTAP00000000563	Surp	PF01805.20	6.4e-27	1	2
ENSBTAP00000000563	Surp	PF01805.20	6.4e-27	2	2
ENSBTAP00000062836	Surp	PF01805.20	7.4e-27	1	2
ENSBTAP00000062836	Surp	PF01805.20	7.4e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000085961	-	3234	XM_005217656	ENSBTAP00000062836	994 (aa)	XP_005217713	UPI0003841996
ENSBTAT00000071465	-	2952	-	ENSBTAP00000073136	900 (aa)	-	-
ENSBTAT00000066481	-	3003	XM_005217657	ENSBTAP00000063351	917 (aa)	XP_005217714	UPI000383CDE3
ENSBTAT00000000563	-	3188	-	ENSBTAP00000000563	942 (aa)	-	E1BKB9

Gene Model

Click here to download ENSBTAG00000000439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000439's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000439	SFSWAP	100	91.905	ENSG00000061936	SFSWAP	100	90.852	Homo_sapiens
ENSBTAG00000000439	SFSWAP	79	58.960	ENSAPOG00000005784	sfswap	69	80.952	Acanthochromis_polyacanthus
ENSBTAG00000000439	SFSWAP	100	89.101	ENSAMEG00000013818	SFSWAP	100	90.159	Ailuropoda_melanoleuca
ENSBTAG00000000439	SFSWAP	76	59.915	ENSAOCG00000016469	sfswap	86	58.978	Amphiprion_ocellaris
ENSBTAG00000000439	SFSWAP	76	60.198	ENSAPEG00000004965	sfswap	86	59.192	Amphiprion_percula
ENSBTAG00000000439	SFSWAP	81	81.818	ENSATEG00000021053	sfswap	88	56.881	Anabas_testudineus
ENSBTAG00000000439	SFSWAP	99	78.023	ENSAPLG00000013808	SFSWAP	97	79.415	Anas_platyrhynchos
ENSBTAG00000000439	SFSWAP	93	73.378	ENSACAG00000007220	SFSWAP	100	71.557	Anolis_carolinensis
ENSBTAG00000000439	SFSWAP	100	90.799	ENSANAG00000001518	SFSWAP	100	90.105	Aotus_nancymaae
ENSBTAG00000000439	SFSWAP	77	58.587	ENSACLG00000020159	sfswap	83	59.397	Astatotilapia_calliptera
ENSBTAG00000000439	SFSWAP	77	57.328	ENSAMXG00000008657	sfswap	98	54.900	Astyanax_mexicanus
ENSBTAG00000000439	SFSWAP	100	89.673	ENSCJAG00000003613	SFSWAP	100	90.174	Callithrix_jacchus
ENSBTAG00000000439	SFSWAP	100	93.228	ENSCAFG00000006625	SFSWAP	100	92.910	Canis_familiaris
ENSBTAG00000000439	SFSWAP	87	85.208	ENSCAFG00020011254	SFSWAP	99	85.363	Canis_lupus_dingo
ENSBTAG00000000439	SFSWAP	100	99.130	ENSCHIG00000008838	SFSWAP	100	98.994	Capra_hircus
ENSBTAG00000000439	SFSWAP	100	90.592	ENSTSYG00000010303	SFSWAP	100	90.401	Carlito_syrichta
ENSBTAG00000000439	SFSWAP	92	88.255	ENSCAPG00000004394	SFSWAP	96	88.369	Cavia_aperea
ENSBTAG00000000439	SFSWAP	100	88.012	ENSCPOG00000005280	SFSWAP	100	88.830	Cavia_porcellus
ENSBTAG00000000439	SFSWAP	100	90.609	ENSCCAG00000037255	SFSWAP	100	90.095	Cebus_capucinus
ENSBTAG00000000439	SFSWAP	100	91.542	ENSCATG00000031094	SFSWAP	100	90.928	Cercocebus_atys
ENSBTAG00000000439	SFSWAP	100	89.662	ENSCLAG00000008380	SFSWAP	100	89.662	Chinchilla_lanigera
ENSBTAG00000000439	SFSWAP	100	90.717	ENSCSAG00000001884	SFSWAP	100	90.928	Chlorocebus_sabaeus
ENSBTAG00000000439	SFSWAP	79	87.585	ENSCHOG00000003578	SFSWAP	91	93.750	Choloepus_hoffmanni
ENSBTAG00000000439	SFSWAP	100	75.212	ENSCPBG00000024757	SFSWAP	100	76.280	Chrysemys_picta_bellii
ENSBTAG00000000439	SFSWAP	100	91.294	ENSCANG00000036501	SFSWAP	100	90.823	Colobus_angolensis_palliatus
ENSBTAG00000000439	SFSWAP	100	88.328	ENSCGRG00001011284	Sfswap	100	88.080	Cricetulus_griseus_chok1gshd
ENSBTAG00000000439	SFSWAP	100	87.869	ENSCGRG00000017417	Sfswap	100	88.080	Cricetulus_griseus_crigri
ENSBTAG00000000439	SFSWAP	77	60.976	ENSCSEG00000003773	sfswap	84	60.345	Cynoglossus_semilaevis
ENSBTAG00000000439	SFSWAP	50	69.355	ENSCVAG00000001205	-	80	53.182	Cyprinodon_variegatus
ENSBTAG00000000439	SFSWAP	99	55.779	ENSDARG00000005980	sfswap	99	55.020	Danio_rerio
ENSBTAG00000000439	SFSWAP	100	89.895	ENSDNOG00000018742	SFSWAP	99	89.468	Dasypus_novemcinctus
ENSBTAG00000000439	SFSWAP	97	81.046	ENSDORG00000010352	Sfswap	99	81.393	Dipodomys_ordii
ENSBTAG00000000439	SFSWAP	54	46.186	FBgn0003638	su(w[a])	56	55.556	Drosophila_melanogaster
ENSBTAG00000000439	SFSWAP	84	88.000	ENSETEG00000016657	-	86	91.000	Echinops_telfairi
ENSBTAG00000000439	SFSWAP	84	38.536	ENSEBUG00000016748	SFSWAP	99	37.660	Eptatretus_burgeri
ENSBTAG00000000439	SFSWAP	100	94.774	ENSEASG00005016502	SFSWAP	100	94.074	Equus_asinus_asinus
ENSBTAG00000000439	SFSWAP	100	94.599	ENSECAG00000007657	SFSWAP	100	93.581	Equus_caballus
ENSBTAG00000000439	SFSWAP	86	75.369	ENSEEUG00000001713	SFSWAP	99	75.679	Erinaceus_europaeus
ENSBTAG00000000439	SFSWAP	59	95.918	ENSELUG00000010942	sfswap	94	56.215	Esox_lucius
ENSBTAG00000000439	SFSWAP	100	92.910	ENSFCAG00000010778	SFSWAP	100	92.910	Felis_catus
ENSBTAG00000000439	SFSWAP	100	76.812	ENSFALG00000009577	SFSWAP	96	78.896	Ficedula_albicollis
ENSBTAG00000000439	SFSWAP	100	87.920	ENSFDAG00000017235	SFSWAP	100	89.076	Fukomys_damarensis
ENSBTAG00000000439	SFSWAP	80	70.432	ENSGMOG00000009205	sfswap	76	70.764	Gadus_morhua
ENSBTAG00000000439	SFSWAP	97	78.727	ENSGALG00000002487	SFSWAP	98	78.345	Gallus_gallus
ENSBTAG00000000439	SFSWAP	83	59.669	ENSGAFG00000006272	sfswap	97	53.830	Gambusia_affinis
ENSBTAG00000000439	SFSWAP	63	87.755	ENSGACG00000017647	sfswap	99	54.557	Gasterosteus_aculeatus
ENSBTAG00000000439	SFSWAP	100	75.980	ENSGAGG00000002611	SFSWAP	100	76.575	Gopherus_agassizii
ENSBTAG00000000439	SFSWAP	100	91.781	ENSGGOG00000014877	SFSWAP	100	90.747	Gorilla_gorilla
ENSBTAG00000000439	SFSWAP	77	59.695	ENSHBUG00000005629	sfswap	82	59.483	Haplochromis_burtoni
ENSBTAG00000000439	SFSWAP	100	89.557	ENSHGLG00000019216	SFSWAP	100	89.557	Heterocephalus_glaber_female
ENSBTAG00000000439	SFSWAP	100	89.346	ENSHGLG00100019350	SFSWAP	100	89.346	Heterocephalus_glaber_male
ENSBTAG00000000439	SFSWAP	74	72.727	ENSHCOG00000009475	sfswap	77	59.420	Hippocampus_comes
ENSBTAG00000000439	SFSWAP	98	55.676	ENSIPUG00000010598	sfswap	97	56.639	Ictalurus_punctatus
ENSBTAG00000000439	SFSWAP	100	88.514	ENSSTOG00000000773	SFSWAP	100	89.357	Ictidomys_tridecemlineatus
ENSBTAG00000000439	SFSWAP	100	88.677	ENSJJAG00000006609	Sfswap	100	88.995	Jaculus_jaculus
ENSBTAG00000000439	SFSWAP	94	57.240	ENSKMAG00000013168	sfswap	86	56.812	Kryptolebias_marmoratus
ENSBTAG00000000439	SFSWAP	76	56.708	ENSLBEG00000010239	sfswap	74	58.520	Labrus_bergylta
ENSBTAG00000000439	SFSWAP	100	63.440	ENSLACG00000018678	SFSWAP	96	64.133	Latimeria_chalumnae
ENSBTAG00000000439	SFSWAP	99	60.040	ENSLOCG00000006202	sfswap	99	62.138	Lepisosteus_oculatus
ENSBTAG00000000439	SFSWAP	92	88.686	ENSLAFG00000014462	SFSWAP	100	89.257	Loxodonta_africana
ENSBTAG00000000439	SFSWAP	100	91.542	ENSMFAG00000037352	SFSWAP	100	89.900	Macaca_fascicularis
ENSBTAG00000000439	SFSWAP	100	90.612	ENSMMUG00000020343	SFSWAP	100	90.823	Macaca_mulatta
ENSBTAG00000000439	SFSWAP	100	91.418	ENSMNEG00000041002	SFSWAP	100	90.823	Macaca_nemestrina
ENSBTAG00000000439	SFSWAP	100	88.608	ENSMLEG00000035728	SFSWAP	100	88.713	Mandrillus_leucophaeus
ENSBTAG00000000439	SFSWAP	81	58.143	ENSMAMG00000006631	sfswap	97	54.073	Mastacembelus_armatus
ENSBTAG00000000439	SFSWAP	77	58.587	ENSMZEG00005017834	SFSWAP	82	59.397	Maylandia_zebra
ENSBTAG00000000439	SFSWAP	97	78.040	ENSMGAG00000002191	SFSWAP	97	77.653	Meleagris_gallopavo
ENSBTAG00000000439	SFSWAP	100	91.542	ENSMICG00000004465	SFSWAP	100	91.043	Microcebus_murinus
ENSBTAG00000000439	SFSWAP	100	87.553	ENSMOCG00000014390	Sfswap	100	87.764	Microtus_ochrogaster
ENSBTAG00000000439	SFSWAP	99	76.551	ENSMODG00000015581	SFSWAP	99	74.089	Monodelphis_domestica
ENSBTAG00000000439	SFSWAP	76	58.906	ENSMALG00000012603	sfswap	97	55.244	Monopterus_albus
ENSBTAG00000000439	SFSWAP	100	87.658	MGP_CAROLIEiJ_G0027780	Sfswap	100	87.869	Mus_caroli
ENSBTAG00000000439	SFSWAP	100	87.342	ENSMUSG00000029439	Sfswap	100	87.553	Mus_musculus
ENSBTAG00000000439	SFSWAP	100	87.066	MGP_PahariEiJ_G0024360	Sfswap	100	87.277	Mus_pahari
ENSBTAG00000000439	SFSWAP	100	87.342	MGP_SPRETEiJ_G0028779	Sfswap	100	87.553	Mus_spretus
ENSBTAG00000000439	SFSWAP	100	92.275	ENSMPUG00000002218	SFSWAP	100	92.381	Mustela_putorius_furo
ENSBTAG00000000439	SFSWAP	89	90.244	ENSMLUG00000011296	SFSWAP	100	84.530	Myotis_lucifugus
ENSBTAG00000000439	SFSWAP	100	88.397	ENSNGAG00000018167	Sfswap	100	88.608	Nannospalax_galili
ENSBTAG00000000439	SFSWAP	83	59.940	ENSNBRG00000020857	sfswap	85	58.699	Neolamprologus_brichardi
ENSBTAG00000000439	SFSWAP	100	90.186	ENSNLEG00000008386	SFSWAP	100	88.421	Nomascus_leucogenys
ENSBTAG00000000439	SFSWAP	71	86.081	ENSMEUG00000009556	-	81	86.081	Notamacropus_eugenii
ENSBTAG00000000439	SFSWAP	100	72.135	ENSOPRG00000006983	-	100	73.396	Ochotona_princeps
ENSBTAG00000000439	SFSWAP	100	88.819	ENSODEG00000008020	SFSWAP	100	88.819	Octodon_degus
ENSBTAG00000000439	SFSWAP	96	60.183	ENSONIG00000003757	sfswap	99	53.427	Oreochromis_niloticus
ENSBTAG00000000439	SFSWAP	92	84.114	ENSOANG00000013861	SFSWAP	100	84.914	Ornithorhynchus_anatinus
ENSBTAG00000000439	SFSWAP	100	84.607	ENSOCUG00000002165	SFSWAP	100	84.917	Oryctolagus_cuniculus
ENSBTAG00000000439	SFSWAP	82	57.895	ENSORLG00000010983	sfswap	83	58.345	Oryzias_latipes
ENSBTAG00000000439	SFSWAP	82	57.618	ENSORLG00020010779	sfswap	86	57.655	Oryzias_latipes_hni
ENSBTAG00000000439	SFSWAP	85	56.159	ENSORLG00015023093	sfswap	86	56.671	Oryzias_latipes_hsok
ENSBTAG00000000439	SFSWAP	80	59.775	ENSOMEG00000022065	sfswap	86	59.831	Oryzias_melastigma
ENSBTAG00000000439	SFSWAP	90	91.381	ENSOGAG00000016724	SFSWAP	99	91.381	Otolemur_garnettii
ENSBTAG00000000439	SFSWAP	100	99.129	ENSOARG00000014314	SFSWAP	100	98.411	Ovis_aries
ENSBTAG00000000439	SFSWAP	100	91.905	ENSPPAG00000036706	SFSWAP	100	90.852	Pan_paniscus
ENSBTAG00000000439	SFSWAP	100	88.323	ENSPPRG00000017318	SFSWAP	100	85.473	Panthera_pardus
ENSBTAG00000000439	SFSWAP	99	79.849	ENSPTIG00000004304	SFSWAP	99	82.565	Panthera_tigris_altaica
ENSBTAG00000000439	SFSWAP	100	91.781	ENSPTRG00000005640	SFSWAP	100	90.747	Pan_troglodytes
ENSBTAG00000000439	SFSWAP	100	91.542	ENSPANG00000019737	SFSWAP	100	90.928	Papio_anubis
ENSBTAG00000000439	SFSWAP	77	60.585	ENSPKIG00000008327	sfswap	100	55.511	Paramormyrops_kingsleyae
ENSBTAG00000000439	SFSWAP	63	73.892	ENSPSIG00000017807	SFSWAP	100	76.108	Pelodiscus_sinensis
ENSBTAG00000000439	SFSWAP	100	87.039	ENSPEMG00000001237	Sfswap	100	87.250	Peromyscus_maniculatus_bairdii
ENSBTAG00000000439	SFSWAP	51	57.451	ENSPMAG00000008279	sfswap	99	58.022	Petromyzon_marinus
ENSBTAG00000000439	SFSWAP	99	85.920	ENSPCIG00000006062	SFSWAP	99	78.916	Phascolarctos_cinereus
ENSBTAG00000000439	SFSWAP	80	60.455	ENSPFOG00000019657	sfswap	82	60.226	Poecilia_formosa
ENSBTAG00000000439	SFSWAP	80	60.597	ENSPLAG00000008513	sfswap	82	60.367	Poecilia_latipinna
ENSBTAG00000000439	SFSWAP	80	60.455	ENSPMEG00000008716	sfswap	82	60.311	Poecilia_mexicana
ENSBTAG00000000439	SFSWAP	82	58.702	ENSPREG00000006692	sfswap	84	58.791	Poecilia_reticulata
ENSBTAG00000000439	SFSWAP	98	90.032	ENSPPYG00000005129	SFSWAP	100	90.247	Pongo_abelii
ENSBTAG00000000439	SFSWAP	60	87.500	ENSPCAG00000004977	-	65	87.500	Procavia_capensis
ENSBTAG00000000439	SFSWAP	100	91.294	ENSPCOG00000023786	SFSWAP	100	90.823	Propithecus_coquereli
ENSBTAG00000000439	SFSWAP	99	90.941	ENSPVAG00000014918	SFSWAP	92	91.115	Pteropus_vampyrus
ENSBTAG00000000439	SFSWAP	77	57.895	ENSPNYG00000012660	sfswap	81	59.254	Pundamilia_nyererei
ENSBTAG00000000439	SFSWAP	82	58.056	ENSPNAG00000007073	sfswap	98	55.724	Pygocentrus_nattereri
ENSBTAG00000000439	SFSWAP	100	87.298	ENSRNOG00000000931	Sfswap	100	87.000	Rattus_norvegicus
ENSBTAG00000000439	SFSWAP	100	83.966	ENSRBIG00000036330	SFSWAP	100	84.599	Rhinopithecus_bieti
ENSBTAG00000000439	SFSWAP	100	91.169	ENSRROG00000032001	SFSWAP	100	90.612	Rhinopithecus_roxellana
ENSBTAG00000000439	SFSWAP	100	90.244	ENSSBOG00000026217	SFSWAP	100	91.304	Saimiri_boliviensis_boliviensis
ENSBTAG00000000439	SFSWAP	92	83.220	ENSSHAG00000014232	SFSWAP	100	83.787	Sarcophilus_harrisii
ENSBTAG00000000439	SFSWAP	96	57.247	ENSSFOG00015000766	sfswap	97	57.712	Scleropages_formosus
ENSBTAG00000000439	SFSWAP	78	60.000	ENSSMAG00000018718	sfswap	83	59.486	Scophthalmus_maximus
ENSBTAG00000000439	SFSWAP	91	58.981	ENSSDUG00000021680	sfswap	85	58.174	Seriola_dumerili
ENSBTAG00000000439	SFSWAP	91	59.249	ENSSLDG00000010835	sfswap	85	58.038	Seriola_lalandi_dorsalis
ENSBTAG00000000439	SFSWAP	82	92.784	ENSSARG00000000424	SFSWAP	85	92.784	Sorex_araneus
ENSBTAG00000000439	SFSWAP	87	75.212	ENSSPUG00000010272	SFSWAP	99	76.277	Sphenodon_punctatus
ENSBTAG00000000439	SFSWAP	75	61.527	ENSSPAG00000014310	sfswap	74	81.818	Stegastes_partitus
ENSBTAG00000000439	SFSWAP	100	95.869	ENSSSCG00000009744	SFSWAP	100	95.869	Sus_scrofa
ENSBTAG00000000439	SFSWAP	97	78.393	ENSTGUG00000004623	SFSWAP	99	78.936	Taeniopygia_guttata
ENSBTAG00000000439	SFSWAP	55	89.199	ENSTBEG00000004983	-	67	89.199	Tupaia_belangeri
ENSBTAG00000000439	SFSWAP	93	95.333	ENSTTRG00000013478	SFSWAP	90	100.000	Tursiops_truncatus
ENSBTAG00000000439	SFSWAP	100	90.476	ENSUAMG00000016807	SFSWAP	100	90.899	Ursus_americanus
ENSBTAG00000000439	SFSWAP	91	85.164	ENSUMAG00000002957	SFSWAP	91	87.365	Ursus_maritimus
ENSBTAG00000000439	SFSWAP	59	94.574	ENSVPAG00000010479	-	74	94.309	Vicugna_pacos
ENSBTAG00000000439	SFSWAP	100	93.122	ENSVVUG00000010753	SFSWAP	100	92.804	Vulpes_vulpes
ENSBTAG00000000439	SFSWAP	96	65.568	ENSXETG00000009350	sfswap	98	61.900	Xenopus_tropicalis
ENSBTAG00000000439	SFSWAP	80	60.369	ENSXMAG00000009020	sfswap	82	59.264	Xiphophorus_maculatus